Sylvia atricapilla (blackcap): 136372275
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Entry
136372275 CDS
T10263
Symbol
BRCA1
Name
(RefSeq) breast cancer type 1 susceptibility protein
KO
K10605
breast cancer type 1 susceptibility protein [EC:
2.3.2.27
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03440
Homologous recombination
sati03460
Fanconi anemia pathway
sati04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
136372275 (BRCA1)
09124 Replication and repair
03440 Homologous recombination
136372275 (BRCA1)
03460 Fanconi anemia pathway
136372275 (BRCA1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sati01009
]
136372275 (BRCA1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sati04121
]
136372275 (BRCA1)
03036 Chromosome and associated proteins [BR:
sati03036
]
136372275 (BRCA1)
03400 DNA repair and recombination proteins [BR:
sati03400
]
136372275 (BRCA1)
Enzymes [BR:
sati01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136372275 (BRCA1)
Protein phosphatases and associated proteins [BR:
sati01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136372275 (BRCA1)
Ubiquitin system [BR:
sati04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
136372275 (BRCA1)
Multi subunit type E3
BRCC complex
136372275 (BRCA1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
136372275 (BRCA1)
DNA repair and recombination proteins [BR:
sati03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
136372275 (BRCA1)
BRCA1-A complex
136372275 (BRCA1)
BRCA1-B complex
136372275 (BRCA1)
BRCA1-C complex
136372275 (BRCA1)
BRCA complex
136372275 (BRCA1)
FA (Fanconi anemia) pathway
Downstream FA components
136372275 (BRCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT_assoc
BRCT
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_2
BRCT_2
zf-RING_UBOX
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-Nse
BRCT_3
zf-RING_6
zf-RING_5
zf-RING_10
RTT107_BRCT_5
zf-MIZ
Zf_2nd_IFT121
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
136372275
NCBI-ProteinID:
XP_066192910
LinkDB
All DBs
Position
27:complement(2149087..2168335)
Genome browser
AA seq
1791 aa
AA seq
DB search
MDFSVITIGQVQNVLSAMQKNLECPICLDLVQEPVSTKCDHVFCRFCMFKLLSKKKKGVV
ECPLCKTEVTKRSLKENSRFKQLIEGLLETIRAFELDTGVKFLKSHHFPKTSTEATAAES
LCKESSVIQSKGFRNRRKSAKENGQENLTLQEAGVNIQLTDAKMCRSRNKPKKSDSQKGI
YIEFGSESSEEFFKQPSKTGFEDKGVVQISSQVRPQGLESAEEGNENSWNAQPDKLCPKE
