Sylvia atricapilla (blackcap): 136372191
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Entry
136372191 CDS
T10263
Symbol
PLEKHM1
Name
(RefSeq) pleckstrin homology domain-containing family M member 1 isoform X1
KO
K23282
pleckstrin homology domain-containing family M member 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04140
Autophagy - animal
sati05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
136372191 (PLEKHM1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
136372191 (PLEKHM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sati04131
]
136372191 (PLEKHM1)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
sati04990
]
136372191 (PLEKHM1)
Membrane trafficking [BR:
sati04131
]
SNARE
SNARE associated proteins
Others
136372191 (PLEKHM1)
Domain-containing proteins not elsewhere classified [BR:
sati04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
136372191 (PLEKHM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RH_dom
RUN
PH
Zn_ribbon_RRN7
PIRT
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
136372191
NCBI-ProteinID:
XP_066192771
LinkDB
All DBs
Position
27:complement(3975412..3996667)
Genome browser
AA seq
1032 aa
AA seq
DB search
MHSSHPEDPKEAIQLIKKQLVNAIKALQKQYVSSDAVVTSDDSNANTLCSALEAVFVHGL
KAKHIKAESGGKVKKSGGRGPLPQPVFWGLLKSITHRNIVSELEQLMFINTDVGRCRAWL
RLALNDGLMECYLKLLLRDRTRLHEYYQAPALLLDTEECEFLLCYLQGLSSLTFELSYKS
AVLNEWTITPLSLSGLCPVSELLEPLTSSASEPHRKASLGSISQSSGSDEIEIQAPVLPI
SKASSKIKLTSSSLSLNTTSSSQLSSSLGSDSLPPVPCARSLERTEEPLSCDSDLGTATA
EDLDRSLQEVLSEFSKARPSPDAPEGQLLPSVLGCSPRPPPGPPVLPTCPAPTHGIHQQP
PPSSDISAQTGDPAPPGHGDGDASSTSGIPAPRDGLGKAESGGSEGDQAVPSPTAQRLLS
PLLGCPSWISEDDFYRPSPGVSSRSTTDTNGFGPEGDSEGPAPGLISALDLERLSVSSSD
TGKPKMSPEREQKGFSVVHRRQMGLSNPFRGLLKLGSLERRGAMGIWKEFSCELSPLELR
LFLDHEERICVETYSLLRCESLALTHSDGRFELVFLGKKLFLRAPSQDEAEDWLDRIREA
LRKCRPQLEEEDWETLECSEDGGEAQPKGDSSALQYSDGPGNSLDWTSAPEAELDAIKEA
VLYMDVDKTWVPFIFSLSLETLKCFKIRNNDKILSNSYGIETIQDILPDTSLGGPSFFKV
ITSKAVLKLQAENAEEAASWRELVREVLMSYLESAEEALTLGGSLDGHSQVVLKNTVKEN
SFLLQYLVAIPMEKGLDSQSFICAGCSRQIGFSFARPKLCAFSGLYYCDSCHRDEETVIP
SRLIHNWDLTKRGVCKQALKFLTQIRNQPLIDLKLVNESLYEHVERMGRILRSREQLKLL
GDYLIMCRSGALKELSKRLDHRHYLLECPHKYSVADLSQIADGVFETFLQSLLQFASHHV
YSCDLCTQRGFICQICNSSDIIFPFEFDTTTRCSECKTVFHRDCHARAPSCPRCERRQRY
QRQLEASTEPSL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atgcattccagccaccctgaggaccccaaggaagccatccagctgatcaagaagcagctg
gtgaatgccatcaaggccctgcagaagcagtatgtgagctcagatgccgtggtcaccagt
gatgacagcaatgccaacacgctctgcagcgcactggaagctgtgtttgtgcacgggctg
aaggcaaagcacatcaaggcagagagtggggggaaagtgaaaaaatcagggggtcggggc
ccccttccccagccagtcttttggggcctgctgaagagcatcacacatcgaaatattgtc
tcggagctggaacaactgatgtttatcaacacggacgtggggcgctgccgggcctggctg
cggctggcgctgaacgacggcctcatggagtgttacctgaagctgctgctgcgggaccgg
