Sylvia atricapilla (blackcap): 136375606
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Entry
136375606 CDS
T10263
Symbol
PHC1
Name
(RefSeq) polyhomeotic-like protein 1 isoform X1
KO
K11456
polyhomeotic-like protein 1
Organism
sati Sylvia atricapilla (blackcap)
Pathway
sati03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sati00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
136375606 (PHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sati03036
]
136375606 (PHC1)
Chromosome and associated proteins [BR:
sati03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
136375606 (PHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
zf-FCS
zf-CGNR
Motif
Other DBs
NCBI-GeneID:
136375606
NCBI-ProteinID:
XP_066197310
LinkDB
All DBs
Position
2:28466316..28479382
Genome browser
AA seq
1009 aa
AA seq
DB search
METESEQNSNSTSGSSSSGGSTRPQISQMSLYERQAVQALQALQRQPNAAQYFHQFMLQQ
QFNSAQLHSLAAVQQATIAASRQASSPNTSTSQQTTTTQASLHANSDCQAQHTNEINLAT
TSAAQLISRSQSVSSPSATTLTQSVLLGNTTSPPLNQSQAQMYLRPQLGNLLQVNRTLGR
NVPLASQLILMPNGAVAAVQQEVPPTQSPGVHADTDQVQNLAVRSQQTSATNAQLQGSAQ
KTALPGSSPASGLAPAAGTGQAMAVAQASSSGPGQSLNLSQGAAGSNGVSGGVVAGGGSQ
PSMGLSQSSSAGAAGGCQRKGTGVVQPLPVAAAQAVTVSQGSQTETENAAAKKGDTDSGG
QQTVGMNLTRTATPAPSQTLISSATYTQIQPHSLIQQQQQIHLQKQVVIQQQIAIHHQQQ
FQHRQSQLLHTATHLQLAQQQQQQQAASLTQQQQQAQPPQQQAPPQSQQQAQTLVVQPML
QSQPQHLQLQQDSPCQPATKSPVPIQSKSLVTPIKPPQLGPAKMSATQQPPPHIPVQVVG
TRQQGSGQAQALGLAQIAAAVPTSRGMPAVVQPVSQTHAASPSSSSAPASSQDAPPLTTG
VNLAQVQGTAHMVKSPASSPVMAQMPAAFYMQSVQLPGKSHTLAVKRKAESEEEKEEPPS
VTALLPARSSPVTDCPKNMEEKSGLGDNSDTAAIATPNATSSEGGSATPTSASTPNLALV
SRQMGDSKPPQAIVKPQILTHIIEGFVIQEGAEPFPVGCSQLLKESEKPLQGEAPSGQNE
NMSSNSLGEDSASMELDKKANLLKCEYCGKYAPATQFRGSKRFCSMTCAKRYNVSCSHQF
RMQRKKMKEFQEANYARVRRRGPRRSSSEIARTKIQGKRHRGQEDSSRGSDNSSYDEALS
PTSPGPLSVRASHGERDLANSNMAPPTPDLHGINPVFLSSNPSRWSVEEVYEFIASLQGC
QEIAEEFRSQEIDGQALLLLKEEHLMSAMNIKLGPALKICAKINVLKET
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgaaagtgagcagaactccaactccaccagtgggagctccagttctggagga
agcacccgtcctcagatctcgcagatgtctctctacgagcgacaggcagtacaggccctg
caggcactccagagacagcccaatgcagcccagtacttccatcagtttatgctccagcag
cagtttaacagtgcccaacttcacagcctggctgctgtccagcaggctacaattgcagcc
agtagacaggccagctcccccaacactagcacctcacaacagaccaccaccacccaggct
tctttgcatgctaacagtgattgtcaagctcagcatacaaatgagatcaaccttgccacc
acgtcggctgctcagctgatcagtcgctcccagagcgtgagttccccgagcgccacaacg
ctgacccagtctgtgctcctggggaacaccacctcaccacccctcaaccagtcacaggca
cagatgtaccttcggccgcagctggggaacctgttgcaggtgaaccggacgttgggccgc
aatgtgccgctcgcctcccaactcatcctaatgcccaacggggctgtggctgctgtccag
