Sylvia atricapilla (blackcap): 136366129
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Entry
136366129 CDS
T10263
Symbol
RNF123
Name
(RefSeq) E3 ubiquitin-protein ligase RNF123
KO
K12169
Kip1 ubiquitination-promoting complex protein 1 [EC:
2.3.2.27
]
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sati04121
]
136366129 (RNF123)
Enzymes [BR:
sati01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136366129 (RNF123)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136366129 (RNF123)
Multi subunit type E3
KPC complex
136366129 (RNF123)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-C3HC4_3
zf-RING_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
136366129
NCBI-ProteinID:
XP_066183123
LinkDB
All DBs
Position
11:21746232..21793559
Genome browser
AA seq
1309 aa
AA seq
DB search
MTSRGAGTAFSRKNYRLTTEPEKSKVTGIVNSRLLNDYLHRVFTNADGNQPAAAYRKHLT
FQNLQEHLERLLAEENGSEDSRDQVAEGRLGPSTVVLDHTSGFEGLLLVDDDLLGVIGHS
NFGSIRATTCVYKGKWIYEVLISSQGLMQIGWCTLNCRFNQEEGVGDTPDSYAYDGNRVR
KWNVTTTNYGKSWAAGDIVSCLIDLDEGTIAFCLNGISLGTAFDNITRGTGMAYFPAISL
SFKESVAFNFGSRPLRYPLVEGYRPLQDPPVADLVKARKLLGYLKNVIHIGIDVTEGKLV
EKDTSMWQLQGEPTVLITLAHIFNYFSPLMCKVYLVEDVLMTFLLSILERGGAVEAHPLI
QQLLDLMWLLMEEYEVHECLKRLLISLLRAYRFSPIIPDLGLQIHYLRLTIAVLKHEKSR
KYLLSNVLFDVLRSVVFFYIKSPLRVEEAGLQELIPTTWWPNRFTKEGKESKEVKEESAE
ERLRRRAYERGCQRLKKRIEVVEGLQVQILKLLLNNKDRGGGEASRYIFLNKLRKFLQEN
ASNRANLTVLCPPEYMVCFLHRLIAALRYFWDGHKAKTPAALSSEEAYVPPQLFYNGKVD
YFDLQRLGGLLSHLKKTLKDDLAAKANILIDPAELQAVTMDDLDEDEESATSAAQSQRPS
AALAIGGALARPAWLSSPTLGRANRFLSTAAVSLMNPRRPLGPLEKIKVLTLRVEQRTRE
DIEGTHGNDGLLLGRPPEEPDQPITENSLLEVLDGIVMMYNLCVHQQLGKMVGVSDDVNE
YAMALKDTEEKISRCPKRRRDIHEELLKSQKVFSEKLNHLSRRLAWINVTIYSKEKMQDI
YWLLRVCIRTIEHGDRTGSLFAFMPEFYLSVAMNSYSALKNYFSPVNSMEELPGYEETLM
RLAAILAKHFADSRIVGTDIRDSLMQALASYVCYPHSLRAVERIPEEQRISMMKNLLAPY
EQRPWAQTNWILVRLWRGCGFGYRYTRLPHLLKTKPEDASLPSLQKPCPSTLLQRHMADL
LRSDRDLAPSFLNSVLNQLNWAFSEFIGMIQEIQQAAERLERNFVDSRQLKVCATCFDLS
VSLLRVLEMTVTLAPEIFLDWTRPSSELLLRRLAQLLNQVLNRVTAERNLFDRVVNLRLP
GLESVDHYPILVAVTGILVRLLVDTDVQGTERATAVLLADPCFQLRSIQYLLGHAEPSAL
AAAAPAMEKRHFSLHTYTEYISTEELAKVEKMLNHLSEEFKQAAATTLPTSEEDLCPICY
AHPISAIFRPCSHKSCKACINQHLMNNKDCFFCKATITGVDDFTKPASS
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaagaggtgctgggactgctttctcaaggaagaattacaggctgaccactgag
ccagagaagtccaaggtcacagggatcgtgaacagcaggttgctgaatgattatctgcac
cgagtctttaccaatgctgatgggaaccagcctgcagctgcttacaggaagcacttgaca
ttccagaacctgcaggagcaccttgagcgattgctggcagaggagaatggctctgaagac
agcagagatcaagtagcagagggtcggctggggccctccactgtggtgttggaccacaca
agtggctttgaagggctcctgctggtcgatgatgacttacttggggtgattggccacagt
aactttgggtccatcagggccacaacatgtgtgtataaagggaaatggatttatgaggtg
ctcatctcttcccagggactcatgcagattggctggtgcactctcaactgcagatttaat
caggaggaaggcgttggggacacgccagattcgtatgcctatgatggaaacagggtgcgc
aagtggaacgtaactactacaaactatggcaaatcctgggcagcaggagacatcgtcagc
tgtctgatagaccttgatgagggcaccattgctttctgcttgaatggcatatctctggga
actgcctttgataacatcacaaggggtactggaatggcttatttccctgccatcagcctc
tccttcaaagagtctgttgcttttaacttcggaagccgtccactccgatatcctttggtg
gaaggttaccggcccttgcaagatcctcctgtggcagacctggtgaaggctcggaagctg
ttgggctacttgaagaatgtgatccatattggaatagatgtgacggaggggaagctggtg