acccggctgcatgagtactaccaagccccagctctgctcctggacactgaagagtgcgag
tttctcctctgctacttgcagggtttatcatccttaacctttgagctctcctacaagtca
gcagttctgaatgagtggaccatcaccccgctgtccctgtcaggtctgtgtcctgtgtct
gagctattggagcccctcacatcctcagcctccgaaccccacaggaaagcatcgctgggc
tccatctcccagtcctcgggctcggatgagattgagatccaagcccctgtcctacccatc
agcaaagccagcagcaagatcaagctcacgtcgtcctcgctgagcttgaacaccacgagc
tcttcccagctctcgtccagcctgggctctgacagcctccccccggtgccctgcgcccgc
agcctcgagcgcaccgaggagccactgtcctgcgactccgacctgggcacagccactgcc
gaggacctggacaggtccctgcaggaggtgttgtctgagttcagcaaggccaggccaagc
ccagacgccccggagggacagctgctccccagcgtgctgggctgctccccccggcctccc
ccgggccccccggtgttgcccacctgcccggcaccgacccacgggattcaccagcaacct
ccccccagcagtgacatctctgctcagacgggagaccccgcaccccccggccatggggat
ggagatgccagcagcacatctggaattccagcccctcgggatggtctgggcaaagcagag
agtggtggcagcgagggggaccaggctgtccccagccccacagcccagcgcctgctctct
cccctgctggggtgtccgagctggatctcagaagatgatttctacagaccttccccagga
gtgagcagcaggagcacaaccgacaccaatggctttgggccagagggggacagcgagggg
ccagccccaggcctcatcagtgctctggacttggagaggctctcagtgtcatcctcagac
actgggaagcccaaaatgtccccagagcgggagcagaagggcttcagcgtggtgcaccgc
agacagatgggtctttccaaccctttccgtgggctgctgaagctgggcagcctggaacgg
cgaggagccatggggatttggaaggagttttcctgtgagctgtccccgctggagctgagg
ctcttcctggaccacgaggagcggatctgcgtggagacctactccctgctgcgctgcgag
tccctggcactgacccactccgacggccgcttcgagctggttttcctggggaaaaagctc
ttcctccgagccccttcccaggacgaggctgaggactggctggacaggatccgcgaggcg
ctgcgcaagtgccggccgcagctggaggaggaggactgggagactctggagtgttccgag
gatggaggcgaagcccagcccaagggcgattccagtgctctccagtacagtgatgggcct
gggaacagcttggactggacttcagctccagaagcagagctggatgcaatcaaagaggct
gttctgtacatggacgtggacaaaacctgggtcccgtttattttttccctgtctctagaa
actctgaagtgctttaaaatcagaaacaatgacaaaattttaagcaacagttatggcata
gagaccatccaggacatccttccagacacaagcctgggaggaccctcgttcttcaaggtg
atcacctccaaggctgtgctgaagctgcaggctgagaatgcagaggaggcagcctcgtgg
cgggagctggtccgagaggtgctcatgtcctacctggagagtgctgaggaggcgctgacc
ctggggggcagcttggatggacactcccaggttgtcctgaagaacactgtgaaggaaaac
agcttcttgttgcagtacctggtggccatccccatggagaagggcctggactcgcagagc
ttcatctgtgcaggctgctcccggcagatcggcttctccttcgccaggcccaagctctgc
gccttctccgggctctactactgcgacagctgccaccgggacgaggagaccgtcatcccc
tcccgcctcatccacaactgggatctcaccaaacgaggggtgtgcaagcaggccctgaag
ttcctcacgcagatccgaaaccagccactgattgacctgaagctggtcaatgagagcctc
tacgagcacgtggagaggatggggcggatcctgcgcagccgggagcagctgaagctgctg
ggggattatctcatcatgtgccgcagcggagccctgaaggagctcagcaaacggcttgat
cacaggcattacctcctggagtgtccccacaaatacagtgtggctgatctgagccagatc
gctgacggcgtcttcgagaccttcctgcagtcgctgctgcagttcgcttcccaccacgtc
tacagctgcgacctgtgcacccagcggggcttcatctgccagatctgcaacagcagcgac
atcatcttcccctttgagtttgacactaccaccaggtgcagtgaatgcaaaactgtcttc
caccgggactgccatgcccgggccccgtcatgcccacgctgtgagcggcggcagcggtac
cagcggcagctggaggccagcacagagcccagcctgtag
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