Sylvia atricapilla (blackcap): 136367054
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Entry
136367054 CDS
T10263
Symbol
FBN1
Name
(RefSeq) fibrillin-1
KO
K06825
fibrillin 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04350
TGF-beta signaling pathway
sati04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
136367054 (FBN1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
136367054 (FBN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sati00536
]
136367054 (FBN1)
Glycosaminoglycan binding proteins [BR:
sati00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
136367054 (FBN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_CA
cEGF
hEGF
FXa_inhibition
EGF
TB
EGF_3
Plasmod_Pvs28
Fibrillin_U_N
EGF_FBN_1st
EGF_TEN
EGF_MSP1_1
EGF_Teneurin
Motif
Other DBs
NCBI-GeneID:
136367054
NCBI-ProteinID:
XP_066184512
LinkDB
All DBs
Position
13:10644749..10784419
Genome browser
AA seq
2864 aa
AA seq
DB search
MWRGRLLGIALGVAVLWASQAGAAAAGHTEGVSAKESRASRAKRRGHGGGHDALKGPNVC
GSRYNAYCCPGWKTLPGGNQCIVPICRHSCGDGFCSRPNMCTCPNGQIAPSCGSKSIQHC
NIRCMNGGSCSDDHCLCQKGYTGTHCGQPVCENGCLNGGRCVAPNRCACTYGFTGPQCER
DYRTGPCFTLVTNQMCQGQLSGIVCTKTLCCATVGRAWGHPCEMCPAQPHPCRRGFIPNI
RTGACQDVDECQAIPGICQGGNCINTVGSFECKCPAGHKFNEVTQKCDDIDECSTIPGIC
DGGECSNTVSSYFCKCPPGFYTAPDGLKCIDVRPGFCFSTLSNGRCGNQLPQPQSKMQCC
CDSGRCWAPAPAAAPEMCPIRSTDEYRKLCTTAAMLPARPDLPPARPDIIPPPVFPGVYP
PPHPEIIYPSRAPPIHPILPVNLTDYCQTFRHLCRNGRCIPTPGSYRCECNKGFQLHGRE
ECLDIDECERNPCIGGDCVNTQGSYICQCRIGYQSTATRTECRDIDECLQNGRICNNGRC
INTDGSFHCVCNAGFQVAVDGKNCEDMDECSIRNICLNGMCINEDGSFKCICKPGFQLAS
DGRYCTDINECETDGICMNGRCVNTDGSFRCECFPGLAVGLDGRVCVDTHMRSTCYGGYK
RGQCVRPLTGAVTKSECCCASTDYAFGEPCQPCPAQNSAEYQALCSSGTGMTAGGNDINE
CLLDPDLCPNGRCENLHGTYKCYCDPGYEVDSTGKNCIDIDECALNMLLCDNGQCRNTPG
SFTCTCPKGFVYTPDLKTCEDIDECESNPCVNGVCKNTPGSFVCECSPESTLDPTKTICI
ETVKGTCWQNIVNGRCEININGATLKSQCCSSLGAAWGSPCTPCERDPICQKGYSRIRGT
LCEDVNECEVFPGVCTNGQCVNTLGSFVCQCPNGMTLDASGRTCLDIRLESCYLQHEDEQ
CTSQIPGRHRMDACCCSVGAAWGYECEECPLRGTPEFEALCPRGPGFSTKIEISGKPFSK
DINECKMFPSLCTHGKCRNTIGSFKCRCDSGFALDSEERNCTDIDECRISPDLCGQGICV
NTPGDFECECFEGYESGFMMMKNCMDIDECQRNPLLCRGGTCINTEGSFRCDCPPGHQIS
PNISACVDINECELSTNLCRNGRCVNLIGKYQCACNPGYQSTPDKLYCIDIDECQIMNGG
CEDFCTNSEGSYECSCKQGFALMPDHRTCTDIDECEDNPNICDGGQCTNIPGEYRCLCYD
GFMASEDMKTCIDVNECDLHPNICLSGTCENTKGSFICHCDMGYSGKKGTTGCTDINECE
IGAHNCDRHAICTNTAGSFKCSCSPGWIGNGIKCTDLDECSNGTHMCSPHADCKNTMGSY
RCLCKEGYTGDGFTCTDLDECSENLNLCENGQCLNAPGGYRCECDMGFLPSVDGKACEDI
DECSLPNICVYGTCHNLPGLFRCECEVGYELDRSGGNCTDVNECADPTTCISGTCINTAG
SYTCECPPDFELNPTRVGCVDTRSGNCYLDIKTRGDNGGTFCSNEIGVGVSKASCCCSLG
