Sylvia atricapilla (blackcap): 136364894
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Entry
136364894 CDS
T10263
Symbol
PTPRF
Name
(RefSeq) receptor-type tyrosine-protein phosphatase F isoform X1
KO
K05695
receptor-type tyrosine-protein phosphatase F [EC:
3.1.3.48
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04514
Cell adhesion molecule (CAM) interaction
sati04517
IgSF CAM signaling
sati04520
Adherens junction
sati04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
136364894 (PTPRF)
04517 IgSF CAM signaling
136364894 (PTPRF)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
136364894 (PTPRF)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
136364894 (PTPRF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sati01009
]
136364894 (PTPRF)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sati04515
]
136364894 (PTPRF)
Enzymes [BR:
sati01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
136364894 (PTPRF)
Protein phosphatases and associated proteins [BR:
sati01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
136364894 (PTPRF)
Cell adhesion molecules [BR:
sati04515
]
Immunoglobulin superfamily
Type II RPTP family
136364894 (PTPRF)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3_VIN3
Fn3_ROS1
Ig_2
ig
Fn3_PBP1
fn3_2
Interfer-bind
Tc-R-P
PTP-SAK
Ig_VEGFR-1-like_5th
DSPc
V-set
Ig_PDGFR_d4
Y_phosphatase3
C2-set_2
fn3_SORL1
PTPlike_phytase
PTP-NADK
Ig_5
Fn3_PTPRU
Insulin_TMD
DUF3377
ICAM_N
TMEM154
Motif
Other DBs
NCBI-GeneID:
136364894
NCBI-ProteinID:
XP_066181138
LinkDB
All DBs
Position
9:complement(15091590..15468063)
Genome browser
AA seq
1912 aa
AA seq
DB search
MVPNFCIPVLTVPAAILCCLMLPLAGADSKPTFMKAPEDQIGISGGVASFVCQATGEPKP
RITWMKKGKKVSSQRFEVIEFDDGSGSVLRIQPLRVHRDEAIYECTATNSVGEINTSAKL
TVLEEDHLPAGFPTIDMGPQLKVVEKARTATMLCAASGNPDPEISWFKDFLPVDTATSNG
RIKQLRSGALQIENSEESDQGKYECVATNSAGTRYSAPANLYVRVRRVAPRFSIPPSNHE
VMPGGSVNLTCVAVGAPMPYVKWMAGVEELTKEDEMPVGRNVLELNNIMQSANYTCVAIS
SLGMIEATAQITVKALPKPPTEPLVTETTATSVTLTWDSGNSDPISYYVIQYKPKSLEGQ
FQEVDGVATTRYSIGGLSPFSEYEFRVIAVNNIGRGPPSELVEARTGEQAPSSPPLKVQA
RMLSASTMLVQWEQPEEPNGQIRGYRVYYTTDPHLPLSMWQKHNTDDSHLTTVGSLITGT
TYSIRVLAFTSVGDGPPSDIIQVKTQQGVPAQPADFQAEAESDTRILLTWLPASQERITK
YELLYWEGEDGTQQKVEFDPTSSYAVEGLKPDTLYKFRLGARSELGVGVYTPTVEARTAQ
STPSAPPQEVECVSTSSTTIRVSWVPPPAQSRNGVITQYSIAYQAVEGDDNTKHVVDGIG
REHSSWEIKDLEKWTEYKVWVRAHTDVGPGPESIPVHVRTDEDVPSAPPRKVEVESVNST
AIRVSWKLPISNKQHGQIRGYQVTYVKLENNEPRGQPVIKDVMLSEAQWRAEDSVDHETV
