Siniperca chuatsi (mandarin fish): 122882168
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Entry
122882168 CDS
T08948
Symbol
adar
Name
(RefSeq) double-stranded RNA-specific adenosine deaminase
KO
K12968
double-stranded RNA-specific adenosine deaminase [EC:
3.5.4.37
]
Organism
schu
Siniperca chuatsi (mandarin fish)
Pathway
schu04622
RIG-I-like receptor signaling pathway
schu04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
schu00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122882168 (adar)
04623 Cytosolic DNA-sensing pathway
122882168 (adar)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
schu03041
]
122882168 (adar)
Enzymes [BR:
schu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.37 double-stranded RNA adenine deaminase
122882168 (adar)
Spliceosome [BR:
schu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
122882168 (adar)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
z-alpha
Motif
Other DBs
NCBI-GeneID:
122882168
NCBI-ProteinID:
XP_044065202
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All DBs
Position
LG9:complement(13268288..13284541)
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AA seq
1386 aa
AA seq
DB search
MSRGRGGPSKEHYHRHPPPDLQAKENYHRPGPTSFYPRPGPQQIPYSSYYNSPGRPVGPI
QPPAPSFNPSAPPILNHNKAAPNPVAHNSSHNQNHGPIPGPNSFKYQQVEFLRGQSSEAP
QFRTSPRGGGGGVVPGRPPSSSYQPQSGYSRYPNLNSSPRGRGRYSQDHCFVYPPSIRAP
RGTPGPRHQNQNQFEGINHNQYSNRQWCDQTDSLNDSFQNLSLYRDRPNRGGERFDRHSA
SSSSANSSFSGGNISLTPDIQGYVHRSLAALKPSESISAKLLAKKLRLPKKIVNQALYSL
ERSQKASKQGLLPPEWTLYREPVRGLEDRNVQSPPSHRCVSSEHPPKPAAKVELKTETVE
NRGQAKEEDSDTESSSSNCSSLESSDSEESQSPAKGQHQEKQHPSTTSSPDQEFKLPVMA
EQKELVLQYLLHSREATALVIAKNLGLRNAKQVNPTLYSLEKQGEVIKNGEVNPPTWELS
THRRERMERSLKAAQSTPAERGKTQVEPSRDEMGGGSVFLPSSTLPPIPGLEPLPLPEGW
MPEQSHSEASQSSLQPPSITPCQDEEINEGQWATDDIPEFLNAIRKETDAGKLAAEKANA
VGTVAVSLAAPPPQNLWAKLQEVRLKNPVSGLMEYAQYLGQNCEFLLLDQSGPSHDPRFR
MQVMLNGRLFPLAEASSKKVAKKDAAAATLRILIGEMQGGASTGDEGNTASMDQVMDVLP
DTSGPAEGTGGICGTSSVEGMGMTEGPRQPLSRSLPGGKNPVSVLMEYSQRSGNPIEFII
TGQAGPPHDPRFMYRVKVGENLFPEASAPSKKAARQLAAEEAVKELMADGRLQLNKPQLP
LGSSSDSDGSGSGTTCPSLPPLTADELRAAHEAGVGDLINHLNNNAVSGLLEYARARGFA
AEIRLVGQSGPPHEPKFTYQAKLGGRWFPPVCASNKKQGKQEAADAALRVLIGEAERAAR
TGELIPAELPVSGSTLHDQIAMLSHQRFNALTTRIQHSLLGRKILATIVMRRGEGLGTVV
SLGTGNRCVKGEELSLKGETVNDCHAEIISRRGFVRFLYSELLKHYDDTDDSIFEPAEKN
KLRIKPDITFHLYISTAPCGDGALFDKSCSESGDEVEGHQPLFENAKQGKLRTKVENGEG
TIPVESSAIVPTWDGIQHGERLRTMSCSDKILRWNVLGLQGALLTHFLHPIYLKSITLGY
LYSHGHLTRAVCCRLARDSDAFTQSLPPPFMLNHPEVGRVSVYDSTRHTGKTKESSVNWS
FPDQHSVEVLDGTKGKLDGNKLGVSRVSKSNLFGLFHSLCQRCGRTDLLSLPSYSHAKMS
AMSFQLAKQQFFRALGVHGYGAWIGKPLEEKTFEAGEGTRSNGASVPVAYGSSRNGGAME
YKQEEA
NT seq
4161 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggtagaggagggccttccaaagaacactaccacaggcatccaccaccagac