ITLPDIRGENDVSKECLSKKSTQSFAECAKPDQVNVTECQSSPSNVLTGDLLPEQCDRIG
DTSPTVNGDTSFFKNTEEMDEQQTQYNNENQGFDLEDSSESRLDKNREMDTDVQSVGAVE
ANETENESSHDKELSVEKVPQPERLHSATLNKVSKKRLKQSIQKVNEWFSKSNEILSSGS
SMDESAASADVSGEGDLCLSDKESCISEKTDPMVDSMEIAAVEGKKKWSKEQRAENIKDK
IFGKTYTRGRRSNPPSTLRDVLPTRRTEDVAAEKCQNNFSKDRLKRKRKSTSVLQPEDFI
KKKDTAEADGGPQSVDLGLGDAEKKRSDENVAVKESHLSQNRANNTVTEPEEGGESTLKK
ATEKVTTKHCDEEPEMYNCDQKSTKRRSSAAKRCRHSSRTMCALQLVVDRGSVFPEAAEP
QIDSYPSSGEPRKADSEQNPVRRSRRLQLLSEEMTKQTRKEAKGARKTNSDCGRSVSGDQ
RNVATHSAECKDPCEPQDELSDRPITNLERADLEANEMQIGLKNLCDTAETGKSLFSPSH
QPSNCGSTVPNTSSQDSVIQGSPLLLQLPSVSPGQTASHQTEVVTETPFPQECGYDSQNV
PGDFKAEKLPMAKNILELTKEAEDSDLDTQDLRNIFRPPKRSSFSLFQTARQEGAVEDPA
SETLNLSCAAQVVNKVSQQLQPEGLQEEKAAAQNLSRVSEKEKLKTCESAHVDPVPCFAV
SAGEPWDDISQAAEEGTLTPARTGIAQAEHKSDLLQEEQGSENPVSDETGIASELRQNPT
RSDGSQSDQSSIEKHDSRQNDLNTDQEIVFSSEGNQAGKTAVVACKSTSMICPAACQQSP
AEFGSEVKGNEEAAQSVSTAVPKCSAAGALEEPLGENHDLKGLSETPNGLWSSDTDIEEN
TSLCETDRKEQSAVFGKSDSTLGKELHNGSARSKPRSRGTRRSRRQVQKLPSSDEESCED
EGLPCFQTFVFNKSASTPLQTAKQMTSGPEPPVVECPVSPSVLPHSVKNDGNNVQKVSEA
ALNNVCVSPSQESECSVNLFSSQSNMSEESLNGAQEQKKHSPQAHVSKNMSSVDDREETS
QNCSGGLKTARDECQKDPDIGANLGEASGYDSEISIVEDSCGPFSQAEILTTQQKNAMQN
SLKKLQQEMAALEAVLKQNGSQSCEGLPVHTELPHSSTEGASEMDQKRDENNRSPELLLP
SSKSSLTKKSDLEKGPECDGVVKDKTPSEKTKPVQEAVEEHRQYQLEAENAEEQKSGTRQ
SSASVSSDLFGNVTQGTDNSSCSVRLFTPQTAEATDGAVVAQDSDKSCGLGHKLKSSECF
SAPVLHNATGKENAASPVVTKRKKMSLVASGLSHSEHLVVQKFVKKTQSTLSNHITEGTT
HVVMKTDEELVCERTLKYFLGIAGAKWVVSYQWIIQSFKEGRILDEENFEVRGDVINGRN
HQGPKRARQALTGKIFKDFEICCCGPFTDMTTEHLQWMVELCGASVVKQPDLFSHTANST
AVVVVQPDAWKEDMDYRAIQQLSNVAVVTREWVLDSVACYECQELSAYLMS
NT seq
5376 nt
NT seq
+upstream
nt +downstream
nt
atggacttctcagtgattactattggacaagtacaaaatgtgctttcagctatgcagaag
aacttggagtgcccaatatgcttggatttggtacaagagcctgtttcaacaaaatgtgat
cacgtgttctgcaggttctgcatgttcaaacttctcagcaagaagaaaaaaggtgtggtg
gagtgtcctctgtgtaagactgaagttaccaagagaagtctgaaagaaaattccagattt
aagcaactaattgaaggattgttggaaactatccgtgcttttgagcttgacactggagtg
aagtttttaaagagtcatcactttcctaaaacatccacagaagccactgctgctgagtcc
ctgtgtaaagaaagttctgtcatccaaagtaagggcttcagaaacaggaggaaaagtgct
aaagaaaatggccaagaaaacttgaccttgcaggaggctggtgtgaatattcagcttaca
gatgccaaaatgtgtcgctcaagaaacaaacccaagaaatctgattctcaaaagggtatt
tatatagagtttggttctgaatcatctgaagagttttttaaacagccaagcaaaactggg
tttgaagacaaaggagtggttcagatttcttctcaagtgaggccgcaaggacttgagagt
gctgaggaagggaatgaaaattcttggaatgcacagcctgacaagctgtgtcccaaagaa
