Sylvia atricapilla (blackcap): 136367908
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Entry
136367908 CDS
T10263
Symbol
LFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase lunatic fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati00514
Other types of O-glycan biosynthesis
sati04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
136367908 (LFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
136367908 (LFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sati01003
]
136367908 (LFNG)
Enzymes [BR:
sati01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
136367908 (LFNG)
Glycosyltransferases [BR:
sati01003
]
Glycan extension
O-Glycan
136367908 (LFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
136367908
NCBI-ProteinID:
XP_066185847
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All DBs
Position
15:3816925..3828036
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AA seq
367 aa
AA seq
DB search
MLKSCGRKLLLSLVGSMFTCLLVLMVEPPGRPGLARGEAGGAQRALQSLGAAAAVAPPAA
QGPPGLRSFADYFGRLSRARRELPPAPPSPPRPPAEDISPRDVFIAVKTTKKFHKARLEL
LLDTWISRNRDMTFIFTDGEDEELKKQARNVINTNCSAAHSRQALSCKMAVEYDKFIESG
RKWFCHVDDDNYVNVRMLVKLLSSYPHTQDIYIGKPSLDRPIQATERISENKMHPVHFWF
ATGGAGFCISRGLALKMSPWASGGHFMSTAEKIRLPDDCTIGYIIESVLGVKLIRSNLFH
SHLENLHQVPKSEIHKQVTLSYGMFENKRNSIHMKGAFSVEEDPSRFRSVHCLLYPDTPW
CPTNMVY
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagctgcgggaggaagctgctcctgtccctcgtgggctccatgttcacctgc
ctcctggtgctcatggtggagccgccggggaggccggggctggcccggggggaggccggc
ggggcgcagcgggcgctgcagagcctgggggcggcggcggccgtggctcccccggcggcg
caggggccgcccgggctccgcagcttcgccgattacttcgggcggctgagccgagcgcgg
cgggagctgcccccggccccgccgagccccccgcggccgccggcagaggacatctccccc
cgcgacgtcttcatcgccgtcaagaccaccaagaagtttcacaaggcgcggctagagctg
ctgctcgacacctggatctcccgcaaccgcgacatgaccttcatcttcactgacggggag
gatgaggagctgaagaagcaagcacgaaatgtcatcaacaccaactgctcggctgcccac
agccgccaggcgctgtcctgcaagatggccgtggagtatgacaagttcatcgagtctggc
agaaagtggttctgccacgtggacgatgacaactacgtgaacgtgcggatgctggtgaag
ctgctctccagctacccccacacacaggacatctacatcgggaagcccagcctggaccga
cccatccaggctacggagaggatcagtgagaacaagatgcatcctgtgcatttctggttt
gccacgggtggagcagggttctgtatcagccgagggctggcactgaagatgagcccttgg
gccagcgggggccacttcatgagcactgcagagaagatccgcctgcccgacgactgcacc
atcggctacatcatcgagtccgtgctgggcgtgaagctcatccggagcaacctcttccac
tcccacctggagaacctccaccaggtgcccaagtcggagatccacaaacaggtgacgctg
agctacggcatgttcgaaaacaagcgcaactccatccacatgaagggagccttctctgtc
gaggaggacccatccaggttccgctccgtgcactgcctgctgtacccagacacgccgtgg
tgccccaccaacatggtttactag
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