Sylvia atricapilla (blackcap): 136372299
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Entry
136372299 CDS
T10263
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
sati Sylvia atricapilla (blackcap)
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sati04040
]
136372299 (SCN4A)
Ion channels [BR:
sati04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
136372299 (SCN4A)
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
136372299
NCBI-ProteinID:
XP_066192948
LinkDB
All DBs
Position
27:complement(4079901..4122581)
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AA seq
1843 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPASLAAIEQRMAEAEALRIKRQHVEMPEEEEVKPSSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYMLGPFHPIRRG
AIKILIHSLFSMFIMITILTNCVFMTMSNPPAWSKNVEYAFTGIYTFESLIKILSRGFCI
DDFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPPNSTFLEDLGLDNDTLVN
STFYDFTDDFTGNFTGNFTGNFTSNSTFDFDAYINDEANYYFLEGALDALLCGNSSDAGK
CPEGYECMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFV
VIIFLGSFYLINLILAVVAMAYAEQNDATMLEEQQKEEEFQQLMEQLKKQQEEQERLLQE
RASSSDSLPSSVAGKGHSSDLSSDQDKAKDCNGQVVPKITLQRSDTVVDFNPAYESEKLD
LNHLTVGNQDGPGLEKRVGSAISVISNAVEELEEAHQKCPPWWYKFAHTFLVWNCCLPWV
KLKEFVKLVVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFENVLSVGNLVFTGIFTAEM
VLKLIALDPYEYFQQGWNIFDSFIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPT
LNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISVDCTLPRWHMN
DFFHSFLIVFRILCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLALLLSSF
SADSLAASDDDGEMNNLQIAIGRITRGIAFAKATLLGLLRRLWKGKKVAPEEEQDPSKRD
NSVLNHMDSALEPKSGYLDGITGKEHIFMDELDHMNFINNPNLTVQVPIASEESDLYEET
STQSDTEDTTKNPLSSDNASSMCSTVDYKPPAPEEEEVAEVAEESNEPEECFTEGCVKRF
PCLYVDITSEKGRIWWNLRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIR
TILEYADKVFSYIFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSLVSLTANWLGYSEL
GAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLF
AGKYYRCVNTTTGELFSIDYVNNKSDCMALLYSNEVRWVNVKVNFDNVGLGYLSLLQVAT
FKGWMDIMYAAVDSREIEEQPQYEVNLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQK
KKFGGKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANKFQGKVFDFVTKQVFDITIMIL
ICLNMVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRHYFFTVGWNIFDFV
VVILSILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPAL
FNIGLLLFLVMFIYSIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLL
NPILNSGPPDCDPELENPGSSVKGDCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFS
VATEESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLRVPKPNKIKLI
TMDLPMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTL
KRKQEEVCATKIQRAFRRYLLRRSVKQASYMYRHSQDTLGQDAPEKEGLIATRMQEMYGN
TGTDVETAAALGLEPIPSSETPQDAPEEAQVWDKERVVKESLV
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggccccgagaacctgcgccccttcaccccggcctcg
ctggccgccatcgagcagcgcatggccgaggccgaggcgctccggataaagcggcagcat