caggaggtaccacccactcagtctcctggggtccatgcagacacagaccaggtgcagaac
ttggctgtgaggagccagcagacctctgccaccaacgcccagctccaaggctctgctcag
aagacagccctgccaggaagctccccggcttcgggcttagcgccggccgccggcacgggc
caggccatggcagtggcccaggcctcctccagcgggccggggcagtccctcaacctgagc
cagggagcagcaggcagcaacggtgtctccgggggcgtggtggccggtgggggcagccag
ccctccatgggactgagccagagctcctcggcaggtgccgctggcggctgccagaggaaa
ggcaccggggtggttcagccgctgccggtggcggctgcccaagccgtgactgtcagccag
ggcagccagacagagacagagaacgcagctgcaaagaagggtgacacagacagcggtgga
cagcaaacggtgggcatgaacctcactaggaccgctacaccagcacccagccagacactg
atcagctcagcaacatatacgcagatccagccacactcactgatccaacagcagcagcag
atccatctgcagaagcaggtggtgatccagcagcagatagccattcatcaccagcagcag
ttccagcaccgccagtcccagctcctccacacagccacccatctccaactggctcaacag
cagcaacagcagcaagcagcatctctgacccagcagcagcagcaagctcagcctccgcag
cagcaggctcccccccaaagccagcagcaggcacagacccttgtggtgcaacctatgttg
cagtcccagccacagcatttacagctccagcaggacagtccgtgccagccagccaccaag
tcacctgttcctattcagtcaaaatctctggtcacccccatcaaaccccctcagcttggg
cctgccaaaatgtcagcaacacagcagcctccgccacacatcccagtgcaggtcgtgggc
actcggcagcagggctcaggccaagcccaggcactgggcttggctcagattgctgcagca
gtgccgacgtcccggggaatgccagctgtagtccagcctgtttcccaaacccatgctgct
tccccatcatcatcttcagctccagcatcctcacaggacgctccccctctcaccacgggg
gtgaatttggcacaagttcaaggcacagcccacatggtgaagagcccagcttcctctcca
gttatggctcagatgccagcagcattctacatgcagtctgtccagttgccaggcaaatct
cataccttggcagtgaagcgcaaggcagagtcagaggaggagaaggaggagccgcccagt
gtcactgcactcctgcctgccaggtcctctcctgtaacagactgccccaaaaatatggag
gagaagagtggccttggagataattctgatactgctgccattgcaaccccaaatgccaca
tcaagtgaaggaggctcagccacccccacctctgcttccaccccaaacctggcactggtg
tcacgtcagatgggagactccaagcctcctcaagccatcgtcaagccccagatcctcaca
cacatcattgaaggctttgtcatccaggagggagcagagccctttccagtgggttgttct
cagctgctgaaagaatctgagaaaccactgcagggagaggctccttctggccagaatgaa
aacatgtccagcaattctctgggagaggatagtgcttccatggagcttgacaagaaggca
aacttgctgaagtgtgaatattgtgggaaatatgccccagcaacccagttccgtggctcc
aagaggttttgttccatgacctgtgctaaaaggtacaacgtcagctgcagccatcagttc
cggatgcagagaaagaagatgaaggaattccaggaagccaactatgcccgtgtgcgccga
cggggaccacggcgcagcagctctgaaattgcacgaacaaagatccagggcaagcgccac
agaggccaggaagactcaagtcgaggttctgataactccagctatgatgaagctttgtcc
cctacatctccaggacccctgtcagtaagggccagtcatggagagagggacctggcaaac
tctaatatggccccccctaccccagatctacatggcatcaacccagtcttcctctccagc
aatcctagtcgttggagtgtggaggaagtgtacgagttcattgcatcattgcaagggtgc
caggaaattgctgaggaatttcggtcacaggaaattgatggtcaggccctgttgcttctg
aaggaggaacatctcatgagtgccatgaacatcaagctgggaccagctctcaagatctgt
gccaagatcaacgtcctcaaggagacctaa
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