Scyliorhinus canicula (smaller spotted catshark): 119950934
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Entry
119950934 CDS
T11175
Name
(RefSeq) complement C1r-A subcomponent-like
KO
K01330
complement component 1, r subcomponent [EC:
3.4.21.41
]
Organism
scau Scyliorhinus canicula (smaller spotted catshark)
Brite
KEGG Orthology (KO) [BR:
scau00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
scau01002
]
119950934
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
scau04131
]
119950934
Enzymes [BR:
scau01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.41 complement subcomponent C_overbar_1r_
119950934
Peptidases and inhibitors [BR:
scau01002
]
Serine peptidases
Family S1: chymotrypsin family
119950934
Membrane trafficking [BR:
scau04131
]
Endocytosis
Phagocytosis
Opsonins
119950934
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Trypsin
CUB
Sushi
FXa_inhibition
EGF_CA
cEGF
Trypsin_2
EGF_3
CDCP1_CUB_6
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
119950934
NCBI-ProteinID:
XP_038629848
LinkDB
All DBs
Position
16:83849318..83921304
Genome browser
AA seq
705 aa
AA seq
DB search
MPLGVRLRLLLLLLMAEISVQGVIDNAMFGEIASPGYPDPYPNDTRNEWRLKVPEGYRVQ
LQFSYFDIEPSQRCIYDSLEVFSERKSLGKFCGNGNNVMGNYPGHQLLISKKNSMKLDFK
SDFSNEDRYLGFLAHYEAIDVDECSQQDEEDLLCDQLCHNTLGSYICSCHHGYQLQADGK
SCEAQCQEFFDHVSGHVSSLEYPRPYPPNLRCNYSLMVERGYSIHLEFQELFEIDAHDEV
PCPYDQLLVAYRNNLDGPLCGNVKPNPIDTQSNIVNILFNTDDSGDSRGWKLYYTTDRIR
CPDLNTLDHGTIQQQQDHYRFLDHVSFTCDVGYKIMEGDKELKSFGMLCTGDGVWNKEVI
PTCQIIDCGVPEKLENGRFRTLKETSMRNGYLSEIKYTCDKRYMMATPGSGQYTCSMTRD
WVNNAMGKVIPYCAPVCGKPDHSVTSGRGRIYGGALAPQGSFPWQVYLRSPRGGRAGGIL
VSDQWVMTAAHVIHPKDTDRPSEEEMKTFQVFMGNNSLNQFKNSGSVPVERVYVHEEYSG
DTHQYFNDLALIKLGRKVRLTQDVVPICLPPAHSPALYRNSLLGYVAGWGVTQDHRLLNE
LHYVGLPIADQDTCARTMKRAQVGSDKPELLLTPGMFCAGTGLGVTDSCQGDSGGAYAMH
QRGDDTWYATGIVSWGLDCGQNGTYGVYTRVSGYRDWIDRVMATG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgccactcggagttaggctgaggttactcctgctgctactgatggcagagatttcagta
cagggggtgatcgacaacgccatgtttggggaaatcgcctctcctggctaccctgacccc
tatcccaatgatacgcggaacgagtggaggctcaaggtgcctgagggttaccgggtccaa
ttgcaattcagctacttcgacatcgagccatcgcagaggtgtatctacgactcattggag
gtattttcggaaaggaaatctctgggaaagttctgtgggaatggaaacaatgtcatgggc
aattatcccggacaccagttgctaatttcaaagaaaaattccatgaaactggactttaaa
tcggatttttccaatgaggaccgctatctgggattcctagctcattacgaggcgattgat
gttgatgaatgctcgcagcaggatgaggaggatctcctttgcgatcagttgtgtcacaac
actctcggcagttacatctgctcctgtcaccatggataccaactgcaagctgatggaaaa
agttgtgaagcacaatgccaggagttctttgaccacgtgtcgggacatgtgtccagcctg
gagtaccccaggccctaccctccaaacctcaggtgtaactacagcctgatggtggaacga
gggtactccatccacctggagttccaggagctcttcgagatcgacgcgcacgatgaagtc
ccctgcccctacgaccaactgttggttgcttaccggaataatctggatggtccgctgtgc
gggaatgtgaaaccaaacccgatcgatacacagagtaacattgtgaacatcctcttcaac
accgatgactctggagatagccgcggctggaagctctattacaccacagacagaatacgg
tgcccagatctgaacacgttagaccacgggacgattcaacaacagcaggatcattaccgc
ttcctcgaccacgtgtcgttcacgtgtgacgtgggctacaagatcatggagggtgacaag
gaactgaaatcgttcggaatgctttgcacgggagatggcgtgtggaacaaggaagttatc
ccaacttgccaaatcattgattgtggggtcccggagaagctggagaatggaaggttccgg
acactgaaggagacctccatgaggaatggctacctttctgagatcaaatacacgtgcgac
aaacgatatatgatggcgacgccgggaagtggccagtacacttgctccatgacgagagat
tgggtgaataatgcaatgggtaaggtgatcccatactgtgctccagtttgcgggaaacca
gaccactccgtcaccagtgggaggggtcggatatacggaggggccctggcgcctcagggc
agcttcccctggcaggtctacctgaggagccctcgcggcgggcgcgcagggggtatcttg
gtcagcgaccagtgggtgatgaccgctgctcacgtcatccacccgaaggacacggacaga
ccttctgaggaggagatgaaaacgtttcaggtcttcatgggcaacaactccttaaaccaa
tttaaaaatagtggcagtgtgccagtggagagggtctatgtgcacgaagagtacagtgga
gacacccaccaatacttcaacgatctggcgctgattaaactgggcaggaaggtgaggctg
acccaggacgtggttcccatctgcttgccacctgcccactcgccagccctctatcgcaat
tcactactgggctatgtggcgggctggggagtaacgcaggatcaccgcctcttaaacgag
ctccattacgtggggctccccatcgccgaccaggacacctgtgcccggaccatgaaacgg
gcacaggtcggcagtgacaagccggagctgctgctgaccccgggcatgttctgcgcgggc
acaggactgggagtgaccgactcgtgtcagggggacagcgggggagcttatgccatgcac
cagcgtggcgatgacacttggtacgccacaggcatcgtctcctggggtctggactgtggg
cagaatggcacctacggagtctacaccagggtgtccgggtaccgggactggatagacagg
gtcatggcaactggctga
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