Sphingomonas cannabina: LZK98_09515
Help
Entry
LZK98_09515 CDS
T08607
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
scab
Sphingomonas cannabina
Pathway
scab01501
beta-Lactam resistance
scab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LZK98_09515
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LZK98_09515
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scab02000
]
LZK98_09515
01504 Antimicrobial resistance genes [BR:
scab01504
]
LZK98_09515
Transporters [BR:
scab02000
]
Other transporters
Pores ion channels [TC:
1
]
LZK98_09515
Antimicrobial resistance genes [BR:
scab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LZK98_09515
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LZK98_09515
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LZK98_09515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
YkyA
Motif
Other DBs
NCBI-ProteinID:
UIJ47153
LinkDB
All DBs
Position
complement(1975162..1976634)
Genome browser
AA seq
490 aa
AA seq
DB search
MIRPILPLASLMALAACSMAPEYERPAAPVPSSWPVGDAYLRQNEAGLPSVSYRDIFRDP
RLQALVEQALANNRDLRVAAANIAAARGAYRSQRSTLFPTVGTGASAGASKGGTNAQNAG
SSNDVRESYSANVGITAFEVDLFGRVRSQSRAALEDYFATEAAARATRLTLVGDIANAWL
TYAADKSLLALAEDTAKNAQESVRLTRLRLEGGIAPRTDLRQAEQTEAQARSDMAAQRTA
LAQDVNLLQLLVGAPIDPAQLPASIDEAAPTLAELPAGLDSGVLLRRPDVVQAEYQLRSA
NARIGAARAALFPRISLTGLLGFASTALGSLFDGDRFTWNASGGIDYNIFDAGGARGDLL
QARAQRDAAVATYEKAIQTAFREVSDALARRGTIADQETAQRSLVTAAQDNYDLSYARYR
GGIDTFLQSLDAQRSLYSAQRSYVGTRLDRATNLVDLYRTLGGDALLDATPEGPKPLSPE
PAATPTPRTR
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcccgatcctcccgctcgcatcgctgatggcgctggctgcctgctcgatggcg
ccggaatatgagcgcccggcggcaccggtgccgtcgtcctggccggtgggcgatgcctat
ctccgccagaacgaggcggggctgcccagcgtcagctatcgcgacatcttccgcgacccg
cgcctccaggcgctggttgagcaggcgctcgccaacaatcgcgacctgcgcgtcgccgcc
gccaacatcgccgcagcacgtggcgcctatcgctcacagcggagcacgctgtttccgacg
gtcggcaccggggcgagcgcgggcgcgagcaagggcggcaccaacgcccagaacgccggc
tcgagcaacgacgtacgcgaaagctattcggccaacgtcggcatcaccgccttcgaggtc
gacctgttcggccgcgtccgctcgcagagccgcgccgcgctggaggattatttcgcgacc
gaggcggcggcgcgcgcgacccggctcacgctggtcggcgacatcgccaacgcctggctc
acctatgccgccgacaagagcctgctcgcgctggcggaagatacggcgaagaacgcgcag
gaaagcgtccgcctgacacggctgcggctggagggcggtatcgcgccgcgcaccgacctc
cgccaggccgagcagaccgaggcccaggcccgctccgatatggcggcgcagcgcaccgcg
ctcgcgcaggacgtcaacctgctccagctcctcgtcggcgcgccgatcgacccggcgcag
ctccccgcctcgatcgacgaggcggcgccgacgctggcggaattgcccgccgggctcgat
tcgggcgtgctgctgcgccggccggacgtggtccaggccgaataccagctccgttccgcc
aatgcccgcatcggcgcggcgcgcgcggcgctgttcccgcgcatcagcctgacggggctg
ctcggcttcgccagcacggcgctgggatcgctgttcgacggcgaccgcttcacctggaac
gcctcgggcggcatcgactacaacatcttcgacgcgggcggcgcgcgcggcgacctgctc
caggcgcgcgcgcagcgcgatgcggcggtcgcgacctacgagaaggcgatccagaccgcc
ttccgcgaggtctccgacgcgctcgcccgccgcggcaccatcgcagatcaggaaacggcg
cagcgcagcctggtgacggcggcgcaggacaattacgacctgtcctatgctcgctaccgc
ggcggcatcgacaccttcctgcagagcctcgatgcgcagcgctcgctttattcggcacag
cgcagctacgtcggcacgcggctggatcgcgccaccaatctcgtcgacctctaccgcacg
ctgggcggcgacgcgttgctcgatgcgacgccggaaggcccgaagccgctgtcgccagaa
ccggccgccacgccgacgccgcggacccgctga
DBGET
integrated database retrieval system