gagaaagacacatccatgtggcagctgcagggagaacccacagtgttgattacattggct
cacatcttcaattatttctcccctcttatgtgcaaggtgtacctggtggaagatgtgctc
atgaccttcctgttgagcatccttgagcgaggaggggcagtggaggcccacccccttatt
cagcagctgctggatctcatgtggcttcttatggaggagtatgaagtgcatgagtgcctc
aagcggctactgatatccctactgcgggcttacaggttctcccccatcatcccagacctg
ggattacaaatccactacctccggctcaccattgcagtcttgaagcatgagaaatctagg
aaatacctgctcagcaatgttctcttcgacgtactccgttctgttgtgttcttctacatc
aagagcccgctgcgtgtggaggaggcaggtttgcaggagctcattcccaccacgtggtgg
ccaaaccgcttcaccaaggagggcaaggagagtaaggaggtgaaggaggagagtgctgag
gagagattgaggcgtcgggcgtatgaaagaggctgccagcggctcaagaaacgcattgaa
gtggtggaaggtctccaggttcagattctgaagttgctgctgaacaacaaggacagagga
gggggggaagcctccagatacatctttctaaacaaactccgcaagtttcttcaggaaaat
gctagcaacagagcgaacttgactgtgttgtgcccaccagagtacatggtgtgcttcctg
cacaggctcatcgctgccctgcgctacttctgggatggccacaaagcaaagactccagct
gccctgagcagtgaagaggcctatgtccctccccaactcttctataatgggaaggtggat
tattttgaccttcagcgacttggaggtcttttgtctcatcttaagaagactctgaaagat
gacctggctgcaaaagccaacatcctgattgatcctgcagagctgcaggcagtgactatg
gatgatctggatgaagatgaggaatcagcaacatcagcagcacagtcccagcgtccttct
gccgccctggccattggtggagctcttgccaggcctgcctggctcagctcccccaccctg
ggccgggccaaccggttcctgagcacggctgccgtcagcctgatgaacccacggcggccc
cttggccccctggagaagatcaaagtgctcacgctgcgcgtggagcagcgcacgagggag
gacattgaaggcacccatggaaacgacggtctcttactgggcagacccccagaagagcca
gaccagcccatcactgagaactcccttctggaagtcctggatggaatagtgatgatgtac
aacctctgtgtccaccagcagcttgggaagatggttggtgtgtcagatgatgtgaatgaa
tatgccatggcactgaaagacacggaggaaaaaatcagccgctgcccaaagaggaggaga
gacattcatgaggagcttctgaagagccagaaggtcttctccgagaagctcaaccacctg
agccggcgcctcgcttggataaatgtcaccatttattcaaaggagaagatgcaggatatc
tactggctgctgcgagtgtgcatccgcaccattgagcacggcgacaggacgggctcgctt
ttcgctttcatgccggaattctacctcagcgtggctatgaacagctacagtgcactcaag
aactacttcagccctgtcaacagcatggaggaacttccaggctatgaagagacccttatg
cgcctcgctgccatcctggcaaagcattttgctgactcgaggattgtgggcacagacatc
cgggactccctgatgcaggccttggccagctacgtctgctacccccactcactgcgtgct
gtagagaggatcccagaagagcagcggatttccatgatgaagaacctcctggctccctat
gagcagcgaccctgggcacaaaccaactggatcctcgtcaggctgtggcggggctgtggc
tttgggtacagatacacacggctcccacacctgctgaaaaccaagcctgaggatgccagc
ctccccagcctgcagaagccatgtccctccaccttgctgcagcggcacatggcagatctg
ctccgcagtgaccgcgacctggcccccagcttcctcaacagtgtcctgaaccagctcaac
tgggccttctccgagttcattggcatgattcaggagatccagcaggcagcagagcgcctg
gagaggaactttgtggacagccgccagctgaaggtgtgtgccacatgctttgacctgtcc
gtgagcctgctcagggtgctggaaatgactgtcacactggcaccagagatcttcctcgac
tggactcgcccgtcgtcagagctgctgcttcggaggcttgcccagctcttgaaccaggtg
ctgaaccgtgtgacagctgaaaggaacttgtttgacagagtggtcaacctccgtctgcca
gggctggagagcgtggaccattacccaatccttgtggctgtgacagggatactggtccgg
ctgttggtggacactgatgttcaggggaccgagcgcgcgaccgcagtgctgctggcggat
ccctgcttccagctgcgctccatccagtacctgctgggccacgccgagccctcggccctg
gcagcagccgctccggccatggaaaagcgccacttctccctgcacacctacacagagtac
atcagtactgaggagctggcaaaagtggaaaagatgctgaaccatctgagtgaggagttc
aagcaggcagctgctaccacattgcccaccagcgaagaagacctgtgccccatctgctac
gcacaccccatctcggccatcttcaggccctgctcccacaagtcgtgcaaagcctgcatc
aaccagcacctgatgaacaacaaggactgcttcttctgtaaggccaccatcacaggggtg
gacgatttcaccaagccagccagctcttaa
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