Sylvia atricapilla (blackcap): 136374478
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Entry
136374478 CDS
T10263
Symbol
PRDM6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati00310
Lysine degradation
sati01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
136374478 (PRDM6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sati03000
]
136374478 (PRDM6)
03036 Chromosome and associated proteins [BR:
sati03036
]
136374478 (PRDM6)
Enzymes [BR:
sati01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
136374478 (PRDM6)
Transcription factors [BR:
sati03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
136374478 (PRDM6)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
136374478 (PRDM6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
zf-H2C2_2
SET
zf-C2H2_jaz
Zap1_zf1
zf-C2H2_11
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
136374478
NCBI-ProteinID:
XP_066195954
LinkDB
All DBs
Position
Z:complement(26218196..26293366)
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AA seq
573 aa
AA seq
DB search
MLKPGDPGGSAFLKVDPAYLQHWQQLFPQSSQLKSSGPLAQLQPPERAEPSADSLRQRPT
SLSSASSSSSSSTPSSSSTSSCVAAAAASLAGLTSLPVTQLPVFGPLQSSELPTAGAPAS
LQSKDLCGAASGGGKCGDRGAVRYRCTAEELDYYLYGQQRMEIIPLNQHTSDPNNRCDMC
ADNRNGECPMHGPLHSLRRLVGTSSAAAAAPPPEIPEWLRDLPREVCLCTSTVPGLAYGI
CAAQRIQQGTWIGPFQGILLLPEKVQAGAIRNTQHLWEIYDQDGTLQHFIDGGEPSKSSW
MRYIRCARHCGEQNLTVVQYRSNIFYRACIDIPRGTELLVWYNDSYTSFFGIPLQCIAQD
ENLNVPSTVMEAMSRQDTLQPFNKSNKLSPATPQRSVVFPQTPCSRNFSLLDKSGSIESG
FNQISVKNQRVLASPTSTSQLNSEFSDWHLWKCGQCFKTFTQRILLQMHVCTQNPDRPYQ
CGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTHTGEKPFKCERC
ERSFTQATQLSRHQRMPNECKPITESTESIEVD
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagcccggagaccccggcggatccgcgttcctgaaggtggatcccgcctatctg
cagcactggcagcagctattcccgcagagcagccagctcaaaagcagcgggcccctcgcc
cagctccagccgcccgagagagccgagccttcggctgacagcctccgccagcgcccgacc
tccctctcctccgcctcctcctcctcttcctcgtccactccgtcttcctcctccacctcg
tcgtgcgtcgccgcggcggcggcttctctggctggtttgacctccctgcctgtgacccag
ctcccggtcttcggcccgctgcagagctcggagctcccgaccgcgggagcgcccgcttcc
ctgcagagcaaggatttgtgcggggctgccagcggcggcggcaaatgcggcgaccgcggt
gccgttcggtaccgctgcacggccgaggagctggactactacctgtacgggcagcagcgc
atggagatcatccccctgaaccagcacaccagcgaccccaacaaccgatgtgacatgtgc
gctgacaaccgcaatggtgagtgccccatgcacgggcccctgcactccctgcgccggctg
gtgggcaccagcagcgcggccgccgcagcgcctcctcccgagatcccggagtggctccgg
gacctgccccgagaagtgtgtctgtgcaccagcacggtgcctggcctggcctatggcatc
tgtgcggcacaacggatccagcagggcacctggattgggcccttccagggaatcttgctc
ttgccagagaaggttcaagcaggtgccatcaggaacactcagcatctctgggaaatatat
gaccaagatgggacactgcagcactttatcgatggtggagaacccagcaagtcaagctgg
atgaggtacatccgatgtgccaggcactgtggggagcagaacttaacggtggttcagtac
aggtcaaacatattctaccgggcttgtatagatatccccaggggcactgagctgttagtg
tggtacaatgacagctacacatctttcttcggaatccctctccagtgcattgcacaagat
gaaaatttgaatgtcccttcgactgtaatggaggccatgtccagacaagacaccctacag
ccatttaataaaagtaacaaactatcccctgccactccacagcgatccgtagtatttcca
cagactccgtgtagcagaaatttttctctcctggataagtctgggtccatcgagtcagga
tttaaccagatcagtgtcaaaaaccaacgagtccttgcaagcccaacttcaacaagccaa
ctaaattctgagttcagtgactggcatctttggaaatgtgggcaatgctttaagactttc
acccagcggatcctcttacagatgcatgtgtgtacacagaaccccgacaggccctaccag
tgtggtcactgctcccagtccttctcgcagccttcagagctgaggaaccacgttgtcacg
cactccagcgacaggcctttcaagtgcggctactgtgggcgcgccttcgctggtgccaca
acactcaacaaccacatccggacacacactggggaaaagcccttcaagtgcgagaggtgt
gagaggagcttcacacaagccacccagctgagtcgacaccagaggatgcccaatgagtgc
aagccaataacagagagcacagaatcaattgaagtggattaa
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