Shewanella avicenniae: JYB87_03620
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Entry
JYB87_03620 CDS
T07845
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
savi
Shewanella avicenniae
Pathway
savi01501
beta-Lactam resistance
savi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JYB87_03620
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JYB87_03620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_03620
01504 Antimicrobial resistance genes [BR:
savi01504
]
JYB87_03620
Transporters [BR:
savi02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB87_03620
Antimicrobial resistance genes [BR:
savi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
JYB87_03620
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
JYB87_03620
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
JYB87_03620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Sec10_N
Motif
Other DBs
NCBI-ProteinID:
QSX34351
LinkDB
All DBs
Position
836056..837513
Genome browser
AA seq
485 aa
AA seq
DB search
MEVDVTHHVRPKWQPLALVSLAVFGVLGLNGCALHDADAQVSALQQSSAPAFAKAFAEQN
EISWPTSAWWQRYQDAQLNALVEHALAQAPTIKMAAARVQQAQAMTQQVGAAELPQLGMA
ASASETKVSYRYQAYNPPKNWNDYGSLTLNFSYDIDFWNKNKSAVAAASSEYAAALAEQA
SAQLMLTTAIANAYAELARLYANLDTVTAALQVRQKTAELLTQRFDNGLENRGTVSQAQA
VAKSANAEVLAVQESIMLQKHALAALLGAGPDQALTIDRPAIQLSQSFGLPANAGLGLLA
HRPDVTAARWRAQAAAYQIGVAKAQFYPDVSLSAFVGIQAFGLNSLFDSGNDAGSVGPAI
YLPLFSGGRLQGQLSAAEAGFDLAAASYQQTLANALQEVADVLTSTQALDGQISETQAAV
DAAEEAHQIASNRYRGGLATYLEVLTAEDRLLGSKRALVNLQSRAFSLDLALVHALGGGY
QSHQS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggaggttgatgtgactcatcacgtacgccccaagtggcaaccgctggcattggtgtcg
ctggctgtttttggggttttagggctcaatggctgcgctttgcatgatgccgatgcgcaa
gtatctgctctgcagcaaagcagtgcgccggcatttgccaaagcatttgccgagcaaaat
gaaattagttggccaaccagcgcttggtggcagcgctatcaggacgcgcagctcaatgcg
ttggtggagcatgcgttagcgcaagcgcctaccatcaaaatggccgcagcccgagtacag
caagcacaagcgatgacgcaacaagtgggagcggctgagttgccgcagcttggtatggca
gcatcagcctctgagactaaagtcagctatcgctatcaagcctataatccgccgaaaaat
tggaacgattatggctcgctgacgttgaacttcagctatgacatcgatttctggaacaag
aataagagtgcggttgccgcagcctcatcggaatatgctgctgcactggcggagcaggct
tctgctcagttaatgctcaccacggccatcgccaacgcttatgcagaattagcacgcttg
tacgccaacctcgataccgtgacagccgcactgcaagtacgccagaaaaccgcggagttg
ttgacgcagcgatttgataacggcctagaaaaccgtggcactgttagccaagcgcaagcg
gtggccaaaagcgctaacgctgaagtattagcggtgcaagagtccatcatgttgcaaaaa
catgcattggcagcgttgttaggcgcagggcctgatcaagccttaaccatcgaccgtcca
gcaattcaattgagtcaaagctttggtttacctgcaaacgcgggattgggcttgctagcg
catcgccctgatgtcaccgcggcacgctggcgcgcacaagcggcggcttaccaaattggc
gtggccaaagcgcagttttaccccgatgtcagcctgtcggcatttgttgggatacaagcc
tttggacttaacagcctgtttgatagtggcaacgatgctggcagtgttggcccagcgatc
tatctgccgctgttctctggtggtcgtttacaaggacagttgagcgctgcagaagctggg
tttgatttggctgctgccagctatcaacaaaccttggccaatgcgctgcaagaagtagcc
gacgtgctcaccagcacgcaagcgctggatggtcagattagcgaaacccaagccgctgta
gatgccgcggaagaggcccatcaaatcgccagcaatcgctatcgcggcggtttggcaacc
tatcttgaagtgttgactgccgaagaccgcttgcttggtagtaagcgtgccttggttaat
ctgcaatcgcgggcattttcgttagatctggcgctagtacatgcgttgggcggcggttat
caatcacatcagtcttag
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integrated database retrieval system
