Sphingomonas cannabina: LZK98_09060
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Entry
LZK98_09060 CDS
T08607
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
scab
Sphingomonas cannabina
Pathway
scab01501
beta-Lactam resistance
scab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LZK98_09060
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LZK98_09060
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scab02000
]
LZK98_09060
01504 Antimicrobial resistance genes [BR:
scab01504
]
LZK98_09060
Transporters [BR:
scab02000
]
Other transporters
Pores ion channels [TC:
1
]
LZK98_09060
Antimicrobial resistance genes [BR:
scab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LZK98_09060
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LZK98_09060
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LZK98_09060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UIJ47073
LinkDB
All DBs
Position
1875806..1877239
Genome browser
AA seq
477 aa
AA seq
DB search
MTRAIGIAALTALLLAGCASVPHDPPQVAKVEAGTLGLDSGTAAIDSEWWTAFGDPQLDR
LVGMGLSGSPTLESALARVRAAEAAVSVRRADELPQVTVDGQTQLQRFSENYIIPPPYGG
STRWVSTVQANLNWNLDLFGRQRAMVAQARASADAARLDAAAARLTIATSIAETYVGLAR
AERLIQVADGFVTTRQQALRYVQSRIRNQLASQFELRQAETLLAEAEQARTRAQAQRELL
VHALAALVGRGADFYPQITTPTLALDTPPTVPDVLPADLLGRRPDLLAGQARIDAAAAGR
QVARTDFLPNVSITALAGIAALGLGNAVDFGSRTYGAGPAIHLPIFEGGKLKAQYRGATA
DLDGAVASYNGAVVGAVREAADAVTQVRSADQDLADQRRVLTGLRETARLDQVRVSTGLG
SRLDAIESGFRLLEAEQALVGLQADALTRRIQLIAALGGGFDPNRPLAAAPASDKHS
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgcgatcggaattgcggcgctgacggcgctgctgctcgcgggatgcgcgagc
gtgccgcacgatccgccgcaggtggcgaaggtcgaggcgggcacgctcggcctcgacagc
ggcacggcggcgatcgattcggagtggtggaccgcgtttggcgatccgcagcttgaccgg
ctggtcgggatgggcctgtccggcagcccgacgctggagagcgcgctcgcccgcgtccgc
gcggccgaggcggcggtgtcggtgcggcgggcggacgagctgccgcaggtcaccgtcgac
ggccagacccagctccagcgcttttcggagaactacatcatcccgccgccctacggcggc
agcactcgttgggtttcgacggtccaggccaacctcaactggaacctcgatctgttcgga
cgccagcgcgcgatggtcgcccaggcccgcgccagcgccgatgccgcgcggctcgacgcg
gctgcggctcgccttacgatcgccacctcgatcgcggagacttatgtcgggctggcgcgg
gcggagcggctgatccaggtcgccgacggcttcgtgacgacgcgccagcaggcgctgcgc
tacgtccagtcgcgcatccggaaccagctcgccagccagttcgagctcaggcaggccgag
acgctgctcgccgaggccgagcaggcccgcacccgggcgcaggcgcagcgcgagctgctc
gtccacgcactcgcagcgctggtcggccggggagcggatttctacccccagatcaccacg
ccgacgctcgcgctcgatacgccgccgacggtgccggatgtcctccccgccgatctgctc
ggccgccggccggacctgctcgccggccaggcgcggatcgatgcagcggcggcggggcgg
caggtggcgcggaccgacttcctgcccaacgtcagcatcaccgcgctcgccggcatcgcg
gcgctcgggctcggcaatgcggtcgacttcggctcgcgcacctatggcgccgggccggcg
atccatctgccgatcttcgagggcggcaagctcaaggcgcaatatcgcggcgccactgcc
gatctcgacggcgcggtcgccagctacaacggtgcggtcgtcggggcggtgcgcgaggcg
gccgatgcggtgacgcaggtgcgctcggccgaccaggatctcgccgaccagcgtcgcgtc
ctgaccggcctgcgcgagacggcgcggctcgaccaggtgcgcgtctccaccggtctcggc
tcgcggctcgacgcgatcgaatcgggcttccgcctgctcgaggcggagcaggcgctggtc
gggctccaggccgacgcgctcacccgccgcatccagctgatcgccgccctgggcggcggc
ttcgatcccaaccggccgctcgccgcggcccctgcttcggacaagcactcatga
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