IGGLLPETTYSVTVAAYTTKGDGARSKPKVITTTGAVPGKPTMMISTTAMNTALIQWHPP
KEMVGELLGYRLQYRRLDEEKMNTIDFGKRDHHYTVTNLHKGATYLFKLSAKNRAGPGEE
FEKEITTAEDVPSGFPQNLRVVGLTTSTTEVAWDPPVLAERNGKIVNYTVVYRDINSQQD
LVNITKDTSITLTNLKPDTTYDIKVRARTSKGAGPLSPSIQSRTMPVEQVFAKNFRVNAV
MKTSVLLSWEVPDSYKSAVPFKILYNSQSVEVDGHSMKKLISDLQPDTDYSFVLMNRGSS
AGGLQHLVSIRTAPDVLQSKPIATNKYIQEGKFTLTLPKVQTTVPVRWYYIVVVPADQST
STLTARWRTPDEMELDQLLEAISQGSQSRRQRRQADRLKPYIAAQVDVLPETFTLGDEKN
YKGFYNKPLSQDLSYRCFVLASLEDGDTKRYAASPYSDEIVMEVASAKQQDEPEMLWVMG
PVLAVILIIIIVIAILLFKRKRAHSPSSKDEHSIGLKDSLLAHSSDPVEMRRLNYQTPGA
SVPCCPNISSMRDHPPIPVTDLADNIDRLKANDGLKFSQEYESIDPGQQFTWENSNLEVN
KPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETLSDFW
RMVWEQRTATIVMMTRLEEKSRVKCDQYWPSRGAETYGMIQVTLLDTVELATYTVRTFAL
CKNGSNEKTELRQFQFMAWPDHGVPEYPTPILAFLRRVKACNPTDAGPMVVHCSAGVGRT
GCFIVIDAMLERMKHEKTVDIYGHVTCMRSQRNYMVQTEDQYIFIHEALLEASTCGTTEV
PARNLCAHIQKLSQVLPGESVTSMELEFKMLASSKAHTSRFISANLPCNKFKNRLVNIMP
YELTRVCLQPIRGVEGSDYINASFIDGYRHQKAYIATQGPLAETTEDFWRMLWEHNSTIV
VMLTKLREMGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTI
RQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSAGVGRTGVFITLSIV
LERMRYEGVVDIFQMVKTLRTQRPAMVQTEDQYQLCYRAALEYLGSFDHYAT
NT seq
5739 nt
NT seq
+upstream
nt +downstream
nt
atggtgcctaacttctgcatcccagtactcactgtgccagcagccatcctctgctgtttg
atgctgcctttagcaggagcggacagcaagccaacgtttatgaaggctcctgaagatcag
attggcatttctggaggagtggcctcttttgtgtgtcaggcaacaggagagcccaaacct
cgtatcacgtggatgaagaaggggaagaaagtcagttctcagcggtttgaggttatcgag
tttgatgatggatcaggatcagttctgcggatacagccgctgcgtgttcatcgagatgaa
gcgatctatgagtgcacagccaccaacagtgtgggggagattaacacaagtgccaagtta
acagtgttagaagaagaccacctcccagctggcttcccaaccattgacatgggcccgcag
ctgaaggtggtggaaaaggcccgcacagccacgatgctctgtgctgccagtggtaaccct
gaccccgaaatctcctggttcaaggatttcctgcccgtcgacactgcaaccagcaatggg
cgaatcaagcagctccgctcgggagctctgcaaatagagaacagtgaggagtcagaccaa
ggcaaatatgaatgtgttgcaaccaacagcgcaggaacccgctactctgccccagccaac
ctttatgttcgagtgcggcgtgttgctcctcgattctctatccctccaagcaaccacgag
gtgatgcctggggggagcgtgaacctcacgtgcgtggcagtaggtgctccaatgccctac
gtgaagtggatggctggagtggaggagctgaccaaagaggatgagatgcccgtcggtagg
aatgtcctggagctgaataacatcatgcagtctgccaactacacctgcgtggccatctcg
tcccttggcatgatcgaagccacagcccagatcactgtcaaagcactgccaaaacctcca
acagagccattagtgactgaaacgacagctaccagcgtgaccctcacctgggattcaggc
aactctgaccccatttcatattacgtcatccagtacaagcccaaatccctggagggccag
ttccaggaggtggatggtgtggcaaccacccgctacagcataggtgggctcagccccttc