gtggagatgcccgaggaagaggaggtcaagcccagcagtgacctggaagctggcaagaac
ctgcccctcatctatggtgacccacccctggagctgattgggacccccctggaagatctg
gaccctttctacaaggacaagaagacgttcatagtcctcaacaagggcaagtcgatcttc
cgcttctcggccacccctgccctctacatgctggggcccttccaccccatccgcagagga
gccatcaaaatcctcatccattcattattcagcatgttcatcatgatcaccattttaacc
aactgcgtgtttatgacgatgagcaaccccccggcatggtccaagaacgttgaatatgcc
ttcactgggatctacacctttgagtctctcatcaagatcctgtcgagaggcttctgcatc
gatgacttcacattcctgcgtgacccgtggaactggctggacttcatggtcatctccatg
gcctacattaccgagttcgtggacctggggaacatctctgctctcaggaccttccgtgtc
ctccgtgccttgaaaaccatcacggtgataccagggctgaagacgattgtgggggctctg
atccagtcggtgaagaagctctcggacgtgatgatcctcacggttttctgcctgagcgtc
tttgccctcatcggcctccagctcttcatgggcaacctccggcagaagtgtgtgcggtgg
cctccccccaacagcaccttcctggaggatctggggctggacaacgacaccttggtcaac
tcaaccttctacgacttcacggatgacttcactgggaacttcactgggaacttcaccggc
aacttcaccagcaacagcacctttgactttgatgcctacatcaacgatgaagccaattac
tacttcctggagggagccctcgacgctctgctctgtgggaacagcagcgatgctgggaag
tgccccgagggctacgagtgcatgaaggctgggaggaaccccaactatggctacaccagc
tatgacaccttcagctgggccttcctggccctcttccgcctcatgacccaggactactgg
gagaacctcttccagctgacactgagggcagcagggaaaacctacatgatcttcttcgtg
gtgatcatcttcctgggctccttctacctcatcaacctcatcctggctgtggtggccatg
gcttatgccgagcagaacgatgccaccatgctggaggagcagcagaaggaggaggaattc
cagcagctcatggagcagctgaagaagcagcaagaggagcaggaaagactgttgcaggag
cgcgcgtccagcagcgattccctgcccagcagcgtggccggcaaggggcacagctcggac
ctcagcagtgaccaggacaaggccaaggactgcaacgggcaggtggtgcccaagatcacc
ctgcagcgatccgacaccgtggttgatttcaaccccgcctatgagtcggagaagctggac
ctcaaccacctcactgtgggcaaccaagatgggccagggctggagaagagggtgggaagt
gccatcagtgtcatttccaatgctgtggaagagctggaagaagctcaccagaaatgccca
ccctggtggtacaaattcgcccacacattcctggtctggaattgctgccttccatgggtg
aagctgaaggagtttgtcaagctggtggtgatggaccccttcgtggacctgggcatcacc
atctgcatcgtgctcaacactcttttcatggccatggagcactaccccatgacagaagag
ttcgagaacgtgctgagcgtggggaacctggtcttcacagggatcttcacagcagaaatg
gttctgaagctcattgctctggatccctacgagtatttccaacagggttggaatatcttc
gacagcttcatcgtcactctgagcctggtggagctgggcttggccaacgtgcagggactc
tccgtgctccgctccttccgcctgctcagggttttcaagctggccaagtcctggcccacc
ctcaacatgctaatcaagatcatcggcaactccgtgggtgccctgggcaacctcacgctg
gtcctggccatcatcgtcttcatcttcgccgtggtggggatgcagctcttcggcaagagc
tacatcgagtgcgtgtgcaagatctccgtggactgcaccctgccccgctggcacatgaac
gacttcttccactctttcctcatcgtcttccgcatcctctgcggggagtggatcgagacc
atgtgggactgcatggaggtggccggccagaccatgtgcctcatcgtcttcatgatggtc
atggtcattgggaacctcgtggtgctaaacctgtttctggctctgctgctgagctccttc
agcgccgacagcctggcagcgtcggacgacgacggggagatgaacaacctgcagatcgcc
attggccgcatcacccgcggcatcgccttcgccaaggccacgctcctcgggctgctccgc
cgcctctggaagggcaagaaggtggccccagaagaagagcaggaccccagtaaaagggac
aactctgtgctcaaccacatggactcggccctggagcccaagtcggggtacctggatggc
atcacaggcaaggagcacattttcatggatgagttggaccacatgaatttcatcaacaac
cccaacctgacggtacaggtccccatcgcctctgaggagtctgacctctacgaggagacc