KAWGVPCEHCPLVNTTEYKVLCPGGEGFRPNPITVILEDIDECQELPGLCQGGKCINTFG
SFQCQCPSGYYLNEETRVCDDVNECETPGICGPGTCYNTVGNYTCICPPDYMQVNGGNNC
MDMRRSLCYRNYYADNQTCDGELLFNMTKKMCCCSYNIGRAWNKPCEQCPIPSTDEFSTL
CGSQRPGFFIDIYTGLPVDIDECREIPGVCENGICINMVGSFRCECPVGFFYNDKLLICE
DIDECQNGPVCQQNAECVNTAGSYRCDCKPGYRFTSTGRCTDRNECQEIPNICSHGQCID
TVGSFYCICHNGFKTNDDRTMCIDINECERDACGNGTCRNTIGSFNCRCNLGFILSHNND
CIDVDECASGNGMLCRNGQCVNTIGSFQCLCNDGYEVALDGRTCVDINECALEPGKCSPG
TCQNLDGSFRCICPPGYILQNDKCEDIDECVEQPEICALGTCSNTPGSFKCLCPEGFVLS
STGRRCQDLRVSYCFTKFEDGKCSVPKSRNHSKQECCCALKGQGWGDPCELCPEEADEAF
RQICPFGIGILVGPGDARLDVDECLDPDNCKFGQCINTDGSFRCECPYGYILQGAECVDT
DECAVGNPCGNGTCRNVIGGFECTCVEGFEPGPMMTCEDVNECIQNPLLCAFRCVNTFGS
YECKCPGGYVLREDRRMCRDQNECEEGIHDCDSKQMECKNLIGTYMCICGPGYQRRPDGE
GCIDENECQTKPGLCENGRCVNTVGSFRCECNEGFTVSDTQDECLDNREGYCFTEVLQSM
CQIGSSNRNAVTKSECCCDGGRGWGQNCEVCPFPGTVAFKKLCPHGRGYTSSGADIDECK
VIHDVCRNGECINERGTYHCICNLGYTPDVTGTLCIDLNECNESPKPCNFICKNTEGSYQ
CSCPKGYILQEDGRSCKDLDECATKQHNCQFLCVNTIGGFTCKCPPGFTQHHTACIDNNE
CATEINICGAKGICQNTPGSFVCECQRGFSLDQTGQSCEDVDECDGNHRCQHGCQNIIGG
YRCSCPQGYLQHYQWNQCVDENECLSAHICGGASCHNTLGSYKCMCPTGFQYEQFSGGCQ
DINECGSAQAPCSYGCSNTEGGYVCGCPPGYFRIGQGHCVSGVGLGRGQGQELSLSGEVD
DNSLSPEACYECKINGYPKRGRKRRSTNETASEAEDQQELEPPISLASWDIEKAAVFSIN
ISDLSNKDRILELLPALTTLTNHNRYLIDSGNEDGFFRINKKDGISYLHFTKKKPVPGNY
SLQISSIPLYKKKELNQLEAKHDKDYLSGELGDNLKMKIQILLH
NT seq
8595 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgggggcggctgctggggatcgccctgggagttgccgtgctgtgggcgtcccag
gctggtgccgccgccgccgggcacaccgagggggtgagcgccaaggagagccgggccagc
cgggccaagaggcgagggcacggcggcgggcacgacgcgctcaaaggaccaaatgtgtgt
ggatcccgttataatgcctactgctgccctggatggaaaacgttacctggtggaaaccaa
tgcatagtcccaatctgcagacattcctgtggggatggattttgctctagaccaaacatg
tgcacatgcccaaatggtcagatagccccctcctgtggttcaaaatcaatccaacactgt
aacatccggtgcatgaatggaggtagctgcagtgatgaccattgcctctgtcagaaggga
tatacaggaacacactgtggacagcctgtctgtgaaaatggatgtctaaatggagggaga
tgcgtggctccgaatcgatgcgcttgcacctatggctttactggaccccagtgtgagaga
gattacaggaccggcccttgcttcactttggtaaccaaccagatgtgccagggccagctc
agtggaattgtgtgcacaaaaaccctgtgctgtgcaactgttgggagggcgtggggccat
ccctgtgaaatgtgtcctgcccagccgcatccctgccgccgaggcttcatcccgaacatt
cgaacgggggcctgtcaagatgtggatgaatgccaagccatccctgggatctgtcaaggg
ggaaattgcattaatactgttggatcttttgagtgcaaatgcccagctggacacaagttt
aatgaagtaacacaaaaatgtgatgatattgatgaatgtagcaccattcctggaatttgt
gatggaggagagtgttcaaacacagttagcagttacttctgcaagtgtcctccagggttt
tatacagctcctgatggcttaaaatgcatagacgtgcgccctggattctgcttctccacg
ctgagcaacgggcgctgtggcaaccagctgccgcagccgcagtccaagatgcagtgctgc
tgtgacagcggccgctgctgggctccggctcccgccgccgccccggaaatgtgccccatc
agatccaccgatgagtatcgtaaactgtgcacaacagctgctatgctgccagcaagacct