tcagagtatgagttccgggtcatcgcagtcaacaacatcggcaggggtccccccagtgag
ctggtcgaggcccggacaggagagcaagctccttcaagtccacccctcaaagtgcaggca
cggatgctgagcgccagcaccatgctggtgcagtgggagcagccagaggagcccaatgga
cagatccggggttaccgcgtgtactacaccactgacccccacctgcctttgagcatgtgg
cagaaacacaacactgatgacagccacctcaccactgtgggcagcctcatcacaggcacc
acctacagcatccgtgtcctggccttcacttctgtgggtgacgggcccccctcggacatc
atccaggtcaaaacacagcaaggagttcctgcccagccagctgacttccaggcagaagca
gagtctgatacccgcatcctgttgacatggctgcccgcctctcaggaacgcattactaaa
tatgagctgctctactgggaaggggaggatggcactcagcaaaaggtggagtttgaccca
acctcctcatatgccgtggaaggtctcaaaccagacacattgtataagttccgtctgggt
gcccgctcagagctgggggtaggagtttacacccccacggtggaagccagaactgcccaa
tccaccccctccgccccaccccaagaagtcgagtgtgtaagcaccagctccaccaccatc
cgggtaagttgggtgccaccgcccgcccagagccgcaatggggtcatcacccagtactcc
attgcctaccaggcagtggaaggagatgacaacaccaagcatgtggtggatggcattgga
cgggagcattccagctgggagatcaaggacctggagaaatggaccgaatacaaggtgtgg
gtaagggctcacacggatgtggggccaggaccggagagcatccccgtccacgtgcgcact
gacgaggatgtgcccagtgccccaccgcgaaaggtagaggtggagtctgtgaactcgact
gccatccgggtgagctggaagctgcccatctccaacaagcagcatgggcagatccgcggg
tatcaggttacctatgtgaagctggaaaacaacgagccccgcgggcagccggtgatcaag
gacgtcatgctgtcagaagcacagtggagagctgaggactccgtcgaccatgagacagtc
attggaggcctgctgccagaaaccacctactccgtcacagttgctgcctacaccaccaaa
ggagatggtgcccgcagcaagcccaaagtcatcaccaccacaggggcagtcccggggaag
cccaccatgatgattagcacgacagccatgaacacagccctcatccagtggcacccaccc
aaggagatggtaggggagctgctgggttaccggctgcagtacagacgtctggatgaggaa
aaaatgaacacaatagacttcgggaagagagaccatcactacacagtgacaaacctgcac
aagggggccacgtacctcttcaaattgtctgccaagaacagagctggcccgggagaggag
tttgagaaggagatcacaactgccgaagatgtgccaagcggcttcccacagaacctgcgt
gtggtgggtctcaccacctccaccacagaagttgcctgggaccccccggtcttggcagaa
aggaacggcaagatcgtcaactacacggtggtatacagggacataaatagccagcaggac
ctggttaacatcaccaaggacacgagtatcactttgacaaatttgaaacctgataccact
tacgacatcaaagtgagggcccgcaccagtaagggggctgggccactgagccccagcatc
cagtcccggaccatgcctgtagagcaagtgtttgctaagaacttccgtgtcaatgccgtc
atgaaaacatctgtgttgctgagctgggaagtgcctgactcctataaatctgcagtgcct
tttaagattctgtacaatagccagagtgtggaggtggacggccactcaatgaagaagctc
ataagtgacctccagccagacacggactattcttttgtgctaatgaaccgtgggagcagt
gcaggggggctccagcacctcgtctcaatccgcactgctcctgatgtcttgcaaagcaaa
cccatcgccacaaacaagtacatacaggagggaaaattcacgctaactcttcccaaagtg
cagaccactgtgccagttcggtggtactacatcgtggttgtgccagcagaccagagcacc
agcaccctgactgctcggtggcggacgcctgatgagatggagctggaccagctgctggag