ataacactaccagatatcagaggtgaaaatgatgtctcaaaggaatgcttgagcaagaaa
agcactcagagctttgctgagtgtgccaaacctgaccaagtgaatgtgactgaatgccag
agttctccttcaaatgttcttactggagacctgctcccagagcagtgtgacagaataggt
gataccagtcccacagtgaatggggacacatcattctttaagaacacagaagaaatggat
gaacagcaaacccaatacaacaatgaaaaccagggatttgatttagaagatagctcagag
agcaggctggataaaaacagggaaatggacactgatgtacaaagtgtgggagctgtagag
gcaaatgaaactgagaatgagtcttcccatgataaagaactttctgtggagaaggtgcct
cagccagagagacttcactctgccaccctcaataaagtctccaagaagagattgaagcag
agcattcagaaagtcaatgaatggttttcaaaaagcaatgagattttgtcttctggttct
tccatggatgaatctgctgcatcagctgatgtttcaggtgaaggagatctgtgtttatca
gataaagagtcctgtatttcagaaaagactgaccccatggtcgactctatggaaattgca
gcagtggaagggaaaaagaagtggtcaaaagaacaaagagcagaaaacatcaaagacaaa
atatttggaaaaacatacacaagagggaggagatcaaatcccccttctaccttaagagat
gttttgcctactaggagaacagaagatgtggctgctgaaaagtgccagaataatttcagc
aaagacagactcaaacgaaagaggaagagtaccagtgtcctgcaacctgaggatttcatc
aagaaaaaagatacagctgaggcagatggaggtcctcaaagtgttgatttgggccttgga
gatgctgaaaagaaaagaagtgatgaaaatgttgctgttaaggagagtcacctctctcag
aatagagcaaataatacagtaacagaacctgaggaaggaggagagtccacactgaagaaa
gctactgagaaggtcactaccaagcactgtgatgaggaaccagaaatgtataactgtgat
cagaaaagcaccaagagaagaagttctgcagcaaaaagatgcaggcattctagtagaact
atgtgtgctctgcagttagtagtggatagaggctctgttttccctgaggcagctgagcca
cagatcgatagctatccaagcagtggagagcccaggaaagctgattctgagcaaaatcca
gtcagacgcagcaggaggcttcagttactttctgaagaaatgacaaaacaaacaaggaaa
gaagcaaagggagccagaaagactaacagtgattgtggaaggtctgtctctggagaccag
aggaatgtggcaactcactctgctgagtgcaaagacccatgtgagcctcaagatgagttg
agtgacaggccaatcactaatttggagagagctgatctggaagcaaatgaaatgcagatt
ggtctaaagaatttatgtgacactgcagaaactggaaaaagtctgttcagtccttcacat
cagccttcaaactgtggttccactgtgcctaatacaagttctcaagacagtgtaatacaa
ggtagtcctctcctcctacaacttccttcagtgtctcctgggcaaactgcttctcaccag
actgaagtggtgactgaaacaccttttccccaggagtgtgggtatgattcacaaaatgtt
ccaggggacttcaaagctgaaaagttgccgatggctaaaaacattttggagttgactaag
gaagctgaagacagtgacttggacacacaggatctgagaaatatatttaggcctccaaag
cgctcatccttcagcctttttcagactgccaggcaggaaggtgcagtggaagatcctgct
tctgaaaccttaaacctgtcatgtgctgctcaggtagtaaataaggttagtcaacagttg
caacctgaaggcttacaagaggagaaagcagctgctcaaaacttgagcagggtttctgag
aaagagaagcttaagacctgtgagtctgcccatgttgatcctgtgccttgctttgctgtc
agcgcaggagaaccctgggatgacatttcacaggctgcagaggaagggactctgacacca
gcaagaacagggattgctcaggctgagcacaaaagtgacttgctacaagaagagcagggc
agtgaaaatccagtgtcagatgagacagggatagcgagtgagttgagacagaatcccacc