gaccttcctccagcccgtcctgacatcatccctccacccgtctttcctggagtttaccct
cctccacatccagaaatcatctatccatctcgggctccaccgattcatccgatcttgccg
gtgaacttaaccgactattgccaaacattccgacatctctgccgtaatggacgctgtatt
cccactcctgggagctaccgctgcgagtgcaacaaaggattccaactgcatggtagagag
gaatgccttgatattgatgaatgtgaaaggaatccgtgcattggtggagactgtgtgaac
acccaagggtcctacatctgccagtgtcgtattgggtatcagagcacggcgaccagaacc
gagtgccgagacattgatgaatgcttacagaatggtcgtatctgtaataatggacgatgc
ataaatactgatggcagttttcactgtgtgtgtaatgctggctttcaagtggcagttgac
gggaaaaactgtgaagatatggatgaatgcagcatcaggaatatttgcctcaatgggatg
tgcatcaatgaagatggcagttttaaatgcatttgtaaaccggggttccaattagcatct
gatggacgctattgcacagacatcaatgagtgtgagacagatggaatatgcatgaacggg
cgctgtgtgaacactgatggctctttcagatgtgaatgcttccctggccttgcagtagga
ctggatggacgtgtctgtgttgatacacacatgcgaagtacgtgctatggtggctacaag
agaggacaatgtgtgagaccattaacaggtgcagttacaaagtcagagtgctgctgtgcc
agcactgactatgcctttggagagccttgccagccctgcccagcacaaaactcagctgaa
tatcaggctctgtgtagcagtggaactggcatgactgcaggaggaaatgatattaatgag
tgcttattggatcctgatctctgtccaaacggaaggtgtgagaatctgcatggaacatac
aaatgttattgtgaccctggatatgaagtggactcaactgggaaaaactgcattgatatt
gatgaatgtgcactgaatatgctgctttgtgacaatgggcaatgcagaaatactcctgga
agtttcacctgcacttgtccaaagggatttgtatacactcctgatctaaaaacatgtgaa
gatattgatgaatgtgaatctaacccctgtgttaatggagtgtgcaaaaacacaccaggt
tcttttgtctgtgaatgttctcctgaaagcactttggatccaaccaaaaccatctgcata
gaaactgtcaagggtacctgttggcagaacatagtcaatggaaggtgtgaaataaatatc
aatggagcaactctgaagtcccagtgctgttcttcactaggtgctgcttggggaagccca
tgtacaccatgtgaacgagacccaatatgtcaaaagggatattcaagaataagaggaaca
ttgtgtgaagatgttaatgagtgtgaggtgtttcctggagtctgtacaaatgggcagtgt
gtcaataccttgggatcatttgtttgccagtgccccaatggaatgactttagatgcttct
ggacggacttgtcttgacattcgcttggagagctgctacctgcagcatgaggacgagcag
tgcacatcccagatcccggggaggcaccgcatggacgcctgctgctgctccgtgggggca
gcctggggctacgagtgcgaggagtgtcctctccggggaactcctgagtttgaagctctt
tgcccgaggggacctgggttctctacaaagatagagataagtgggaagcctttctctaaa
gacatcaatgaatgcaaaatgttccccagcctttgtacccatggaaaatgcagaaatacc
attggcagttttaagtgtagatgtgacagtggatttgccctcgattctgaagagaggaac
tgcacagatatcgacgagtgccgcatctctcctgatctttgtggccaaggcatctgtgtc
aatactcctggagactttgagtgtgaatgttttgaaggctatgaaagtggatttatgatg
atgaaaaactgcatggacattgacgagtgtcagcgcaatccccttctctgccgaggtggc
acctgcatcaacacagagggaagttttcggtgtgattgccctccaggccatcagatatca
ccaaatatctctgcatgtgtagacattaatgaatgtgagctgagcaccaatctgtgccga
aatggccgatgtgtcaacctgattggaaagtatcagtgtgcttgcaaccctgggtatcag
tccacaccagacaagctatactgtatcgatattgatgagtgccaaataatgaatggtggc
tgtgaggacttctgtacaaactcggagggcagctatgaatgtagctgtaaacaaggcttt
