Syngnathoides biaculeatus (alligator pipefish): 133500882
Help
Entry
133500882 CDS
T09681
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase isoform X1
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04622
RIG-I-like receptor signaling pathway
sbia04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
133500882 (adar)
04623 Cytosolic DNA-sensing pathway
133500882 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133500882 (adar)
Enzymes [BR:
sbia01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
133500882 (adar)
Spliceosome [BR:
sbia03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133500882 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
DSRM_2
LexA_DNA_bind
Motif
Other DBs
NCBI-GeneID:
133500882
NCBI-ProteinID:
XP_061676102
LinkDB
All DBs
Position
5:28272490..28291827
Genome browser
AA seq
1287 aa
AA seq
DB search
MSRGRGGPYKEQYQRHPPSYLQAKEYYERAGPSTSFPRSGPQLQQLPPNFCNRPVCPLAS
TQPPSPVSPFVAPIPNATKKPPIPNTTNSFHYLQVQFLRGQCAEAPQFKFSRPEPGHSTN
SSFQLQSAYSRHPKPHCATSYYNQVPSSAGCLNKQQVQGTYQSSNSELSIPADALCNSFQ
TLSLYQNKPNSEERSFGRPPTSFVRSRPRIITLTPEIQDQVHRALKPIRSVSAKLLGKKL
HLPKKIVNQALYSLERLQKVSKQGLSPPKWTLYINPIEGEEHQRCFSGKPKQLDVKLEIK
GVIEEECDTETQFRCSSSESSVSEESHSSGQSLQHQPFTMSDQKQLVLQRLLELAPVTAL
VLAKNMGLRSSKQVNSTLYTLEKKGEVVRVSNRDVNPPTWELSAHRKERMMRTLKAAKSS
QMEERGVEEKPALLPEPMSELEPLPFDESWIPKTEVLSPTTVEPPSLNSSQEEVTVEGQW
ACDDIPEYLNAIRKQTDSERSIADNCNPVGTVAVSLAAPPAQNLWAKLQEVRLKNPVSGL
MEYAQYLGQSCEFILLDQSGPSHDPRFRMQVMLNGRLFPVAEASAKKVAKKDAAAATLLV
LFGEMQGGVSSGNEGSTAGINQTMDILSKSGGTIEGSGGAFGAGTVEVMGMPEGPHQPLS
RSLPGGKNPVSVLMEYSQRSGNPIEFIITGQVGPPHDPRFMYRVKVGENLFAEASAPSKK
AARQLAAEEAVKELMADGRLQLNKPQLPLGSSSDSDSCGTCPSLPPLTADELRAAHEAGV
GDLINHLNNNAVSGLLEYARARGFAAEIRLVGQSGSAHEPKFTYQAKLGGRWFPPVCASN
KKQGKQEAADAALRVLIGEAERAARTGELIPAELPVSGSTLHDQIAMLSHQRFNALTTRI
QHSLLGRKILATIVMRRGEGLGTVVSLGTGNRCVKGEELSLKGDTVNDGHAEIISRRGFV
RFLYSELLKHFEGTDNSIFEVMEDNKLRIKTDITFHLYISTAPCGDGALFDKSCSETGEE
VGCHQPLFENAKQGKLRTKVENGEGTIPVESSAIVPTWDGIQHGERLRTMSCSDKILRWN
VLGLQGALLTHFLHPIYLKSITLGYLYSHGHLTRAVCCRLARDGEAFSQSLPPPFQLNHP
EVGRVSVYDSTRHTGKTKESSVNWSLPDHTSVEVLDGTKGKLDGNKLAVSRVSKSNLFCL
FRTLCQRCGRTDLLSMHSYSQAKLASSSFQLAKHRFFQALGDHGYGAWIGKPLEEKSFEA
REETASVTAAFGSCRNGGAMEYNLAEA
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtagaggagggccttacaaagaacagtaccaacggcacccaccatcctat
ctccaggcaaaggagtattacgaaagagctggcccatccacttccttccctagaagcggg
ccgcaactccagcagctgcctccaaatttctgtaacagacctgtctgtcctttagcatcc
acacagcctccatctcctgttagcccctttgtcgcacccataccaaacgctactaagaaa
cctcccatccctaacaccaccaattcctttcattacctacaggttcagtttttgagagga
cagtgcgctgaggcgccgcagttcaaattcagtcgcccagaacctggtcattcaactaat
tcctcattccaactgcaatctgcttacagcagacatccaaagccccactgtgctacaagt
tattacaaccaggtccctagttctgccggatgcttaaataaacaacaggtgcaaggtaca
taccaaagctccaacagtgaactgagcatacctgcggatgctctctgcaacagttttcag
accttgtccctataccaaaacaaacccaacagtgaagagagaagttttggcagacctcct
acttcatttgttcgaagtagaccaaggatcatcactctcactccagaaatccaggaccag
gtgcacagggctttaaaaccaattagaagtgtctcagcaaaattgttaggcaaaaaatta
catcttcccaaaaagatagtcaaccaagctctctactcactggagcgtttgcagaaagtc
tccaagcaaggactttcccccccaaagtggactttatacataaaccctatcgagggcgag
