Shewanella carassii: TUM17387_06010
Help
Entry
TUM17387_06010 CDS
T07543
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
scaa
Shewanella carassii
Pathway
scaa01501
beta-Lactam resistance
scaa01503
Cationic antimicrobial peptide (CAMP) resistance
scaa02020
Two-component system
scaa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
TUM17387_06010 (tolC)
09132 Signal transduction
02020 Two-component system
TUM17387_06010 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
TUM17387_06010 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
TUM17387_06010 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_06010 (tolC)
02044 Secretion system [BR:
scaa02044
]
TUM17387_06010 (tolC)
01504 Antimicrobial resistance genes [BR:
scaa01504
]
TUM17387_06010 (tolC)
Transporters [BR:
scaa02000
]
Other transporters
Pores ion channels [TC:
1
]
TUM17387_06010 (tolC)
Secretion system [BR:
scaa02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
TUM17387_06010 (tolC)
RTX toxin transporter
TUM17387_06010 (tolC)
Multiple protein transporter
TUM17387_06010 (tolC)
RaxAB-RaxC type I secretion system protein
TUM17387_06010 (tolC)
Antimicrobial resistance genes [BR:
scaa01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
TUM17387_06010 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
TUM17387_06010 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DNA_repr_REX1B
Motif
Other DBs
NCBI-ProteinID:
BCV65242
LinkDB
All DBs
Position
complement(654690..656006)
Genome browser
AA seq
438 aa
AA seq
DB search
MKFKIRTLCAALTLAVSAPAVQADDLLQIYQQALTNDPVVLQAKAQRDQLYEKVEENRAP
LLPSISANVGYNKAWNDPSEDSSGLTGAIQLNQVIYNHAAWVGLSLAEKAASQADAVYAS
ALQTLITRVTTAYFDVLAAKDNYEFKGAEKRAIERQLEQTKQRFAVGLTAITDVHEAQAQ
YDLATAAEILAENELINSYEALREITGIDHKSIDILDTNRFSAASPTPAMPSDWLKMAET
NSVDLLTQRIGKDIAQETISLYKAGHMPSLSLSAGYTKGLEQEVGSQSQPDFDNGTVGVN
LSVPIFEGFKVSSQVKQAQYAYVEASQRLEQTYRQVVKNVRNNFNNVGASISSIKAYEQS
VLSSESALKATQAGFEVGTRTIVDVLNRTRDLYDSKRQLSNARYGYIKSILALKQATGTL
NEDDVISINNGLTTPAQQ
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgaaattcaagatccgcactttatgcgcggcgttaacgctcgcagtttctgccccggcc
gttcaagccgacgatttacttcagatatatcagcaggcattaaccaatgatcccgtagtg
ctccaagccaaggcacaaagagatcaactatatgaaaaagttgaagaaaaccgcgcccca
ctgctaccaagcatcagtgccaatgtcggttacaataaagcctggaacgatccttctgaa
gatagcagcggcctgacaggtgccatccaactcaaccaagtcatctataaccatgccgct
tgggtaggtttgagcctggcagagaaagccgcatcacaggccgatgccgtctacgcctca
gccctgcagacattgatcacccgggtaaccaccgcttactttgacgtgttggcggccaag
gacaactacgaattcaaaggtgccgagaagcgtgccatcgagcgtcagctggaacaaacc
aagcaacgctttgctgttggtctgacagccattaccgatgtccatgaagcacaggctcag
tatgacctggcgaccgctgccgaaattctggccgagaatgaactgatcaacagctatgaa
gccctgcgggaaatcaccggcatagatcacaagagcatcgatatcctggacaccaaccgc
ttctctgcagccagcccaaccccggcgatgccaagcgattggctaaagatggccgagacc
aacagtgtcgacttgctgacccagcgtatcggtaaagatatcgcccaggaaaccatcagc
ctctataaggccggccatatgccatctctgagcctgagtgccggttataccaaaggcctg
gagcaggaagtgggcagccagagccaacccgacttcgataacggtactgtaggcgttaac
ctgagcgtgcctatctttgaaggtttcaaggtcagctctcaggtgaaacaagcgcaatac
gcctatgttgaagctagccagagactggagcagacctaccgccaagtagtcaaaaatgtt
cgcaacaacttcaacaacgttggcgcttctatcagctccatcaaggcctatgagcagtca
gtgctctcttccgaaagtgcattgaaagccactcaagccggttttgaagtgggtacccgt
accatagttgacgtgctgaaccgtacccgggatctgtatgattccaagcgtcagctgtcc
aacgcccgttacggctatatcaagtcgatattggcactgaaacaggccacaggcaccctg
aatgaagatgatgtcatctccatcaacaacggcctgacaactcctgcacagcagtaa
DBGET
integrated database retrieval system