gcactcatgccagaccacaggacatgcactgatattgatgagtgtgaagacaaccctaac
atctgtgatggaggccagtgtacaaacatcccaggagaatacaggtgtctctgctatgat
ggattcatggcatctgaagacatgaagacttgcatagatgttaatgagtgtgatctgcat
ccaaacatctgtctgagtggaacctgtgagaatacaaaaggctcatttatctgtcactgt
gatatgggatattcaggcaagaaaggcaccactggctgcacagatatcaatgagtgtgaa
attggagcccataactgcgacagacatgccatatgtacaaacacagcaggaagcttcaaa
tgtagctgcagccccggctggattggaaatggtatcaaatgcacagatctggatgagtgc
tccaatggaacccacatgtgcagcccacatgctgactgcaagaatacgatgggctcttac
cgctgcctgtgtaaagagggttacactggggatggtttcacttgtacagaccttgatgaa
tgctcagaaaacttgaatctctgtgaaaatgggcagtgcctcaatgcccctggagggtat
cgctgtgaatgtgatatgggattcttgccaagtgtagatgggaaagcatgtgaagatatt
gatgagtgctcactgcctaacatctgtgtctatggtacttgtcacaacctccctggactc
ttccgatgcgagtgtgaagtgggctatgagctggacagaagtggtggtaactgcacagat
gttaatgaatgtgcagatcccacaacctgcatcagtggcacgtgtatcaacactgctggc
agttacacctgtgagtgccctcctgattttgagctgaatcccacacgagttggatgtgtt
gatacacgatctggcaactgttacctggacatcaaaactcggggagataacggtggcacc
ttctgcagcaatgagattggagtgggtgtttccaaggcctcctgttgctgctccctgggc
aaagcctggggagttccctgtgagcactgcccacttgtgaacacaactgaatataaggtt
ctttgccctggaggggaaggattccgaccaaaccctattacagttatattagaagatatt
gatgagtgtcaagaactgcctggactttgccaaggaggaaaatgtattaatacatttggt
agcttccagtgtcaatgtccatcaggatactacttgaatgaagagactcgagtgtgtgat
gatgtgaatgaatgtgagacacctggcatttgtgggcctggcacatgttacaatactgtt
gggaactacacctgcatctgccctcctgattacatgcaagtcaatggaggaaacaactgc
atggatatgagaagaagtctatgttatagaaattactatgctgacaatcaaacctgtgat
ggtgagctgctcttcaatatgaccaagaaaatgtgctgctgttcctacaacattggacgt
gcatggaataagccttgtgaacagtgtcctattccgagcacagatgaattctccacactc
tgtggaagtcaaaggcctggcttcttcattgacatttatacaggattaccagttgatatt
gatgaatgcagagagattcctggagtgtgtgaaaatgggatctgtataaacatggttggc
agcttccgatgcgagtgtcctgtgggtttcttctacaatgacaaactcctgatctgcgaa
gatattgatgagtgccagaacgggccggtttgccagcagaacgcggagtgtgtgaacacc
gccggcagctaccgctgtgactgcaaacccggctacaggttcacgtccacggggcgctgc
actgatcggaatgaatgtcaagaaattcccaatatctgcagccatgggcaatgtattgac
actgttggaagtttctactgcatttgtcacaatggattcaaaaccaatgatgacaggaca
atgtgtatagacattaatgagtgtgagagagatgcctgtggcaatggaacctgcaggaac
accattggctccttcaactgccgctgcaacctgggcttcatcctctcccacaacaacgac
tgcatagacgtggatgagtgtgcaagtggaaatggaatgctctgcagaaatggtcagtgt
gtgaacaccattgggtccttccagtgtctctgcaatgatggctacgaggtggctctggat
ggaaggacttgtgttgatataaatgagtgtgcactggagcctggaaaatgctcaccaggc
acatgtcagaacttggatggctcattcagatgtatctgtcctcctggatacatcctgcag
aatgacaaatgtgaagacattgatgagtgtgtggaacagccagaaatttgtgccctgggc
acatgtagcaacactccaggcagtttcaaatgtctgtgtccagaaggctttgtattgtct
tccacaggaaggcgatgccaagatctgagagtcagctactgctttaccaagtttgaagat
