Sylvia atricapilla (blackcap): 136366081
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Entry
136366081 CDS
T10263
Symbol
IARS1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
136366081 (IARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sati01007
]
136366081 (IARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sati03016
]
136366081 (IARS1)
Enzymes [BR:
sati01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
136366081 (IARS1)
Amino acid related enzymes [BR:
sati01007
]
Aminoacyl-tRNA synthetase
Class I (U)
136366081 (IARS1)
Transfer RNA biogenesis [BR:
sati03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
136366081 (IARS1)
Prokaryotic type
Other AARSs
136366081 (IARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
Plectin_PPL
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
136366081
NCBI-ProteinID:
XP_066183011
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All DBs
Position
11:17380993..17473171
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AA seq
1262 aa
AA seq
DB search
MVQQVPENINFPNEEEKILTLWKNLNCFKECLKQSKNRPRFNFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIKGPEDVAKMGIEAYNKEC
RGIVMRYAKEWEFSVTRLGRWIDFENDYKTLYPEFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVTVSFPLEEDPSVSLVAWTTTPWTLPSNLALCVNP
ELQYVKLRDKATGKIYILMESRLVALYKSDSEYQILDRFPGIVLKGKKYKPLFEYFIQCK
EKGAFTVVVDGYVKEEEGTGVVHQAPYFGADDYRVCMDFNIIQKDSVPVCPVDASGCFTA
EVADFAGQYVKDADKHIIRWLKEKGRLIHSTTFQHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLENNAQCYWVPDFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSEDLEEVVC
VGSMAELEELSGVKVTDLHRESIDHLTIPSRCGKGSLRRVPEVFDCWFESGSMPYAQVHY
PFENRRELEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGRPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPMHIVNSYGADALRLYLINSPVVRAENLRFKEEGVRDILKDVFLPWYNAY
RFLVQNVQILQHKDEGREFLYNESTVKESNNIMDKWILSFTQSLIQFFKAEMAAYRLYTV
VPRLVKFVDVLTNWYVRMNRRRLKGENGTEDCIMALETLFSVLFSMCRLMAPYTPFITEL
MYQNLKTLIDPASVQEKNTESIHYLMLPQVREDLIDKKIESAVSCLQSVIELGRVIRDRK
TIPVKYPLKEVVVIHQDPEALESIRALEKYVLEELNVRALTLSADKARYGVRLRAEPEHT
VLGRRLKAAFKAVMGAVRELSSEQLERFQETGSIVVEGHELHGEDLRLMYQMTEGSAQFE
AHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKRNLVPTDEITVYYRALPEGEYL
DTVIQQHTEFIFATIKADLKPYPVPTSKEVLLQETTQLKGSELEITLVRGGMCQSVGPAC
AYVNLKVCVNGTEQDGVLLLENPKGDNTLNFTGLIDAVSCIFGLKNSKLTVFNGNTELLN
QTDLLGLSGKTLHVTAGSAPALSSCPSALLCQYINLQLINAKPQECQKGTVGTLLMENPV
GQNGLTYKGLLHETAKVFGLRSRRLKLFLDEALTHEITKDISMKNLNMKTLYVHVIPTTA
EC
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggttcaacaagttccagaaaacataaattttccaaatgaggaagagaagatactgaca
ctctggaagaatcttaattgtttcaaggaatgcctgaagcaatcaaagaacagacctagg
tttaacttctacgatggtcccccatttgccacggggctcccccactatggccacattctt
gctggaaccatcaaagacattgtgaccagatttgctcatcagagtggttttcatgttgac
agaaggtttggctgggattgccatggcttacctgtggaatatgagattgacaagacttta
ggcattaaagggccagaggatgtggccaagatggggattgaagcttataacaaagagtgc
agagggattgtgatgagatacgccaaggagtgggagttcagtgttaccagattaggacgc
tggattgactttgaaaatgactacaaaactctttaccccgagttcatggagtctgtgtgg
tgggttttcaagcagctctatgacaaaggactggtgtatagaggggtcaaggtcatgcct
ttttctactgcatgcaacacccccctgtccaactttgagtcccatcagaactacaaggat
gttcaggatccttcagtgaccgtgagcttcccactggaggaagatccaagtgtttctctt
gttgcctggaccacgactccttggaccttgcccagcaatctggccctttgtgttaaccct
