Sphingobacterium bambusae: SCB77_17565
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Entry
SCB77_17565 CDS
T09645
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam01501
beta-Lactam resistance
sbam01503
Cationic antimicrobial peptide (CAMP) resistance
sbam02020
Two-component system
sbam03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SCB77_17565
09132 Signal transduction
02020 Two-component system
SCB77_17565
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCB77_17565
01503 Cationic antimicrobial peptide (CAMP) resistance
SCB77_17565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbam02000
]
SCB77_17565
02044 Secretion system [BR:
sbam02044
]
SCB77_17565
01504 Antimicrobial resistance genes [BR:
sbam01504
]
SCB77_17565
Transporters [BR:
sbam02000
]
Other transporters
Pores ion channels [TC:
1
]
SCB77_17565
Secretion system [BR:
sbam02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SCB77_17565
RTX toxin transporter
SCB77_17565
Multiple protein transporter
SCB77_17565
RaxAB-RaxC type I secretion system protein
SCB77_17565
Antimicrobial resistance genes [BR:
sbam01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SCB77_17565
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SCB77_17565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
WPL47758
LinkDB
All DBs
Position
4231424..4232776
Genome browser
AA seq
450 aa
AA seq
DB search
MIRKLSSCLFAWLVFVCFGCPVALAQLSLEHAIQTTLDRNLQIRQAQFGYQISEQTLYQS
KSELYPNLSFGFNGGYNYGLIFDQTTGQLIRGSSNTSAGANIGSSVAVFQGFQKINQIKA
NKIQLSIDASEVDKIKNDLILSVVTNYLEAITNGELHEAAKQQVKLSREQLRQDSIQFAV
GNKTVADLAQSENQVATDELSIMTSENAYELSLLNLKQLMEMSPDTIFTLEKPDIAEIMA
EYAILSFDDVFEKALDTQPIVEQAGYNIALAKKNIDIAKGGYYPSITLSTGYGTNYSSQF
LNMQTLNPLPFFTQFNRNKTFQSQLGVNVPIFNNNRTKVAVNKAKLSFLQAQTEDAITRR
NLQKTIGQAILDLKFANKQYFTSQVAFNSSRVAFEAIKERYDVGMANSMEMFTAQTNMNR
AEFDMIRRKYEMVFRGKVIDYYIGNPITFN
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgatacgaaaattatcgtcctgtctctttgcttggttggttttcgtctgttttggatgc
cccgtagctctagcgcagctgagcctagagcatgccatacagacgacactcgatcgtaat
ttgcaaatacgccaagcacaatttggttatcaaatcagtgagcagacgctctaccaatcc
aagtcggagctttatccaaatctgtcgtttggttttaatggcggctacaattatggtttg
atcttcgatcaaacgacaggacagttgattcgtggtagttcgaacactagcgccggtgct
aatataggctctagtgtggcagtgtttcagggctttcagaaaattaatcagataaaagct
aataaaattcagctatccatcgacgcttctgaagtcgataagataaagaatgatctcatt
ctttccgttgtcacgaattacttggaagcaataaccaatggggagttgcatgaggcggca
aaacaacaggttaaactctctcgggagcaattgcgacaggatagtatacagttcgccgtc
ggcaataaaaccgtggccgatcttgcgcagtctgaaaaccaagtggctaccgatgaactc
agcatcatgacttcggagaatgcttacgagctttctttgttgaatctaaaacagttgatg
gagatgtctcctgatacaatttttacgctcgaaaagccagatattgcggagattatggcc
gagtatgcgattttatcatttgatgatgtgtttgaaaaagcactcgatacacagcctatt
gtggaacaggccggatataacatcgctttggccaaaaagaacatcgatattgccaaaggt
ggttattatccttcaattactctatctacgggttatggtacaaattattcctcgcaattc
ctgaatatgcaaacgttaaaccctttgcctttcttcacccaatttaatcgaaataaaacc
tttcagagccaactgggcgtcaacgtgccgatatttaataataaccgaaccaaggttgcg
gtaaataaggcgaagctaagtttcctgcaggcgcaaacggaagatgctatcacacgccgg
aatttacagaaaaccattgggcaggcaatcttggatctcaagtttgccaacaaacagtat
tttacctcgcaggtggcattcaattcttcgcgagtggctttcgaagcgataaaggaacga
tacgatgtgggaatggctaattctatggagatgtttacagcacaaacaaatatgaacaga
gcggagtttgatatgatacgccgtaaatatgaaatggtattccgaggaaaggtaatagac
tactacattggcaatccaataacatttaattaa
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