Sylvia atricapilla (blackcap): 136364894
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Entry
136364894 CDS
T10263
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04514
Cell adhesion molecules
sati04520
Adherens junction
sati04910
Insulin signaling pathway
Brite
Enzymes [BR:
sati01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
136364894 (PTPRF)
Protein phosphatases and associated proteins [BR:
sati01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
136364894 (PTPRF)
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Other DBs
NCBI-GeneID:
136364894
NCBI-ProteinID:
XP_066181138
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Position
9:complement(15091590..15468063)
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AA seq
1912 aa
AA seq
DB search
MVPNFCIPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSNHE
VMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANYTCVAIS
SLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPKSLEGQ
FQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPPLKVQA
RMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGSLITGT
TYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQERITK
YELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTVEARTAQ
STPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKHVVDGIG
REHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEVESVNST
AIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDSVDHETV
IGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTALIQWHPP
KEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNRAGPGEE
FEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRDINSQQD
LVNITKDTSITLTNLKPDTTYDIKVRARTSKGAGPLSPSIQSRTMPVEQVFAKNFRVNAV
MKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVLMNRGSS
AGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVVPADQST
STLTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFTLGDEKN
YKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPEMLWVMG
PVLAVILIIIIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGA
SVPCCPNISSMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVN
KPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFW
RMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGAETYGMIQVTLLDTVELATYTVRTFAL
CKNGSNEKTELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPTDAGPMVVHCSAGVGRT
GCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEASTCGTTEV
PARNLCAHIQKLSQVLPGESVTSMELEFKMLASSKAHTSRFISANLPCNKFKNRLVNIMP
YELTRVCLQPIRGVEGSDYINASFIDGYRHQKAYIATQGPLAETTEDFWRMLWEHNSTIV
VMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTI
RQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIV
LERMRYEGVVDIFQMVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcatcccagtactcactgtgccagcagccatcctctgctgtttg
atgctgcctttagcaggagcggacagcaagccaacgtttatgaaggctcctgaagatcag
attggcatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacgtggatgaagaaggggaagaaagtcagttctcagcggtttgaggttatcgag
tttgatgatggatcaggatcagttctgcggatacagccgctgcgtgttcatcgagatgaa
gcgatctatgagtgcacagccaccaacagtgtgggggagattaacacaagtgccaagtta
acagtgttagaagaagaccacctcccagctggcttcccaaccattgacatgggcccgcag
ctgaaggtggtggaaaaggcccgcacagccacgatgctctgtgctgccagtggtaaccct
gaccccgaaatctcctggttcaaggatttcctgcccgtcgacactgcaaccagcaatggg
cgaatcaagcagctccgctcgggagctctgcaaatagagaacagtgaggagtcagaccaa
ggcaaatatgaatgtgttgcaaccaacagcgcaggaacccgctactctgccccagccaac
ctttatgttcgagtgcggcgtgttgctcctcgattctctatccctccaagcaaccacgag
gtgatgcctggggggagcgtgaacctcacgtgcgtggcagtaggtgctccaatgccctac
gtgaagtggatggctggagtggaggagctgaccaaagaggatgagatgcccgtcggtagg
aatgtcctggagctgaataacatcatgcagtctgccaactacacctgcgtggccatctcg
tcccttggcatgatcgaagccacagcccagatcactgtcaaagcactgccaaaacctcca
acagagccattagtgactgaaacgacagctaccagcgtgaccctcacctgggattcaggc
aactctgaccccatttcatattacgtcatccagtacaagcccaaatccctggagggccag
ttccaggaggtggatggtgtggcaaccacccgctacagcataggtgggctcagccccttc
tcagagtatgagttccgggtcatcgcagtcaacaacatcggcaggggtccccccagtgag
ctggtcgaggcccggacaggagagcaagctccttcaagtccacccctcaaagtgcaggca
cggatgctgagcgccagcaccatgctggtgcagtgggagcagccagaggagcccaatgga
cagatccggggttaccgcgtgtactacaccactgacccccacctgcctttgagcatgtgg
cagaaacacaacactgatgacagccacctcaccactgtgggcagcctcatcacaggcacc
acctacagcatccgtgtcctggccttcacttctgtgggtgacgggcccccctcggacatc
atccaggtcaaaacacagcaaggagttcctgcccagccagctgacttccaggcagaagca
gagtctgatacccgcatcctgttgacatggctgcccgcctctcaggaacgcattactaaa
