Sylvia atricapilla (blackcap): 136367970
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Entry
136367970 CDS
T10263
Symbol
SMCR8
Name
(RefSeq) guanine nucleotide exchange protein SMCR8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
136367970 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136367970 (SMCR8)
Membrane trafficking [BR:
sati04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
136367970 (SMCR8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMCR8_C
Folliculin
Motif
Other DBs
NCBI-GeneID:
136367970
NCBI-ProteinID:
XP_066185952
LinkDB
All DBs
Position
15:5991464..5998061
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AA seq
932 aa
AA seq
DB search
MISAPDVVAFTREEELEDDLYREPPLPEEYSVPLFPFAGQGANPWAKVAGSKFTRDFILI
SEFSEQVGPQPLLTIPDDAKVSGTFDLNYFSLRIMSVDYQASFVGHPPGSAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISADEHKIMQQFQELSTEFSKAS
ECLKTGNRKAFANELEKKLKDLDYTRTVLHNETEQQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLRQIRSYPYRKLKDSEFHPYEPECALDRADVGSDQDPAASDHTEPGETPLY
THMPSYTPKLIKAKSAKCFDKKLKTLEELCDVYFFTQTLDQLHHIERTFRGDVCYLLTEQ
ISRALLKQQSVTNFLFEDVSFLDEKPPEKQYRGCQGLGQDAIDEKCSEESLAPKVVISLG
SYKSSVECVPIKMEQEMEDSEEPKMSESVMSEPQENLDYLDADIKGSISSGESIEVLGTE
KSGSGLTKSESQASLPVMPSPQAGRSKVGSRRTVSEDSIEVLSTCPSESLIPEDFKASYP
SAINEEPYVDDDEGGLRFTPRANPGVDDGQDDISKQESLVQVDAACCIGKESPNFLEPLP
ELGQKPCEEDGVVRIPPQPYRPAEQGLRGGFPSHDGLSGGLLPYELDSRYLSGSREVSKS
SLDECSDSTSYMSSAASTCSDRTPSPAHLGSAAGERHRKRAGQNALRFIRQYPFAHPAIY
SLLSGRTLVVLGEDEAMVKKLVTALSIFVPNCSAYAKPVKHWVTSALHLVDFQKWKLIGL
QRAVSPAGVNVLHALSRYSRYLSILDADSKTLRCPLYKGTVVTRLADHRTQIKRGSTYYM
HVQSVLTQLCSKAFLFTFCHHLHLPISERESEESVVSRRMNFLKLQLGLVNEDVKIVQYL
AELLKLHYIQEPGQGGNPLLRFDYVPSFLYKI
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccctgatgtggtggccttcaccagggaggaggagctggaggatgatctg
taccgcgagccgcccctgcccgaggagtactcggtgccgctgttccccttcgccgggcag
ggcgccaacccctgggccaaggtcgccggctccaaattcacccgggacttcatcctcatt
tctgagttctcggagcaagtggggccccagcccctcctgaccatccccgatgacgccaaa
gtgtcgggcaccttcgatctcaattatttttccctgcggatcatgtctgtggattaccag
gcatcctttgtgggacaccctcccggctctgcctacccgaaactgaactttgtggaggat
tccaaggtggtgctgggggactccaaggaaggggcctttgcctacgtgcaccacttgacc
ctgtatgacctggaagccaggggctttgtgaggcccttctgcatggcctatatttctgct
gacgagcacaaaatcatgcagcagtttcaggaactctccaccgagttctctaaagcctct
gaatgcctgaagacggggaaccggaaagcttttgccaatgaactggaaaagaaactgaaa
gaccttgactacaccaggaccgtcctgcacaacgagactgagcaacagaagaaagccaac
gacaaggggtattacactacccaggccattgagaaggccaacgagctggccagtgtggaa
aagtcaatcattgagcaccaagacctgctgaggcaaatccggtcatatccctacaggaag
ctgaaggactctgaattccacccctacgagccagagtgtgccctggaccgggctgacgtg
ggcagtgatcaggaccctgctgcctctgaccacactgagcccggtgaaactcccctgtac
acccacatgccctcctacacccccaaactcatcaaagccaagtctgccaagtgctttgac
aagaagctgaagacactggaggaactctgtgatgtttattttttcacccagacccttgac
cagttgcaccatatcgagaggacttttcgaggtgatgtgtgttacctcctgacagagcag
atcagccgagctctcctaaagcagcagagcgtcaccaacttcctctttgaggatgtgtct
ttcctggatgaaaaacctcctgaaaaacagtacagaggctgccaggggctgggccaagat
gccatagatgaaaagtgctcagaagagtcccttgctcctaaagtggtcatcagcctgggc
tcctacaagtccagtgtggagtgcgtgcccatcaagatggagcaggaaatggaggactct
gaagagcccaaaatgtcggaatctgtaatgtctgagccccaggagaacctggactacctg
gatgcagatatcaaaggcagcatcagcagcggggagagcatcgaggtcctgggcacagag
aagtcggggtctgggctgaccaaatcggagagccaggccagcctgcccgtcatgcccagc
ccccaggcgggccgcagcaaggtgggcagccggcgcacggtcagcgaggacagcatcgag
gtgctcagcacgtgtccctccgagtccctcatcccagaggatttcaaagcgagctaccca
agtgccattaacgaggagccctacgtggatgatgatgaaggaggccttcgcttcaccccc
agagcgaacccgggcgtcgatgacgggcaggacgacatctcaaagcaggaaagcttagtg
caggtggatgctgcctgttgtatcgggaaggagagtcccaacttcctggagcccctgccg
gagctgggccagaagccgtgcgaggaggacggggtggtgcggatcccgccgcagccgtac
cggccggcagagcaggggctgcgcgggggcttcccctcccacgacggcctctcgggaggg
ctgctgccctacgagctcgactcccgctacctgtcgggcagcagggaggtgagtaagagc
agcctggacgagtgctcggactccacgagctacatgagcagcgcggcctccacgtgctcc
gacaggaccccgtctcccgcccacctgggcagcgcggccggggagaggcacaggaagaga
gcggggcagaacgcactgcgtttcatccgccagtaccccttcgcccaccctgccatctac
tccctgctcagcgggaggaccctggtggtgctgggggaggacgaggccatggtcaagaag
ctggtgacggcgctctccatcttcgtgcccaactgcagcgcgtacgccaagcccgtgaag
cactgggtcacctctgcgctgcacctggtggatttccagaagtggaagttgattggactg
cagagggccgtgtcccctgccggggtgaacgtgctgcacgccctgagccggtacagccgc
tacctgagcatcctggacgccgacagcaagaccctgcgctgtcccctctacaagggcacc
gtggtgacccgcctggccgaccaccgcacgcagatcaagcgtggcagcacctactacatg
cacgtccaaagcgtcctcacccagctgtgttctaaagccttcctcttcaccttctgccat
cacttgcaccttcccatcagcgaaagggaatcggaggagtctgtcgtgagccgcaggatg
aacttcctaaagcttcaactgggcctcgtcaatgaagacgtcaaaatcgtgcagtacttg
gctgagctgctgaagctgcactacattcaggaaccggggcagggggggaaccccctgctc
agatttgactatgttcccagctttttgtacaaaatctag
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