Sylvia atricapilla (blackcap): 136371609
Help
Entry
136371609 CDS
T10263
Symbol
PKP1
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
sati Sylvia atricapilla (blackcap)
Brite
Cytoskeleton proteins [BR:
sati04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
136371609 (PKP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136371609
NCBI-ProteinID:
XP_066191889
LinkDB
All DBs
Position
25:complement(6082356..6125868)
Genome browser
AA seq
732 aa
AA seq
DB search
MLHSPLKTALAYECFQDQASSTLALPSDHKLKTKGTGKQRVQEQVMMTVKRQKQKSSVSS
SVGHSNRGSMYDGLADGYGYGTSRGSYYTKAQTGNSSWGYPLYNGTLKRDVESRRYSSYS
QMEGWASRAHSKAVSPRAGSDYCFVQNIKSSRSEPDLYCEPPRSTLRKAHGGGRAEHKAT
LNRQSIYSSCSTQQGTSRASKKMPARALSCPSSNKPDVVYAQPMMSCKQDGVYGQAQSSS
KICGDEIDVGTMTIQKAIQLLCSSDDKYQAMGAYYLQHTCFQDESAKQEVYRLGGIAKLV
ELLRSQNQNVQRAAAGALRNLVFKNPTNKIETRRQNGIRECVSLLRRTGNTEIQKQLTGL
LWNLSSTDELKEELIQEALPVLTDCVIIPFSGWSDGSCNRTREIIDPEVFFNATGCLRNL
SSADMGRQTMRNYPGLIDSVMTYAQNCVASNRPDDKSVENCICILHNLSYRLDAEVPNKY
TQLNHMARSVYMDKTLTGCFNSRSGKMENDEYGVPLPEEDFKPKGPSWLYHSDAIRTYLS
LMDQSKKDATLEACAGALQNLTASRGLMSNAMSQLIGLKEKGLPRIARLLQSNSSEVVRS
GASLLSNMSRHPVLHKTMAHQVLPDVSRLLSFQSGNTSSYGEIMTSACYTLRNLIMSNPH
LGKSYLSSNLINNVVSLCRNGSCPKAAEAARLLLTDLWSNRELQSVLKQQGFDKNMMGSL
AGTTFRTLSSRF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgctccactccccgctgaaaacggcgctggcctacgagtgcttccaggaccaggccagc
tccacgctggccctgccctcggaccacaagctgaaaaccaaaggcactggcaagcagcgg
gtccaggagcaggtgatgatgacggtcaagaggcagaagcaaaagtcatcggtgtcatcg
agcgtgggccactcaaatcgaggttccatgtatgatggtttagctgatggttatggctac
gggacatcccggggcagctactacaccaaagcccagacagggaacagcagctggggatat
ccgctgtacaacgggacactgaagcgggacgtggagagcaggcgctacagctcctacagc
cagatggagggctgggccagccgggcacacagcaaggccgtgagcccccgggccggcagc
gactactgctttgtgcagaacatcaagagcagccgcagcgagcccgacctctactgcgag
ccaccccgcagcaccctgcgcaaggcccatggcggcggccgcgccgagcacaaggccacc
ctcaaccgccagagcatctacagcagctgcagcacccagcagggaaccagcagggccagt
aaaaaaatgccagcgcgggccctgtcctgcccctcaagcaacaagcccgacgtggtctat
gcccagcccatgatgagctgcaagcaggacggggtctatggacaggcccagtccagctcc
aagatctgcggtgacgagattgacgttggcaccatgaccatccagaaggccatccagctc
ctgtgctcctccgatgacaagtaccaggccatgggggcttactacctgcagcacacctgc
ttccaggatgagtctgccaagcaagaggtctatcggctggggggcattgccaagctcgtg
gagctgctccgcagccagaaccagaacgtgcagcgggcggcagctggagctctccggaac
ctggtgttcaagaaccccaccaacaagattgaaacccggcggcagaatgggatcagggag
tgcgtgagcctcctccgcaggacagggaacactgaaattcagaaacagctcacaggactg
ctctggaacctctcctccactgatgaactaaaagaagagttgatacaggaggctctgcct
gtgctgacagactgtgttatcatccctttctcgggttggtctgatggcagctgcaacagg
acacgagaaattatagacccagaagtgttcttcaatgccacaggatgtttgaggaacctg
agctctgcagacatggggcgccagaccatgaggaattaccctggcctcatcgactctgtc
atgacttatgcccagaactgcgtggcctccaaccgccccgacgacaagtctgtggagaat
tgcatctgcatcctgcacaacctctcctaccgcctggatgctgaagttcccaacaaatac
acccagctcaaccacatggcccggagtgtttacatggacaaaactctcacagggtgcttc
aacagcaggagtgggaagatggagaatgatgagtatggagtcccccttcccgaggaggat
ttcaaacccaaaggccccagttggctctaccactcagatgccatccgcacctacctgtcc
ctgatggatcagagcaagaaggatgccaccctagaagcttgtgctggagctctgcagaac
ctcactgcgagccgagggctgatgtccaatgccatgagccagttgattgggctgaaggag
aaggggctgcctcgcattgctcggctgctccagtccaacagttctgaggtcgtccgctct
ggggcctctctgctgagcaacatgtccaggcatcctgtgctccacaaaacaatggctcac
caggtgctcccagatgtgtcccgtctcctgtcgttccagtctggaaacaccagcagctat
ggggagatcatgacatcagcttgttacactctgaggaacctcatcatgtccaacccccac
ctgggaaagtcttacctgtccagcaacttgataaataatgtagtgagcctgtgccggaat
ggatcctgtccaaaagcagctgaagctgctcgacttctcctgacagacctttggtccaac
agggagctccagagtgtgctcaagcagcaagggtttgataagaatatgatgggatcttta
gctggaacgaccttcaggaccctctcctccagattttag
DBGET
integrated database retrieval system