tatgagctgctctactgggaaggggaggatggcactcagcaaaaggtggagtttgaccca
acctcctcatatgccgtggaaggtctcaaaccagacacattgtataagttccgtctgggt
gcccgctcagagctgggggtaggagtttacacccccacggtggaagccagaactgcccaa
tccaccccctccgccccaccccaagaagtcgagtgtgtaagcaccagctccaccaccatc
cgggtaagttgggtgccaccgcccgcccagagccgcaatggggtcatcacccagtactcc
attgcctaccaggcagtggaaggagatgacaacaccaagcatgtggtggatggcattgga
cgggagcattccagctgggagatcaaggacctggagaaatggaccgaatacaaggtgtgg
gtaagggctcacacggatgtggggccaggaccggagagcatccccgtccacgtgcgcact
gacgaggatgtgcccagtgccccaccgcgaaaggtagaggtggagtctgtgaactcgact
gccatccgggtgagctggaagctgcccatctccaacaagcagcatgggcagatccgcggg
tatcaggttacctatgtgaagctggaaaacaacgagccccgcgggcagccggtgatcaag
gacgtcatgctgtcagaagcacagtggagagctgaggactccgtcgaccatgagacagtc
attggaggcctgctgccagaaaccacctactccgtcacagttgctgcctacaccaccaaa
ggagatggtgcccgcagcaagcccaaagtcatcaccaccacaggggcagtcccggggaag
cccaccatgatgattagcacgacagccatgaacacagccctcatccagtggcacccaccc
aaggagatggtaggggagctgctgggttaccggctgcagtacagacgtctggatgaggaa
aaaatgaacacaatagacttcgggaagagagaccatcactacacagtgacaaacctgcac
aagggggccacgtacctcttcaaattgtctgccaagaacagagctggcccgggagaggag
tttgagaaggagatcacaactgccgaagatgtgccaagcggcttcccacagaacctgcgt
gtggtgggtctcaccacctccaccacagaagttgcctgggaccccccggtcttggcagaa
aggaacggcaagatcgtcaactacacggtggtatacagggacataaatagccagcaggac
ctggttaacatcaccaaggacacgagtatcactttgacaaatttgaaacctgataccact
tacgacatcaaagtgagggcccgcaccagtaagggggctgggccactgagccccagcatc
cagtcccggaccatgcctgtagagcaagtgtttgctaagaacttccgtgtcaatgccgtc
atgaaaacatctgtgttgctgagctgggaagtgcctgactcctataaatctgcagtgcct
tttaagattctgtacaatagccagagtgtggaggtggacggccactcaatgaagaagctc
ataagtgacctccagccagacacggactattcttttgtgctaatgaaccgtgggagcagt
gcaggggggctccagcacctcgtctcaatccgcactgctcctgatgtcttgcaaagcaaa
cccatcgccacaaacaagtacatacaggagggaaaattcacgctaactcttcccaaagtg
cagaccactgtgccagttcggtggtactacatcgtggttgtgccagcagaccagagcacc
agcaccctgactgctcggtggcggacgcctgatgagatggagctggaccagctgctggag
gccataagccaagggagtcagagcaggcggcagcgacgccaggcagacagactcaagccc
tacattgctgctcaagtggatgtgctgcccgagaccttcaccctgggggacgagaagaac
tacaaaggtttctacaacaagcctctgtctcaagacctgagctatcgctgcttcgtgctg
gcctcactggaggatggggacacgaagagatatgcagccagcccctactcggatgagatt
gtgatggaagtggcatcagcaaagcagcaggatgaaccagagatgctgtgggtgatggga
cccgtcctggctgtgatactaatcatcatcattgtcattgccatacttctcttcaaaagg
aaaagggcacattccccttcttccaaggatgagcattccattggcctgaaggactcactc
ttggcccactcatctgacccagttgagatgaggcggctcaactaccagactccaggtgcc
agtgtcccctgttgcccgaatatctcaagcatgcgtgaccacccccccatccccgtgacc
gacctcgctgacaacatcgaccgcctcaaggccaacgatgggctgaagttctcccaggag
tacgagtccattgatcctgggcagcagttcacctgggagaactccaacctggaagtgaat
aaaccgaaaaaccgctatgcaaacgtgatagcctatgaccactcgcgtgtcatcctgact
tccattgatggagtcccaggcagtgattacatcaatgccaattacattgatgggtatcgg
aagcagaatgcctacatcgccacgcagggaccgctgccagaaaccctcagcgacttctgg
aggatggtgtgggaacagagaacagcaactattgtcatgatgaccaggctggaggagaag
tccagggtgaagtgtgaccagtactggccgagccggggtgcggaaacctatgggatgatc
caggtgaccctgctggatacagtcgagctggcgacctacaccgtccgcacctttgcgctg
tgcaagaatggctccaatgagaagacagagctgcgacagttccagttcatggcttggcct
gatcacggggtcccagaataccccaccccaatcctcgctttcctgcgacgggtcaaggcc
tgtaacccaacagatgctgggcccatggttgtgcattgcagtgctggcgtgggccgaacc
ggctgcttcattgtcatcgatgccatgctggagcggatgaagcacgagaagaccgtggac
atctacggccacgtgacgtgcatgcgctcccagcgcaactacatggtgcagacagaggac
cagtacatcttcatccacgaggccttgctggaggcttccacgtgtggcactaccgaggtg
cccgcacgcaacctctgcgcccacatccagaagctgagccaggtgctaccaggcgagagt
gttacttcaatggaactggaattcaagatgctggccagttccaaagcacatacctcacgt
ttcatcagtgccaacctcccgtgcaacaaattcaagaaccgccttgtgaacatcatgccg
tatgagctgacgagagtctgcctgcagcccatccggggtgtcgagggctctgactacatc
aatgccagcttcatagatggctacaggcatcagaaggcctacatcgccacgcagggacca
ctggccgagaccacggaggatttctggcggatgctctgggagcacaactccaccattgtg
gtgatgttgacaaagctgcgtgagatgggccgggagaagtgccatcagtactggcctgca
gagcgctctgcccggtaccagtattttgtggtagaccccatggcagagtacaacatgcca
cagtacatcctccgggagttcaaggtgacagatgccagggacggccagtcacggaccatc
cgccagttccagttcacagactggcctgagcagggagtgccaaagacaggagagggtttc
attgacttcattgggcaggtgcacaagaccaaggagcagtttgggcaggatgggcccatc
acggtgcactgcagtgctggggttgggcgcactggcgtgttcatcacactcagcatcgtg
ctggagaggatgcgctacgagggtgtggtggacatattccagatggtgaagaccttgcgg
acgcagcggccggccatggtgcagacagaggaccagtaccagctgtgctacagagcagca
ctggagtaccttggcagcttcgaccactatgcaacgtaa
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