Sphingobacterium bambusae: SCB77_21860
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Entry
SCB77_21860 CDS
T09645
Name
(GenBank) TolC family protein
KO
K12340
outer membrane protein
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam01501
beta-Lactam resistance
sbam01503
Cationic antimicrobial peptide (CAMP) resistance
sbam02020
Two-component system
sbam03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SCB77_21860
09132 Signal transduction
02020 Two-component system
SCB77_21860
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCB77_21860
01503 Cationic antimicrobial peptide (CAMP) resistance
SCB77_21860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbam02000
]
SCB77_21860
02044 Secretion system [BR:
sbam02044
]
SCB77_21860
01504 Antimicrobial resistance genes [BR:
sbam01504
]
SCB77_21860
Transporters [BR:
sbam02000
]
Other transporters
Pores ion channels [TC:
1
]
SCB77_21860
Secretion system [BR:
sbam02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SCB77_21860
RTX toxin transporter
SCB77_21860
Multiple protein transporter
SCB77_21860
RaxAB-RaxC type I secretion system protein
SCB77_21860
Antimicrobial resistance genes [BR:
sbam01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SCB77_21860
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SCB77_21860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
T3RM_EcoP15I_C
RedAm-like_C
Motif
Other DBs
NCBI-ProteinID:
WPL48598
LinkDB
All DBs
Position
complement(5276020..5277372)
Genome browser
AA seq
450 aa
AA seq
DB search
MKIIFSILIALLLVQWSIAQQPTHPTTSSSVQAWSLEDCIHYALINNVQLNQSKLDLSTA
ENNLQQAKNNRLPTLAANVLQQHATGRTIDPITSDFINARLRSTSLAASANITLWNGGFL
KTDIQKNKLMVTQNQFFVDRAKNDIVLTTIQAYMTALTLYESIGIAEKTIANALEQYRAA
KGRHAVGTLSSIDLSTYKAQLSTDTLTLINAENEYRSQVLELKQLLEIPPSDSFDIQKIA
LQEQAYPIPTTAELYNEIKEHMPETKLSHVDLHLKETELKLAKSGYYPKLSLRGGMMSGY
TNTQFFGFARQLQNNFSPNVALDLSIPIFAQFTNRTNVKNAKLAIQRAALESKKQDRELY
GTLEKLLQQSRSATAQLRAARDAEQAASLSYQLANRKNSLGALSLAELIVIKNEYLNAAD
KYLQAKLTFALYQKLIAFYQAQTTTDQNQR
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataattttttctatactgatcgcattgttgctcgtgcaatggagcattgcgcag
caacctacacacccaaccactagctcatccgtccaagcttggagcttggaagactgcata
cactatgcgctaataaacaatgtgcagctcaaccagagcaagctcgacctttccaccgca
gagaataatctccaacaggcgaagaacaacaggctgccgacactagcggccaatgtgctg
caacagcacgctacaggcagaacgatagaccccataaccagcgattttattaacgcacgg
ttacgctccaccagcttagccgcctcggccaacatcacgctatggaatggcggattccta
aaaacggatatacaaaagaacaagctaatggtaacgcaaaaccagttcttcgttgatcgt
gctaaaaatgacatcgtgctcacaacaatccaagcctatatgacggcactaacactatat
gaaagtataggcattgcagaaaagacgatcgccaatgccttggaacaatatcgggcagcg
aaaggacgacatgccgtgggcacgctgtccagcattgacctatctacctacaaggcacag
ctttccactgatacgctgaccttaatcaacgccgaaaacgagtaccgctcgcaggtgctg
gaattgaagcagctactcgaaataccgccgagcgatagcttcgacatccaaaaaatagcc
ctgcaggagcaggcttatcccataccaaccacagccgagctctacaacgaaataaaagaa
catatgcctgaaaccaagctttcccacgtggacttacacctcaaagaaacagaactcaag
cttgccaaaagtggctattaccccaagctgagcttgcgcggcggcatgatgagcggatac
accaacacacaattttttggcttcgcccgacagcttcaaaacaacttttcgcccaatgtg
gctctcgatctcagcataccgatattcgcccaatttaccaaccgtacgaacgtcaaaaat
gcgaagttagccatacagcgtgcagcgctggaaagcaagaagcaggatcgcgaactgtac
ggcaccttggaaaagctcctgcaacagtctcgctcggcaacggcacagctgcgtgctgcg
cgtgatgccgagcaggctgccagcctatcctaccaactggccaatcgaaaaaacagcctg
ggcgccctgagtttagccgaattgatcgtcatcaagaacgagtacctcaacgctgccgac
aaatatctgcaggccaaactcaccttcgccctttatcaaaaactgattgcattctatcaa
gcacaaacaacaacagatcaaaaccaacgatga
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