gaactgcagtatgtaaaactgagagataaagccacagggaagatttacattttgatggag
tccaggctggtggcattgtacaaatctgacagtgaatatcagatacttgacaggtttcct
ggtattgttcttaaaggcaagaaatacaaaccactctttgaatattttattcagtgcaaa
gaaaaaggtgcctttaccgtggtagtggatggttatgtgaaggaggaggaaggcacagga
gttgtccatcaggctccctattttggtgctgatgattacagagtctgcatggattttaat
atcattcagaaggactctgtgcctgtgtgtcctgttgatgcatcaggctgcttcacagcc
gaagtggctgactttgctgggcagtatgtgaaggatgcagataagcacatcatcagatgg
ctgaaggagaagggcaggctgatccacagcaccaccttccagcacagctaccccttctgc
tggaggtcagatactccgctgatctacaaagctgtgcccagctggtttgtcagggtggag
cacatggtggagaagttgctggagaacaatgcccagtgctactgggttccggatttcgtg
cgggagaagcgctttgggaactggctgaaggacgcccgggactgggccatctctcggaac
cgctactggggcacccccatccctctgtgggtcagcgaggatttggaagaggtggtatgt
gttggttcaatggcagaactggaggagctgtctggagtgaaagtcacagatctccatcga
gaaagcattgaccatctgaccatcccgtcgcgctgcgggaagggctccctgcgccgcgtg
cccgaggtgtttgactgctggtttgagagcggcagcatgccctacgcccaggtgcactac
ccctttgagaacaggagggagctcgaggacgccttccctgccgacttcatcgctgagggc
attgaccagacacgaggatggttctacactttgctggtgctgtccactgctctttttggg
aggcctcctttcaagaatgtcattgtgaatggccttgtccttgccagtgatggccaaaaa
atgagcaaaaggaagaagaattatcccgatccgatgcacattgtgaacagttacggagct
gatgcactcaggttgtacctgatcaattctcccgtggtgagagcagaaaacctgaggttt
aaggaggagggagtaagggatatcctgaaggatgtgttcctgccctggtacaacgcctat
cgcttcctggtgcagaacgttcagatcctgcagcacaaggatgaggggagagaattcctt
tacaatgagagcacagttaaggagagcaataacatcatggataaatggattctttctttc
acccagtccctcatccagttcttcaaagctgaaatggcagcttacaggctgtacacggtg
gtgcctcggctggtgaagtttgtggatgttctgaccaactggtacgtccgaatgaaccgc
aggaggctcaagggtgagaatgggactgaggattgcattatggccttggaaactttgttt
agtgtcttgttctccatgtgcagactcatggcaccatatactccatttatcactgagctg
atgtaccagaatctgaaaacactcattgatccagcctcagtccaggagaagaacactgag
agcatccactacctcatgcttccccaagtcagggaggatctcatcgacaaaaaaattgag
agtgccgtttcttgtttgcagtctgtgattgagctgggacgagtgatcagagacagaaaa
accatcccagtcaagtatcctttgaaagaagtagttgttatccaccaggatccagaggct
ctggaaagcatcagggctttagagaagtatgtactggaggagctgaacgtgcgggcgctg
acgctgtctgcggacaaggccaggtacggcgtgcgcctgcgggccgagcccgagcacacg
gtgctgggccggcgcctcaaggccgccttcaaggccgtcatgggcgccgtcagggagctg
agcagcgagcagctggagcgcttccaggagacaggcagcattgttgtggaaggacacgaa
ctccatggggaagatctccgtctcatgtatcagatgacagagggatctgcccagtttgag
gcacactctgatgctcaggttttggtgctgctggatgtaaccccagaccagtccatggtg
gatgaaggggttgcccgggaagtgatcaatcgcatccagaagcttcgcaagaagaggaac
ctggtccccacagatgagatcacagtgtactacagggccctgccagagggggaatacctg
gacactgtcatccagcaacacacggagttcatttttgccacaataaaggcagacctgaag
ccttaccctgtgcctacctcaaaggaagttctcctccaggaaacaacccaactgaaggga
tcagagctggaaatcaccctggtcagaggggggatgtgtcagtctgttggcccagcctgt
gcctacgtcaacctcaaagtctgtgtcaatgggacagagcaagatggtgtgttgctgctg
gaaaatccaaaaggagataataccctgaatttcacaggacttatagatgctgtctcctgc
atttttggtctcaaaaattccaaactgacagtttttaatggaaacacagagctgctgaac
cagacagacctgctggggctcagtgggaagactctgcatgtgacagcagggtcagcccct
gccctgtccagctgccccagtgccctgctctgccagtacatcaacctgcagctgatcaat
gcaaagccacaagaatgccagaaaggaacagtgggaactctcctaatggaaaaccctgtc
ggtcagaatggattaacctacaaaggtcttctgcatgagacagcaaaagtttttgggctc
agaagcaggaggctgaagttgttcctggatgaagcactaactcatgagatcacaaaggac
atttctatgaagaacctgaacatgaagaccctctatgttcatgtcatacccaccacagct
gaatgttga
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