Sylvia atricapilla (blackcap): 136364304
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Entry
136364304 CDS
T10263
Symbol
RET
Name
(RefSeq) proto-oncogene tyrosine-protein kinase receptor Ret
KO
K05126
proto-oncogene tyrosine-protein kinase Ret [EC:
2.7.10.1
]
Organism
sati
Sylvia atricapilla (blackcap)
Pathway
sati04010
MAPK signaling pathway
sati04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
136364304 (RET)
04020 Calcium signaling pathway
136364304 (RET)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sati01001
]
136364304 (RET)
Enzymes [BR:
sati01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
136364304 (RET)
Protein kinases [BR:
sati01001
]
Receptor tyrosine kinases (RTK)
RET family
136364304 (RET)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
RET_CLD3
Pkinase
RET_CLD4
RET_CRD
Cadherin
RET_CLD1
Cadherin_FAT4_N
RIO1
Pkinase_fungal
ABC1
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
136364304
NCBI-ProteinID:
XP_066180253
LinkDB
All DBs
Position
8:24929540..24960356
Genome browser
AA seq
966 aa
AA seq
DB search
MLSVGNWMPLSKVMLYVFLSSHPFQEKECDSATRTTVFLSLINATAPACSSLTARQLCFT
EMDLSFHIKENKPPGTFHQLQLPSVHHLCQNLSISYKLLAAEGVPFRYNENTTGVRVTQS
LDREERERYELIAKCTVREGFREMQVEVPFLVNVLDEDDSPPFLPNGTDTADAVVEFNRK
EGTVLSTLTVYDADTTPIYPLESSRKKYTGTIITDDPWISETFRVEHIFDEIHFSPNGSQ
VRGTRHEYKLVLNKSISVTEHRSFQLDVLVNDTEFQGPERSVMLHFNVSILPVSIQFSNI
TYQFTVNRNAERFAQIGKICIENCMKFRGVNITYKLLSPNTSCYPVSILQGREDKFGSLY
VNDSSVLRKPECKEIQYTVQATDRQSRKHTKTLLTVVLEGTLLKKEEDCPDSCAISKHRA
ECEECGGLGVLTGRCQWRQGSGKGITTNYSTCTPSIKTCPDGICDAVEGRDPAVCPQDCT
SGNIIGGHGKGIGNLGIKSGHGICYCFPRQNCYCEKDDIKEQLCDEVCKTVITGAVVLCF
VISVLVSFYCIHRYHKNAPKAPIASAEMTFRRPAQSYPISYSSSNVRRPSLDSMENQVSV
DTFKIPEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASQ
SELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLYLIVEYAKYGSLRSFLRESRKVGPSY
VGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGR
KMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVT
LGGNPYPGIAPERLFNLLKTGYRMERPENCSEEMYNLMLRCWKQEPDKRPTFTEISKELE
KMMVKSRDYLDLAASTPSDSLLYDDGLSEEETPLVDCNNAPLPRTLPSTWIENKLYGRIS
HAFTRF
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgctgtctgtaggaaattggatgccgttatccaaggtgatgctgtacgtcttcctttca
tcccaccctttccaagagaaggaatgtgactccgctacacgcaccacagttttcctctct
ttgatcaatgctactgccccagcttgcagttccctgacagcaaggcagctttgcttcaca
gagatggatctctcctttcacatcaaggagaataaaccacctggtacatttcatcagctc
cagttaccctcagttcatcatctgtgtcagaatctcagcatttcctacaaattgcttgca
gctgagggtgttcccttccggtacaacgagaacaccaccggtgtgcgggtgacacagagc
ctggatcgggaggagagggagcgatacgagctcatcgccaagtgcaccgtcagagaggga
