Sylvia atricapilla (blackcap): 136367489
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Entry
136367489 CDS
T10263
Symbol
PDGFRB
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04010
MAPK signaling pathway
sati04020
Calcium signaling pathway
sati04510
Focal adhesion
sati04518
Integrin signaling
sati04540
Gap junction
sati04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
136367489 (PDGFRB)
04020 Calcium signaling pathway
136367489 (PDGFRB)
09133 Signaling molecules and interaction
04518 Integrin signaling
136367489 (PDGFRB)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
136367489 (PDGFRB)
04540 Gap junction
136367489 (PDGFRB)
09142 Cell motility
04810 Regulation of actin cytoskeleton
136367489 (PDGFRB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sati01001
]
136367489 (PDGFRB)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
sati04090
]
136367489 (PDGFRB)
Enzymes [BR:
sati01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
136367489 (PDGFRB)
Protein kinases [BR:
sati01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
136367489 (PDGFRB)
CD molecules [BR:
sati04090
]
Proteins
136367489 (PDGFRB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Ig_PDGFR_d4
Pkinase
Ig_3
I-set
ig
Ig_2
V-set
VEGFR-1-like_Ig-like
C2-set_2
VEGFR1-3_N_Ig-like
C2-set
BACON_2
Motif
Other DBs
NCBI-GeneID:
136367489
NCBI-ProteinID:
XP_066185253
LinkDB
All DBs
Position
14:complement(12003741..12035022)
Genome browser
AA seq
1093 aa
AA seq
DB search
MLCPTLKTCLWLLILTGLLEVTSGDSRLHIEPRDTELVLSLHSTFSLLCYGDRELVWERE
GQPLTASLEHRDSVFVSNLTLRNVTGRHTGEYTCTYSPEQAPEPAERRALYIYVPDPSLV
FLPAVTSEEFFIFITGYTEAVIPCRVTNPQMQVTLYEKKVENPIPATYDPQQGFKGFFED
KTYFCRTYVDDQEVDSDTFYVYRIQVSSVNVSISAVQTMVRQGENITVMCTVSGNELVNF
NWDYPRKQAGKVVEPVTDFLPGSTHEIRSILIIQNAELEDSGTYVCNVSEGYHEKTDRKN
ITVQVIERGFVHFHTHLPSTVYAEVHKSHTIQVEVEAYPQPSIVWLKNNKTLTMESSSEF
TITSRNLSETRYQTALVLVRVKQEEGGFYTIRASNEDDEQELSFHLQINVPAKVVDLKEN
SSANSGEQTVTCSAEGMPQPEISWSTCSDIKWCSSKGQPTRVLGNESAEIGVQTNASYHA
ERRLYRVNSTLQLHRVHEPLLLRCTVQNFLGTNSQDITLVPHALPFKVVIISVILALLVL
TVISLIILIVLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWEVPRDKLVLGR
TLGSGAFGRVVEATAHGLSHSRSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNI
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQSYGDKARREAELYGNTPKEDHV
HSHLSMSVESDGGYMDMSKDDSLDYVPMSDMKGEVKYADIESSNYGTPYELDSYSPSAPE
RTDRVTLINESPLLSYMDLVGFSFQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMSKPTHASDEIYNIMQKCWEEKFEIRPSFSQLVVLMGNLLVD
CYRKRYQQVDEEFMKSDHPAVVRTRPVIPVLNNARLAASSPSSGTLYTAVHQNGGENDYI
IPLPDPKPEGSCDLPQEASISRASSMLNEANTSSTISCDSPLGLRQDEEQESDPQPGCQE
PTTGHQEVEESFL
NT seq
3282 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgccccactctcaagacgtgtctctggctcctcatcctcaccggtctgctggag
gtcacatctggggacagcaggctgcacattgaacccagagacactgagcttgtcctcagc
ctccacagcaccttctccctcctgtgctatggggacagagagctggtctgggaacgggag
gggcaacctctcactgcctcactggagcacagggacagtgtctttgtcagcaacctcacg
ctcaggaacgtcacaggccgtcacaccggggagtacacgtgcacctacagccctgagcag
gctccagagccagcagagaggagagccctgtacatctacgttccagatccctccctggtt