gggaagtgttctgtgccgaagtcccggaaccactccaaacaagaatgctgctgtgcctta
aaggggcagggatggggagatccctgtgagctctgcccagaggaagcagatgaggcattc
agacagatttgtccatttggaattggcatccttgttggacctggtgatgcaaggctggat
gtggatgagtgccttgatcctgataactgtaaatttgggcagtgtatcaacacagatggg
tctttccgctgtgagtgtccgtatggttacatcctacaaggagcagaatgtgtggatact
gatgaatgtgctgttggaaacccctgtggaaatggaacttgcaggaatgtgataggaggc
tttgaatgcacgtgtgtagaaggatttgagcctgggccaatgatgacctgtgaagatgtc
aatgagtgcattcagaaccctctgctctgcgccttccgctgcgtcaacacttttggatcc
tacgagtgcaagtgccccggggggtacgtgctgcgggaggaccggagaatgtgcagagat
cagaatgagtgtgaagaaggaattcacgactgtgactcaaagcagatggaatgcaaaaac
ctaattggcacctacatgtgtatctgtgggcctggctatcagcgcagaccagacggggaa
ggctgtatagatgagaatgaatgtcagaccaaacctgggctctgtgagaacggccgttgt
gtgaacactgtggggagtttcaggtgtgagtgcaacgagggattcacggtcagcgacacc
caggacgagtgccttgacaacagggagggctactgcttcactgaagtcttacaaagtatg
tgccaaatcggatcgagcaacaggaacgctgtcaccaagtctgaatgctgctgtgacggt
ggccgaggctgggggcagaactgtgaggtctgtcccttccctggcactgtggccttcaag
aagctttgccctcatggccgaggatacacatccagtggagcagatattgatgagtgcaag
gttattcacgacgtctgccgcaatggggagtgcatcaacgagaggggaacttatcactgt
atttgcaatctgggctatactccagatgtcactggcactctttgcattgatctgaatgaa
tgcaatgagtctccaaaaccttgcaatttcatctgcaaaaacacagaagggagctaccag
tgttcgtgtccaaaaggatatatcctgcaagaagatgggaggagctgcaaagatcttgat
gaatgtgcaacaaagcagcacaactgccagttcctttgtgtcaacactattgggggattc
acttgcaaatgtcctcctggattcactcagcaccatacggcctgcattgacaacaacgag
tgtgctactgagatcaatatttgtggggcaaagggaatttgccagaatacaccaggaagt
tttgtttgtgagtgtcaacgtggcttctcacttgatcaaactgggcagagctgtgaagat
gttgatgaatgtgatggcaaccaccggtgtcagcatggctgccaaaatataattggagga
tacaggtgcagctgcccacaaggatatctccagcattaccagtggaaccaatgtgttgat
gaaaacgaatgtctcagtgcacacatttgtggaggagcatcctgccacaatactttggga
agctataaatgtatgtgccctactggatttcagtatgagcagtttagtggaggttgccaa
gatatcaatgaatgcggttctgcacaagccccatgcagttatggttgttcaaacactgaa
ggtggctacgtctgtggatgtccacctggttacttcagaataggacaaggacactgtgtt
tctggagtggggctaggcagaggtcaaggacaagagctttcactcagtggagaagtagat
gacaactccctctctccagaagcttgttatgaatgtaaaatcaatggctatcccaagaga
ggaaggaagcgcaggagcactaatgaaactgcaagtgaagcagaggatcagcaagagctg
gagccgccaatcagtctcgccagctgggatattgagaaagcagcagtcttctccatcaac
atctcggatctcagcaacaaagatcgaatcctggaactgctccctgccctcacaacactg
acaaaccataaccgatatttaattgactccggaaatgaagatggtttctttagaatcaat
aagaaggacgggataagttaccttcatttcacaaagaagaagccagtgcctggaaattat
tcattacaaatcagtagtattccactctataaaaagaaagaacttaaccagcttgaagcg
aaacatgacaaagactacctcagtggtgagctgggagataacctgaaaatgaaaattcag
atattgcttcattaa
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integrated database retrieval system