Sylvia atricapilla (blackcap): 136373012
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Entry
136373012 CDS
T10263
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati00310
Lysine degradation
sati01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
136373012 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136373012 (SETDB1)
Enzymes [BR:
sati01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
136373012 (SETDB1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
136373012 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
136373012 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
Tudor_5
MBD
Pre-SET
Chromo_MORC2_6th
YkyA
DUF4537
Motif
Other DBs
NCBI-GeneID:
136373012
NCBI-ProteinID:
XP_066194040
LinkDB
All DBs
Position
30:1693523..1707486
Genome browser
AA seq
1286 aa
AA seq
DB search
MDSPDIKELQQEVMEELGISMEELQEIIEKEVENSEWVKQRKQQLEELKQCIRHKEEEVA
HVDQLIDEVMRAVNKCEAQAKELYSMMGRQYRDSSSEDEAPAAAEVIEIADEEEDDDVMS
VDSGWKHSSGSPRISRDQSLLREAMAAMRKSARDVAKFMDAVNKKTNLQEAQKDAQPPQE
SPDTAQPVTVPAVPGDDLNTDGDLKVGMRILGKKRTKTWHKGTLIAIQTVGAGKKYKVKF
DNKGKSLLSGNHIAYDYHPSAERHHVGRRVVARYKDGNQMWLYAGIVAETPNLKNKDRFL
IFFDDGYASYVKEWELYPVCRPLKKAWEDIEDVSCRDFIEEYITAYPNRPMVLLKSGQLI
KTEWEGTWWKSRVEEVDGSLVKILFLEALPMGTVSVSFSYPQEDKRCEWIYRGSTRLEPM
FSMKTSTASTQEKKQSGQTRTRPNVGAVRSKGPVVQYTQDLAGAGPQYKTPEQQPAARPA
SPQPAEMESSDTQLAQGRKQVAKKSTSFRPGSVGSGHSSPSSPVLGDTPAAGRALPAPQH
RVPSSSPSQPFHGMMDRVPNEPSYRAPLEKLFYLPHVCSYTCLSRVRPVRSDQYRSRNPL
LIPLLYDFRRMTARRRVNRKMGFHVLYKTPCGLCLRSMHEIERYLFETDCDFLFLEMFCL
DPYVLVDRKFQPYKPYYYIADITKGKEDVPLSCVNEIDNTPPPQVAYSKERIPGKGVYIN
TSWEFLVGCDCKDGCRDKSKCACHQLTIQASGCTPGGQINPNSGYQHKRLEECLPTGVYE
CNKRCKCNVNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDD
FADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDNSGVDLKDDDDNENTGTEELE
ESNEDSSDDNFCKDENFSTSSVLRSYATRRQTRGQRDHGLLETASKDSGLARPLGHDEPT
TAPPCKLPVSEETSKNKVASWLSSNSIAESFQDSDSASSLRTGEGGEAKAVKMVIPAERE
KGSAPTPGDLNGEAKPTKNEEPEEPTTVSGLSGLGRRYGYNPCPPKLDGIRRPVSGTALL
QSRRRSLPLPPPLEDVLTLSSSTDSDGEHRAGQAPGTANDSDDIQTISSGSEEEEGEDKK
NQSSGSGPVKRQVAVKSTRGFALKSTHGIAIKSTPLAAADKGESAGPVRRSTRQFYDGEE
NCYIIDAKLEGNLGRYLNHSCTPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWDY
NYEVGSVEGKELLCCCGAIDCRGRLL
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggattccccggacatcaaagagctgcagcaggaggtgatggaggagctgggaatctcc
atggaggagctccaggaaatcatcgaaaaagaagtggagaattccgagtgggtgaagcag
cggaagcagcagctggaggagctgaagcagtgcattaggcacaaggaggaggaggtggcc
cacgttgaccagctcattgacgaagtcatgagggccgtcaacaagtgcgaggcacaggcc
aaggagctgtactccatgatgggccggcagtaccgggacagcagctcggaggacgaggcg
ccggcggccgcggaagtgatcgagatcgcggacgaggaggaggacgacgacgtcatgagc
gtggactcgggctggaagcacagcagcggcagtcccagaatctccagggatcagagtctg
ctgcgggaagcaatggctgccatgaggaaatctgcccgggatgttgcgaaattcatggat
gctgtaaacaagaaaacgaacttgcaggaagcacagaaagatgcacaaccccctcaggaa
tctcctgacactgcccagcctgtcactgtccctgcagtccctggcgatgatctcaacact
gatggggacctcaaagtgggcatgaggattttggggaaaaaaagaaccaagacgtggcac
aaggggacattgattgccatccagacggtcggtgctggcaagaaatacaaagtgaagttt
gataacaaaggaaagagtttgctctcgggcaaccacattgcctacgattaccacccgtct
gctgagaggcaccacgtgggcaggagggtggtggccaggtacaaggatggcaaccagatg
tggctctatgctgggatcgtagctgagacccccaacctcaagaataaagacaggttcctg