ttcctcccagcagtcacctctgaagagttcttcatcttcatcacgggctacacagaggct
gtcatcccatgccgtgtgaccaacccacagatgcaggtcaccctctatgagaagaaggtg
gagaaccccatcccagctacatatgatccacaacagggatttaaaggcttctttgaggat
aagacctatttctgccggacatatgtggatgaccaggaggtggattcagacactttctat
gtctacaggatccaggtgtcatctgtgaacgtctccatcagcgcagtgcagaccatggtg
cgccagggagaaaacatcactgtgatgtgcaccgtgagtggcaacgagctggtcaacttc
aactgggattatccccgcaagcaggcagggaaggttgtggagccagtgactgacttcctg
cctggatccacccatgagatccgctccatccttatcatccagaatgcagagctggaggac
agtgggacctatgtctgcaatgtctccgagggctaccatgagaaaacagatcggaagaac
atcactgtccaagtgatcgagcgtggctttgtgcacttccacacccacctgcccagcaca
gtgtatgccgaggtccacaagagtcacaccatccaggtggaagtggaggcttatccccag
cccagcattgtgtggctgaagaacaacaagacattgaccatggagagcagcagtgagttc
accatcaccagcaggaacctgtcagaaaccaggtaccagacagctctggtgctggtgcga
gtgaagcaggaagaaggaggattttacaccattcgagcttccaatgaggatgatgagcag
gagctctccttccatctgcagataaatgtgccagctaaagtggtggatctcaaggagaac
agcagtgccaacagtggggagcagactgtaacatgctctgctgaaggcatgccccagcca
gagatcagctggtctacttgcagcgacatcaaatggtgcagcagtaagggacagcccacc
cgggtgctggggaacgagtcggccgagatcggcgtgcagaccaacgcctcgtaccacgcg
gagcggcggctctaccgtgtcaacagcaccctgcagctgcacagggtgcacgagcccctg
ctcctcaggtgcaccgtgcagaacttcctgggcaccaactcccaggacatcactctggtc
ccacacgccttgccattcaaggtggtcatcatttctgtcatcctggccttgctggtcctc
actgtgatctccctgatcatcctaatcgtgctgtggcagaagaaacctcgttatgaaatc
cgctggaaagtgattgaatcagtaagctctgatgggcacgagtacatctatgtggatccc
atgcagctcccttatgactccacctgggaggtgcccagggacaagctggtgttaggacgc
actcttggctctggtgcctttggtcgtgtggtggaggcaacagcccatggcctgagccat
tcacggtccaccatgaaagtggcagtcaaaatgctcaagtccacagcccgcagcagtgag
aagcaagccctcatgtctgagctgaagatcatgagccacctgggacctcacctcaacatc
gtcaacttgctgggggcctgcaccaaaggaggacccatctacatcatcaccgagtactgc
cgctacggggacctggtggattacctgcaccgcaacaagcacaccttcctgcagtcctac
ggggacaaggcacggcgggaggcggagctctacgggaacacccccaaggaggaccatgtg
cacagccacctctccatgtctgtcgagagtgacgggggctacatggacatgagcaaggat
gactccctggactatgtgcccatgtccgacatgaagggtgaagtcaagtatgctgacatt
gagtcttctaactacggcaccccctatgagctggacagctactccccctcagctcctgaa
aggacagaccgggtgacactgataaatgagtctccactcctcagctacatggacttggtg
ggcttcagcttccaggtggccaatgggatggagttcctggcttccaaaaattgtgtgcac
cgtgacctggctgccaggaatgtcctcatctgtgaggggaagctggtgaagatctgtgac
tttggcctggcgagggacatcatgagggattccaactatatctccaaaggcagtaccttc
ttgccccttaagtggatggcaccagagagcatcttcaacaacctctacaccaccctgagt
gatgtgtggtcttttgggattcttctttgggagatattcactctaggagggactccatac
cctgagctgcctatgaatgaacagttctacaacgccatcaaacgtggctatcggatgtcc
aaacccacccatgcctctgatgaaatctacaacatcatgcagaagtgctgggaggagaag
tttgagatcagaccatccttctcacagctggtggtgcttatgggaaacctcctggtggat
tgctacagaaagaggtaccagcaggtggatgaggagttcatgaagagtgaccaccccgct
gttgtccgcaccagacccgtcatccctgtgctgaacaacgcccgccttgctgccagctcc
cccagcagcggcaccctctacacagccgtgcaccagaacgggggcgagaatgattatatc
atccctctgcctgaccccaaacctgaggggagctgtgatctccctcaggaggcctccatc
agccgggccagctccatgctgaacgaggccaacacatcatctacaatatcctgtgacagc
cctctgggcctccggcaggatgaggagcaggaatctgacccacaaccaggctgccaggag
ccaaccacaggacaccaggaggtggaggagagtttcctgtag
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