agcacccagtccgacaccgaggacaccaccaagaaccccctgtccagtgacaatgcctca
tccatgtgcagcacagtggattacaaaccgcccgcacccgaggaggaggaggtggcagaa
gtggctgaggagagcaatgagcctgaggaatgtttcactgaaggctgtgtgaagaggttc
ccctgcctctatgtggacatcaccagtgagaaagggaggatttggtggaacctcaggaaa
acctgcttccgcattgtggagcacgactggttcgagaccttcatcgtcttcatgatcctc
ctcagcagcggggcactggctttcgaggacatctacatcgagcagcgcaaggtgatccgc
accatcctggaatacgcagacaaggtcttctcctacatcttcgtcatcgagatgctgctc
aagtgggtggcctatggcttcaaggtgtatttcaccaatgcctggtgctggctggatttc
ctcattgtggatgtgtccctggtcagcctgacagcaaactggctgggatactcggagctg
ggagccatcaaatccctgcggacactgagggctctgcgacctctgcgcgctctgtcccgg
tttgagggcatgagggtagtggtgaatgccctgctgggcgccatcccctccatcatgaac
gtcctgctggtctgcctcatcttctggctgatcttcagcatcatgggggtgaacctgttc
gcagggaagtactacaggtgtgtcaacaccaccacgggcgagctcttcagcattgattac
gtcaacaacaagagtgactgcatggccctgctctacagcaacgaggtcagatgggtcaac
gtcaaggtcaacttcgacaacgtgggcttgggatacctgtccctgctgcaggtggcaacc
ttcaaaggctggatggacatcatgtacgcagctgtggactcacgtgagattgaagagcag
ccacagtatgaggtcaacctctacatgtacatctactttgtcatcttcatcatctttggt
gccttcttcaccctgaacctcttcatcggcgtcatcatcgacaacttcaaccagcagaag
aaaaagtttggaggcaaagacatcttcatgacagaagagcagaagaaatactacaatgcc
atgaagaagctgggctccaagaaaccccagaagcccatccccaggccagcgaacaaattc
caagggaaggtgtttgacttcgttaccaagcaagtatttgacatcaccatcatgatcctg
atttgcctgaacatggtcaccatgatggtggaaacagatgaccagagcgagctcaaaacc
tctgtcctctacaagataaacctggtcttcatcgtcattttcaccggggagtgcgtgctc
aagatgttcgccctgcgccactacttcttcactgtgggctggaacatcttcgactttgtg
gtggtcatcctctccatcctaggtatcgtcctctcggacatcatcgagaagtactttgtg
tcccccaccctcttcagggtcatccggctggcaaggatcggccgcgtgctccggctgatc
cgaggagccaaaggcatccggacgctcctctttgccctgatgatgtccctgcctgccctg
ttcaacatcggcctcctgctcttcctcgtcatgttcatctactccatctttgggatgtcc
aacttcgcctatgtcaagaaggagtcggggatcgatgacatcttcaactttgaaaccttt
gggaacagcatcatctgccttttccagatcaccacatcagcagggtgggatgggctcctc
aatcccatcctcaacagcggcccccccgactgcgaccctgagctggagaaccccgggagt
tcggtgaaaggagactgtgggaatccctccattgggatctttttcttctgcagctacatc
atcatctccttcctcatcgtggtgaacatgtacattgccatcatcctggagaacttcagt
gtggccacggaggagagcagcgagcccctctgcgaagatgattttgaaatgttttatgaa
acctgggagaagtttgacccagacgccacccagttcatcgcctacagcaccttgtctgac
tttgtggacactttgcaggagccactcagagttcccaagcccaacaagatcaaactcatc
accatggatctaccaatggttgctggggacaaaatccactgcctagacatcctctttgcg
ctgactaaggaagtgctgggagattcaggagagatggatgccctgaaggccaccatggag
gagaagttcatggctgccaacccctcgaaggtttcctatgaacccatcaccaccaccctg
aagaggaaacaagaggaggtctgtgctaccaagatccagagggctttccggagatacctc
ctgaggcgctcggtgaagcaggcatcctacatgtacaggcacagccaggacacgctgggc
caggacgcgcccgagaaggaagggctgatcgccaccagaatgcaggagatgtatgggaac
actgggacagatgtggagacagccgctgccctgggcctcgagcccattcccagctcagag
acaccccaggatgctcctgaggaagcacaggtttgggataaggaacgcgtggtgaaagag
tcactggtgtaa
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integrated database retrieval system
