Sylvia atricapilla (blackcap): 136369414
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Entry
136369414 CDS
T10263
Symbol
RFNG
Name
(RefSeq) beta-1,3-N-acetylglucosaminyltransferase radical fringe
KO
K05948
fringe [EC:
2.4.1.222
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati00514
Other types of O-glycan biosynthesis
sati04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
136369414 (RFNG)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
136369414 (RFNG)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sati01003
]
136369414 (RFNG)
Enzymes [BR:
sati01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.222 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
136369414 (RFNG)
Glycosyltransferases [BR:
sati01003
]
Glycan extension
O-Glycan
136369414 (RFNG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fringe
Galactosyl_T
Motif
Other DBs
NCBI-GeneID:
136369414
NCBI-ProteinID:
XP_066188337
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All DBs
Position
18:7837163..7845220
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AA seq
360 aa
AA seq
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MNGPCLGLRRAGVLLSLGAAALLLLLLPRGQRPAVPRPPPAAGPSAAPPHRAGPEGSAGA
PGGGGLAGSPQLARRGRLGAAGSSARESLELKDIFIAVKTTRKYHKSRLDLLLQTWISQA
RGQTFIFTDWEDRELRLKAGDHMINTNCSAVHTRQALCCKMSVEYDKFLESGQKWFCHVD
DDNYVNPRTLLHLLSAFSHSQDVYVGRPSLDHPIEAADHVQSDGSKTTVKFWFATGGAGF
CISRGLALKMSPWASLGNFISTAERVRLPDDCTIGYIIEGLLEVKLLHSPLFHSHLENLQ
RLQGESVLQQVTLSYGDPENKHNVVSVGGVFGLQQDPTRFKSVHCLLYPDTIWCPAKKMS
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtccttgcctggggctgcgcagggccggggtcctcctgtccctgggcgccgcc
gccctcctgctgttgctgctgccgcgggggcagcgccccgccgtgccccgcccgccgccc
gccgccgggcccagcgcggccccgccgcaccgcgcgggccccgagggctctgccggagcg
ccgggcggcggaggcctcgcgggtagcccgcagcttgcgcggaggggccgcctcggggct
gccggcagctcggccagggagagcctagagctgaaggacatctttattgcggtgaagact
acgaggaaataccataagagccgtctggacttgctcctccaaacgtggatctcccaggcg
aggggacagacatttatattcacagactgggaggatcgagagctacgcctgaaagcaggg
gatcatatgatcaacaccaactgttccgctgtccatacccggcaagctctctgctgcaag
atgtctgtggaatatgataaattcctggaatctgggcaaaaatggttttgccatgtggat
gatgacaactatgtgaaccctcggactctcctacatctcctgtctgccttctcacacagc
caggatgtctacgtggggcgaccgagtctggaccatcctatcgaagcagctgaccatgtc
caaagtgatggatcaaagacaaccgtgaaattctggtttgccacaggtggagctgggttc
tgtatcagccgaggtcttgccctgaagatgagtccctgggccagcctgggcaatttcatt
agtactgcagaaagagtgcgccttcccgatgactgcactattggctacatcattgaaggg
ctgctggaggtaaagctgctacacagcccattgttccattcccacctggaaaatctgcag
agactgcaaggcgagtctgtgctgcagcaggtaaccctgagttacggtgaccctgagaac
aagcacaatgttgtgagtgtgggaggagtgttcggccttcagcaagatccaacccgattt
aaatctgtccattgtctgctttatcctgacactatctggtgccctgctaagaagatgtcg
taa
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