gaacatcaaaggtgtttttcagggaagcccaaacaacttgatgtcaagttagagataaaa
ggagtaatagaagaagagtgtgacacagaaacacagtttaggtgctcttcttctgagtca
tctgtctcagaagaatctcactcttcagggcaaagtctgcaacatcaacctttcacaatg
tcggatcaaaagcaactcgtcttacagcgcctcctggaattagcgccggtaactgctctt
gtgctagccaaaaacatgggcttgaggagttccaagcaggtcaattccaccttatatacc
ctggagaagaaaggtgaagttgtgagagttagtaaccgagacgtcaatccgcccacctgg
gagctctctgcccatcgcaaagagaggatgatgaggaccctaaaagctgcaaagagcagt
cagatggaagaacgtggtgttgaggagaagcctgccttactgcctgaaccaatgtcagag
ctggagccactgccgtttgacgaaagttggataccgaagactgaagtgctgtctcctacc
actgttgaacccccatctttaaactcaagtcaggaggaagtgactgttgaaggacagtgg
gcttgcgacgatatcccagaatatctgaatgcaattcgcaaacagacagattcagagaga
tcaattgccgataactgcaacccagttggaactgttgctgtgtctctggctgccccaccg
gcacagaacctttgggcaaaattgcaagaagttcgtctgaagaatcctgtgagcggccta
atggagtacgcccaatatttgggccagagttgtgagttcatactcctcgaccagtcggga
ccctcccatgaccccagattccgcatgcaggtgatgctcaatgggagactgtttccagtt
gccgaagcctccgcaaagaaggtcgcaaagaaagacgctgccgcagccaccttgctggtt
ctctttggcgagatgcagggaggtgtaagtagcgggaatgaaggaagtactgctggtata
aaccaaacaatggacattctttccaaatctggtggcaccattgagggctcagggggtgct
tttggagcaggtactgtagaagtgatggggatgcctgaaggacctcaccagccactgtcc
cgctcgctcccagggggaaagaatcctgtgtctgtcctgatggaatacagccagcgcagt
gggaatcccattgaatttatcatcactggccaagttggtccaccacatgatccaagattc
atgtacagagtgaaggtaggcgagaatctgtttgcagaggcctcagctccaagcaagaag
gcagcgcgccagctggcagctgaggaagctgtcaaagaattgatggccgacgggaggctg
cagctcaacaagccccagttgcccctcggctcctccagtgatagtgatagttgtgggact
tgcccttccctgccacctctcacagcagacgagttgcgagcagcccatgaggccggggtc
ggggatctcatcaaccacctgaacaacaacgccgtgtcagggcttctagagtatgccagg
gccagagggtttgctgctgagatccgcctggtgggccagtctggatcggcacacgagccc
aagttcacatatcaggccaaactgggtggccggtggttcccaccagtttgcgcgtctaac
aagaagcagggcaaacaggaggcggcagatgctgctctacgtgttctgattggagaggca
gagagggcagcccgcaccggggagctgatccctgctgagcttcctgtgagtggcagcacg
ctgcatgaccagattgccatgttaagccaccagcgtttcaatgccctgaccacgcgcatc
cagcacagcctgctgggacgcaagattctagccaccattgtcatgaggaggggagaaggc
ctgggaactgtcgtgagcctgggaacgggcaatcggtgcgttaaaggggaggagctgagc
cttaaaggggacactgtgaatgatggccatgctgaaattatatcaagaaggggatttgtc
agatttctgtacagtgagttgctgaagcactttgaaggtacagacaacagtatatttgag
gtgatggaggacaacaaactgcggatcaaaaccgacattacctttcacctctacattagc
acggctccgtgtggggatggtgctctttttgacaagtcgtgtagcgagacaggggaagaa
gtgggctgccaccagcctctgtttgagaatgccaagcagggcaagctgcgcaccaaggtg
gagaacggtgagggaaccatcccagttgagtccagcgccattgtgcccacatgggatggc
atccagcacggagagaggctgcgcacgatgagctgcagtgataagatcctgcgctggaac
gtactgggcctacagggggcgctgctcactcactttctgcatcccatctacctgaaatcc
atcacgcttggctatctgtacagccatggacacctgactcgggcagtctgctgtaggctg
gccagggatggcgaagccttcagccaaagtctccctccacccttccagctaaatcaccct
gaggttggccgggtcagcgtatacgactccacacgtcacacaggcaagacgaaggagtcc
agtgtgaactggagcctaccagaccatacaagtgtcgaggttttggatgggaccaaaggc
aaactagatgggaacaagctggccgtgtcccgagtttccaagtccaacctgttctgtctg
ttccgcacactgtgccagcgttgtggccgcaccgacctcctctcaatgcactcgtactct
caggccaagttggcgtccagctccttccagctcgcaaagcaccgtttctttcaagctctc
ggtgaccacggctacggcgcatggataggcaagccgttggaggagaagagcttcgaggcg
cgggaggagactgcaagcgtgaccgctgcgttcggcagctgtcggaacggaggagctatg
gaatacaacctggcagaggcatag
DBGET
integrated database retrieval system