gccataagccaagggagtcagagcaggcggcagcgacgccaggcagacagactcaagccc
tacattgctgctcaagtggatgtgctgcccgagaccttcaccctgggggacgagaagaac
tacaaaggtttctacaacaagcctctgtctcaagacctgagctatcgctgcttcgtgctg
gcctcactggaggatggggacacgaagagatatgcagccagcccctactcggatgagatt
gtgatggaagtggcatcagcaaagcagcaggatgaaccagagatgctgtgggtgatggga
cccgtcctggctgtgatactaatcatcatcattgtcattgccatacttctcttcaaaagg
aaaagggcacattccccttcttccaaggatgagcattccattggcctgaaggactcactc
ttggcccactcatctgacccagttgagatgaggcggctcaactaccagactccaggtgcc
agtgtcccctgttgcccgaatatctcaagcatgcgtgaccacccccccatccccgtgacc
gacctcgctgacaacatcgaccgcctcaaggccaacgatgggctgaagttctcccaggag
tacgagtccattgatcctgggcagcagttcacctgggagaactccaacctggaagtgaat
aaaccgaaaaaccgctatgcaaacgtgatagcctatgaccactcgcgtgtcatcctgact
tccattgatggagtcccaggcagtgattacatcaatgccaattacattgatgggtatcgg
aagcagaatgcctacatcgccacgcagggaccgctgccagaaaccctcagcgacttctgg
aggatggtgtgggaacagagaacagcaactattgtcatgatgaccaggctggaggagaag
tccagggtgaagtgtgaccagtactggccgagccggggtgcggaaacctatgggatgatc
caggtgaccctgctggatacagtcgagctggcgacctacaccgtccgcacctttgcgctg
tgcaagaatggctccaatgagaagacagagctgcgacagttccagttcatggcttggcct
gatcacggggtcccagaataccccaccccaatcctcgctttcctgcgacgggtcaaggcc
tgtaacccaacagatgctgggcccatggttgtgcattgcagtgctggcgtgggccgaacc
ggctgcttcattgtcatcgatgccatgctggagcggatgaagcacgagaagaccgtggac
atctacggccacgtgacgtgcatgcgctcccagcgcaactacatggtgcagacagaggac
cagtacatcttcatccacgaggccttgctggaggcttccacgtgtggcactaccgaggtg
cccgcacgcaacctctgcgcccacatccagaagctgagccaggtgctaccaggcgagagt
gttacttcaatggaactggaattcaagatgctggccagttccaaagcacatacctcacgt
ttcatcagtgccaacctcccgtgcaacaaattcaagaaccgccttgtgaacatcatgccg
tatgagctgacgagagtctgcctgcagcccatccggggtgtcgagggctctgactacatc
aatgccagcttcatagatggctacaggcatcagaaggcctacatcgccacgcagggacca
ctggccgagaccacggaggatttctggcggatgctctgggagcacaactccaccattgtg
gtgatgttgacaaagctgcgtgagatgggccgggagaagtgccatcagtactggcctgca
gagcgctctgcccggtaccagtattttgtggtagaccccatggcagagtacaacatgcca
cagtacatcctccgggagttcaaggtgacagatgccagggacggccagtcacggaccatc
cgccagttccagttcacagactggcctgagcagggagtgccaaagacaggagagggtttc
attgacttcattgggcaggtgcacaagaccaaggagcagtttgggcaggatgggcccatc
acggtgcactgcagtgctggggttgggcgcactggcgtgttcatcacactcagcatcgtg
ctggagaggatgcgctacgagggtgtggtggacatattccagatggtgaagaccttgcgg
acgcagcggccggccatggtgcagacagaggaccagtaccagctgtgctacagagcagca
ctggagtaccttggcagcttcgaccactatgcaacgtaa
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integrated database retrieval system