agaagtgatggaagccaaagtgatcagagtagcatagagaagcatgattccaggcaaaat
gatttaaacacagaccaggaaatcgtcttcagttcagaaggcaatcaggcaggaaagact
gcagttgttgcttgcaaatccacatcaatgatttgtcctgcagcttgtcagcaaagccct
gctgaattcggcagtgaagtaaagggcaatgaagaagcagcccaaagtgttagcacagca
gtgcccaagtgttcagctgcaggggcacttgaagaacctcttggagagaatcatgatctt
aaaggtttgtctgaaacccctaatggcttatggagctctgacactgatattgaggagaac
accagcttatgtgaaactgataggaaagagcaatctgcagtgtttggaaaaagtgacagt
accctgggaaaagaactgcacaatggaagtgcaaggtctaagccaagatctcgaggaact
cggaggtctcgaagacaagtgcagaaactgccatcttcagatgaagagtcctgtgaggat
gaagggctaccatgctttcagacatttgtcttcaacaaatcagcaagcacacctttgcag
actgctaaacaaatgacatctgggccagagcctccagtggtggagtgtccagtgagtccc
agtgtgttgcctcacagtgtgaagaatgatggcaataatgtgcagaaagtgtctgaagct
gccctaaataatgtgtgtgtttcaccaagccaggagtcagaatgctctgtcaatttattt
tcttcccagtccaacatgtctgaagaatcacttaatggagcacaagaacagaagaaacat
tcaccacaagctcatgtgtccaaaaatatgagcagtgtagatgacagagaagaaacttct
cagaattgtagtggagggctgaagacagccagagatgaatgccaaaaagacccagacatt
ggagcaaatctaggtgaagcatctggatatgacagtgaaataagtattgtagaagattcc
tgtggaccattctctcaggctgaaatcctcactacacagcaaaagaatgcaatgcaaaat
agcctgaaaaaacttcagcaagaaatggctgcacttgaagcagtgctaaagcagaatgga
agtcagagctgtgaaggtttacctgtccatacggagctgccacattccagtactgaagga
gcatctgaaatggatcaaaagagagatgaaaataacaggtctccagaattgttgcttcca
tcttctaagtcttctttaacaaagaaatcagatctggagaaaggccctgagtgtgacggt
gttgtaaaggacaaaactccctctgaaaagacaaaacctgtgcaggaagcagtggaagaa
cacaggcagtatcagcttgaagcagaaaatgcagaggagcagaaatctgggaccaggcag
agcagtgcatctgtctcatcagatctttttggaaatgtgacccagggtacagataactct
tcgtgctctgtaaggctttttacccctcaaactgcagaagccacagatggggccgttgta
gctcaggacagtgataaaagctgtggcctaggacacaaattaaagagcagtgaatgtttt
tctgcacctgttctgcacaatgcaactgggaaagaaaatgctgcaagtccagttgtgacc
aagaggaaaaaaatgtcacttgtggcatcaggtctgagtcacagcgagcacttggtggtc
cagaagtttgtgaaaaaaactcagagcactttatctaatcacattactgaaggaacaact
catgttgtaatgaaaacagatgaggagctggtgtgtgaacggaccctgaagtatttcctg
ggcattgcaggagcaaaatgggtagttagttaccagtggataattcagtcttttaaagaa
ggaaggatactggatgaggagaactttgaagtcagaggagatgtaatcaatgggagaaac
catcagggtcctaagagggccagacaggctctgactggaaagatctttaaagacttcgag
atctgttgctgtggacctttcactgatatgactacagagcatctgcagtggatggtggag
ctgtgtggtgcctctgtggtgaagcagcctgacctgttctcacacacagcaaattctact
gctgttgtggttgtgcagccagatgcttggaaggaagacatggattatagagcaatccag
cagctcagcaatgttgccgtggtaactcgggaatgggtcctggacagtgtggcttgctat
gagtgccaggagctcagtgcttacctcatgtcctaa
DBGET
integrated database retrieval system