ttcagggagatgcaggttgaggtgcctttcctggtgaacgtgttggatgaagatgactct
cctcccttccttcccaatggcactgatactgcagatgctgtcgtggagttcaacaggaaa
gagggcactgttctctccacgctgactgtgtacgatgcagacaccacacctatttatccc
cttgaaagcagcagaaagaaatacacaggaaccatcattactgacgatccctggatcagt
gaaacgttccgtgtagagcacatctttgatgaaatccacttcagcccaaatggcagccaa
gtgagggggactcggcacgagtacaagctggtactgaataaaagcatttcagtcacagag
catcgttccttccagctggatgttctggtgaatgacacagaatttcagggcccagaaaga
tcagtgatgcttcatttcaatgtctccatcctccctgtcagcattcagttttcaaacatc
acttaccagttcacagtgaacagaaatgccgaacgcttcgcacagataggaaagatctgc
attgaaaactgcatgaaattccgtggtgtaaacatcacctacaagttgctgtcccccaac
accagctgctatcctgtcagcattctgcaaggccgagaggacaaatttgggagcctctat
gtgaatgattcctctgtgctgcgcaaacctgagtgcaaggaaatacaatacactgttcaa
gctacagacaggcagagcaggaaacacaccaaaaccctcctcactgtcgtcctggaaggg
actcttttaaaaaaagaagaagactgccctgactcttgtgctataagtaagcaccgtgct
gaatgtgaagagtgtggtggcctgggagtgctaacaggaagatgccagtggagacaaggg
agtgggaaagggatcaccacaaattattccacgtgcaccccgagcatcaagacttgtccg
gatggcatctgtgatgcggtggagggcagagacccggctgtgtgcccccaagactgcaca
agtggaaacattattggtggccatgggaagggcattggaaatcttggaattaagtcagga
catgggatttgttactgcttcccaagacagaactgttattgtgagaaagatgatatcaaa
gagcaactgtgcgatgaggtgtgcaagactgtgatcacaggggcagtggtgctgtgtttt
gtcatctcggtgctggtttccttctactgcatccaccgttaccacaagaacgccccgaag
gcgcccatcgcctcggccgagatgacgttccggcgcccggcccagtcctaccccatcagc
tactcctccagcaatgtccgccggccgtccctggattccatggagaaccaggtgtccgtg
gacaccttcaaaatcccagaagatccaaagtgggaattccctcggaagaacctggttctg
ggcaagactcttggagaaggagagtttggaaaggtcgtcaaggcgacagcgttccgactc
aagggaagggccggatataccactgtggcagtgaaaatgttaaaagaaaatgcttcccag
agtgagctgcgagatctcctgtcagagttcaaccttttgaaacaagtcaaccatcctcat
gtcatcaaactttatggagcctgcagtcaagatggcccactgtatttaattgtggaatac
gccaagtacggctccttgcgcagtttcctcagggaaagtcggaaagtcggcccgagctac
gtgggcagtgatggcaacaggaattccagttatttggataaccctgatgagagagcctta
acgatgggagacctgatctcgtttgcctggcagatatcccgagggatgcagtaccttgcc
gagatgaagctggtgcatcgggatttagcagccaggaacgtgttggtggcagaagggcgc
aaaatgaagatttctgattttggcctctcccgtgatgtttatgaagaagattcgtatgta
aagaggagcaagggtcgaatccctgtgaaatggatggccatagagtccctatttgaccat
atctacacaacacaaagtgacgtatggtcatttggagttctgctatgggagatcgttact
ttaggaggcaatccttacccaggtattgctcctgaaagactcttcaacctcctaaaaaca
ggctacaggatggagagaccagaaaactgcagtgaagaaatgtacaacctcatgttgcgc
tgttggaagcaagagcctgataaaagaccaacatttactgagatcagcaaggagctagag
aagatgatggtgaagagtagggactacttagaccttgcagcttccacaccctccgattcc
ctactgtacgatgatgggctctcagaagaggagacacctctcgtggactgtaataatgct
cccctccctcgaaccctcccttccacatggattgaaaacaaactctatggtagaatttca
catgcatttactagattctag
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