atcttcttcgacgatggctacgcgtcctacgtgaaggagtgggagctgtacccagtgtgc
cggccactgaaaaaagcctgggaagacattgaggatgtttcctgtcgggatttcattgag
gaatacattactgcctaccccaaccggcccatggtgctgctgaagagtgggcagctgatc
aaaacagagtgggaagggacctggtggaaatccagagtggaggaagtggatggaagtctg
gtgaaaatccttttcctggaagctcttcccatgggaactgtgagtgtttccttctcgtac
ccacaagaggacaaacgttgtgagtggatttatcgaggttccacacgcctcgagcccatg
ttcagcatgaaaacttccacagcttccactcaggaaaagaagcaaagtgggcagaccagg
actcgtcccaacgttggtgctgtgaggagcaagggccctgtggtgcagtacacccaggat
ttagcaggagctggtccccagtacaagactccagagcagcagccagctgcacgtcctgca
tctcctcagcctgcagagatggaatcctccgacacgcagctggcccagggcagaaagcag
gtggccaagaaaagcacttccttccgccctggctccgtgggctccgggcactcgtcccca
tcctcccctgtcctcggggacaccccggcagcagggagggcccttccagccccgcagcac
cgcgtccccagcagcagcccctcccagcccttccacggcatgatggaccgcgttcccaac
gagccgtcctaccgcgcccctctggagaaactcttctacctgccccacgtgtgcagctac
acctgcctgtcgcgggtgcggcccgtgcgcagcgaccagtaccgcagccgcaacccgctg
ctcatcccgctgctctacgacttccgccgcatgacggcgcggcgccgcgtcaaccgcaag
atgggcttccacgtgctctacaagacgccctgcgggctgtgcctgcgctccatgcacgag
atcgagcgctacctcttcgagacggactgcgacttcctcttcctggagatgttctgcctg
gacccctacgtgctggtggatcgcaagttccagccctacaagccgtactactacatcgcc
gacatcaccaagggcaaggaggacgtgcccctgtcgtgcgtcaacgagatcgacaacacg
ccgccgccgcaggtggcctacagcaaggagaggatccccgggaaaggggtctacatcaac
accagctgggagttcctcgtgggctgtgactgcaaggacggctgcagagacaaatccaag
tgtgcctgtcaccagctgaccatccaggccagtggctgcactcctggagggcaaatcaac
cccaactcaggctaccagcacaagcggctggaggaatgtctcccaacaggcgtttatgaa
tgcaacaagaggtgcaagtgcaacgtgaacatgtgcaccaaccgcctggtgcagcacggc
ctccaggtgcggctgcagctcttcaagacccagaacaaaggctggggcattcgctgcctc
gacgacattgccaaggggtcctttgtctgcatctacgcagggaaaatcctcacggatgac
tttgctgacaaagaggggctggagatgggtgacgagtactttgccaacctggaccacatc
gagagcgtggagaacttcaaggagggctacgagagcgacgccaagtgctcctcggacaac
agcggcgtggacctcaaggacgacgacgacaacgagaacacgggcacggaggagctggag
gaatccaacgaggacagctccgacgacaacttctgcaaggacgagaacttcagcacgagc
tcggtgctgcgcagctacgcaacgcgccggcagacgcgcggccagcgcgaccacggcctc
ctggagacggcctccaaggactcggggctggcgcggcccctcggccacgacgagcccacc
acggcccctccctgcaagctgcccgtgtccgaggagacctccaagaacaaagtggcctcg
tggctgagctccaacagcatagccgagagcttccaggacagtgacagcgcctcgtcctta
aggacaggcgaagggggagaagccaaagctgtgaaaatggtgatccctgcggagagggag
aagggttctgctcccacgccaggagatctcaacggagaggcaaagccaaccaaaaatgag
gaacctgaagaaccaaccacagtttctgggctgagcggcctggggaggaggtatggctac
aacccctgtcccccgaagctggatgggatccgcagacccgtcagcggcacggcgctgctg
cagagccgccggcgctccctgcccctgccgccgcccctggaggatgtgctgacactgtcg
agcagcaccgacagcgatggggagcacagggcagggcaagccccaggcaccgccaacgac
agcgacgacatccagaccatttcctcaggatccgaggaggaggaaggggaggacaagaaa
aatcagtcatctgggtcaggtcccgtgaagaggcaggtggctgtgaaatccactcggggc
ttcgccctcaagtccactcacggcatcgccatcaagtccacgccgctggcggcggccgac
aagggcgagagcgcggggcccgtgcgccgcagcacgcggcagttctacgacggcgaggag
aactgctacatcatcgacgccaagctcgaggggaacctgggccgctacctcaaccacagc
tgcaccccaaacctcttcgtgcagaacgtctttgtggacacccacgaccttcggttcccc
tgggtcgccttctttgccagcaagaggatccgagctggcacggagctgacctgggattac
aactacgaggttggcagtgtggagggcaaggagctgctgtgctgctgcggggccatcgac
tgcaggggccggctgctctga
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integrated database retrieval system
