Sylvia atricapilla (blackcap): 136374216
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Entry
136374216 CDS
T10263
Symbol
C9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog isoform X1
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati04140
Autophagy - animal
Brite
Membrane trafficking [BR:
sati04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
136374216 (C9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
136374216
NCBI-ProteinID:
XP_066195582
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All DBs
Position
Z:48174843..48190388
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AA seq
481 aa
AA seq
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MSALCPPPSPAVAKTEISLNGESPLLAATFAYWDNILGPRVRHIWAPKTEQILLSDGEII
FLANHTLNGEILRNAESGAIDVKFFVLAEKRVIIVSLIFDGNWNGDRSTYGLSIILPQSE
LGFYLPLHRVCVDRLTHIIRKGRIWMHKERQEHFQKIVLEGTERMEDQGQSIIPMLTGEV
IPVMELLSSMKSHSVPEEIDISDTVLNDDDIGDSCHEGFLLNAISSHLQTCGCSVVVGSS
AEKVNKIVRTLCLFLTPSERKCSRLCRSESSFKYESGLFVQGLLKDATGSFVLPFRQVMY
APYPTTHIDVDVNTVKQMPPCHEHIYNQRRYMRSELTAFWRANSDEEMSQDHIIHTDESF
TPDLNVFQDIVHRDTLVKAFLDQIFHLKPGLSLRSTFLAQFLLVLHRKALTLIKYIEDDT
QKGKKPFKSLRSLKIDLDLTAEGDLNIIMALAEKIKPGLHSFIFGRPFYTSVQERDMLMT
F
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctctttgtccaccaccatctcctgccgttgctaagacagagatctctttgaat
ggcgagtcaccattattagctgccacttttgcttactgggacaatattcttggcccccga
gtgcggcatatctgggctccaaagacagaacagatacttctcagtgatggtgaaatcatt
tttcttgctaaccacaccctgaatggagaaatacttcggaatgcagaaagtggtgccata
gacgtgaagttctttgttttggctgaaaaaagagtaatcattgtgtcattaatctttgat
ggaaactggaacggagacagaagcacgtatggactatcaattatacttccgcagagtgaa
cttggtttctacctgccccttcacagagtgtgcgtggataggttaacacatattataagg
aaaggaaggatttggatgcataaggagagacaagaacatttccagaagattgtcttggaa
ggtacagaaagaatggaggatcagggtcagagcatcattccaatgctgacaggagaagtc
attcctgtaatggaactcctttcatctatgaaatcacacagtgttccagaagaaatagat
ataagtgacacagtgctaaatgatgatgacattggggatagttgccatgaaggctttctc
ctcaatgccattagttcacacctgcagacctgtggttgttctgtagttgtaggaagcagt
gcagaaaaagttaataagattgtgagaacgttgtgtctgtttctcacaccatctgagcgg
aagtgttccagactctgtagaagtgagtcctctttcaaatatgaatcaggactttttgtt
caaggcttactcaaagatgcaaccggaagctttgtgttgcccttccgtcaagtaatgtat
gccccataccctactacacatatagatgtggatgtcaatacagtgaagcagatgccccct
tgtcatgaacacatctataaccaacgacgatacatgagatctgaactgacagcattttgg
agagctaattcagatgaggaaatgtctcaagatcatattatccatactgatgagagtttc
acacctgatttaaatgtctttcaagatattgtgcacagagataccttggtaaaagccttt
ctggatcagatctttcacctgaagcctggcttgtctctaaggagtactttccttgcacag
tttctgctagtccttcacagaaaagccttaactttaataaagtacatagaggatgacacg
caaaaaggcaaaaaaccattcaagtctcttcgtagcttaaagatagatcttgacttgaca
gcagagggcgatcttaacataataatggctttggctgagaagattaaaccaggtctacac
tcctttatctttgggaggccgttctacactagtgtacaggaacgtgacatgctcatgaca
ttttaa
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