Sphingomonas cannabina: LZK98_09620
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Entry
LZK98_09620 CDS
T08607
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
scab
Sphingomonas cannabina
Pathway
scab01501
beta-Lactam resistance
scab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LZK98_09620
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LZK98_09620
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scab02000
]
LZK98_09620
01504 Antimicrobial resistance genes [BR:
scab01504
]
LZK98_09620
Transporters [BR:
scab02000
]
Other transporters
Pores ion channels [TC:
1
]
LZK98_09620
Antimicrobial resistance genes [BR:
scab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LZK98_09620
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LZK98_09620
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LZK98_09620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
UIJ47173
LinkDB
All DBs
Position
complement(2001834..2003243)
Genome browser
AA seq
469 aa
AA seq
DB search
MPRNRAALLLGGVLLLAGCATAPRYERPAVTTAAAYKELGPWQLAGSNVPTPGKWWELFG
DPTLNGLEERVEAGNPGLAAAAARYEQARALVRGAKADRFPQVDVGGDAGRSRVSAGRPL
SPGNAATYNDFEVGASLSYELDLFGRVRNSVRAREADAQASQADMAAVRLGLQAQLAATY
FDLRGLDARIVLLRETVAAFQRAFELTDTRHSGGIASGLDVSRAQSQLASAKAELDAVVA
QRARDEHAIATLIGESPSSFTLAVADAQPAPPAIPAGLPSTLLERRPDIAAAERRVAAAN
AEIGVARAALFPSVTLGAAGGFEATGGNLLSASNSFWALGPLSAALAIFDGGKRRANVRL
TRAQYDEAAANYRETVLTAFREVEDDLATARQLQSQERNQRDAVAAAERTRELALTRYRD
GASDYLEVVTAQTAALDAERALLQLRTEQLRVAVDTVRALGGGPAAPRP
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaaatagggcggcgttattgctgggcggtgtcctgttactcgccggttgcgcc
acggcgccgcgctacgagcgcccggccgtcactactgccgccgcctacaaggagctcggg
ccgtggcagctcgccggcagcaacgtgcccacgccggggaaatggtgggaactgttcggc
gatccgaccctcaacggcctggaggaacgggtcgaggccggcaacccgggccttgccgcc
gcagccgcccgctacgagcaggcgcgcgcgctcgtccgcggcgccaaggcggatcgtttc
ccccaggtcgatgtcggtggcgatgccgggcgcagccgcgtctcggccggccgcccactg
tcgccgggaaatgccgccacctacaacgacttcgaggtgggagcttcgctttcctatgag
ctcgacctgttcggccgcgtccgcaattcggtgcgggcgcgcgaggccgatgcgcaggcc
agtcaggcggacatggccgcggtccgcctcggcctgcaggcgcagctcgccgccacctat
ttcgacctgcgcgggctcgacgcgcgcatcgtgctgctgcgcgagacggtcgccgccttc
cagcgcgcgttcgagctgaccgacacgcgccattccggcggcatcgcctccggcctcgac
gtcagccgcgcccagagtcagctcgccagcgccaaggccgagctcgacgcggtcgtcgcc
cagcgcgcccgcgacgagcatgcgatcgccacgctgatcggcgagtcgccgtcgagcttc
acgctcgccgtcgccgacgcacagccggcgccgcccgccatccccgccggcctgccctcg
accctgctggagcgccgcccggacatcgccgccgccgagcgccgcgtcgccgccgccaac
gcggagatcggcgtcgcgcgcgcggcgctgttccccagcgtcacgctgggcgccgccggc
gggttcgaggcgaccggcggcaatctcctgagcgcttcgaacagcttctgggcactgggg
ccgctctcggccgcgctggcgatcttcgacggcggcaagcgccgcgcgaacgtccgcctg
acccgcgcccaatatgacgaggcggccgccaactaccgcgagacggtgctgaccgccttc
cgcgaggtcgaggacgacctcgccaccgcccgccagctgcagtcgcaggaacgcaaccag
cgcgacgcggtcgccgccgccgagcgcacccgcgaactcgcgctcacccgctaccgcgac
ggcgcctccgactatctcgaggtggtcaccgcccagaccgccgcgctcgacgccgagcgc
gcgctgctgcagcttcgcaccgaacagctgcgggtcgcggtcgataccgtccgggcgctc
ggcggcgggccggcagcacctcgtccatag
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