ctccaggccaaggagaattaccacagacctggcccaacttcattctaccctagacctggc
ccacagcagatcccatattcaagttactacaacagccctggccgtcccgtaggtcccata
cagcccccagctccttctttcaacccctccgctccacccatactaaaccacaataaagcg
gcccctaatccagtggcccataacagctcacataatcagaatcacggtcccattcctggt
cccaattcctttaagtaccaacaggtggagttcctgagagggcagagctctgaggcgcca
cagttcagaaccagtccacgtggagggggagggggagtggtacctggtaggcctcctagt
tcctcataccagccccagtcaggctacagtagatatccaaacctcaacagcagccctagg
ggaagagggcggtatagtcaggatcattgttttgtatacccacccagtataagagccccg
cgaggaactccaggccctcgacaccagaatcaaaaccagtttgaaggtataaaccacaac
caatactccaacagacaatggtgcgaccaaacagactctctgaatgacagttttcagaat
ttgtccctttatagagacaggcccaacagaggaggagagagatttgacagacattctgca
tccagcagctctgcaaattcaagcttttctggaggtaacatctctctcactcctgacatc
cagggctatgttcacaggtctttggctgctttaaagccaagtgagagtatctctgcaaaa
ttgttagccaaaaagctgcgtctgcccaaaaagatagtcaaccaggctctctactcttta
gagcgctcacagaaagcttccaagcaaggactcctccctcctgagtggactctttacaga
gaacctgtcagaggcttagaagatcgaaacgtacaaagtccaccttcccatcggtgtgtc
agctcagaacaccctccaaaacctgcggccaaggttgagctaaaaacagaaacagtagaa
aacaggggacaagccaaagaagaggactctgacacagaatccagttcttctaactgctcc
tctttagagtcatctgattctgaagagtcccagtcaccagcaaaaggtcagcaccaggag
aaacaacatcccagcactaccagctctcctgatcaggaattcaagcttcccgtaatggca
gagcagaaggagctagttctgcagtacctcctgcattcaagggaggcaactgctctcgtc
atagccaaaaatcttggtcttaggaatgccaagcaggtcaatcctaccctctactccctg
gagaagcaaggtgaagtcattaagaatggagaagtcaaccctcccacctgggagctctcc
acccaccgcagagagaggatggagaggagccttaaagccgcacagagcaccccagctgag
aggggtaagacacaggtagaacccagtagagatgagatgggaggagggtccgtatttctg
ccgtcgtcaacgctaccaccaataccaggcctcgagccactgccacttccagagggttgg
atgcccgagcaaagtcatagtgaagcgtcccaatcctcgctccagcccccctccattacc
ccatgtcaagacgaagagatcaacgaaggacagtgggccactgacgacatcccagaattc
ctaaacgccattcgcaaagagacagatgctgggaaactagcagcagagaaggccaacgcc
gtgggaactgtagctgtgtcgctggctgctccacctccccagaacctgtgggccaaacta
caggaggtgaggctgaagaaccctgtcagcggcctcatggagtatgcccagtatctgggc
cagaactgtgagttcctgctcctcgaccagtcgggaccctctcatgaccccagattccgt
atgcaggtgatgctcaacgggaggctgtttcctctcgcggaagcttccagtaagaaggtt
gcaaaaaaagacgctgctgcggccaccctgcgcattctcattggagagatgcagggaggg
gcgagcacaggggacgagggaaatactgccagtatggaccaagtgatggatgtactccca
gacaccagtgggccagctgaaggcacggggggaatttgtgggaccagtagtgtagaaggg
atggggatgacggagggacctcgccagccactgtcccgctctctgcctggtgggaagaat
ccggtgtctgtcctgatggagtacagccagcgcagcgggaaccccatcgaattcatcatc
actgggcaggcaggcccaccacatgacccaaggtttatgtacagggtgaaggtcggagag
aacttgtttccagaagcctcagctccaagcaagaaggcagcccgccagctggcagcagag
gaggccgtgaaagaattaatggctgacgggagactgcagctcaacaagcctcagttgccc
ctgggttcttccagtgatagtgatggcagtggttctgggactacatgtccctctttgccc
cctctgactgcagatgagttgcgagcagcacatgaggcaggggttggggacctcatcaac
cacctgaacaacaacgctgtgtcaggtcttctggagtatgctagagcccggggctttgct
gctgagattcgactagtgggccaatctgggccgccacatgagcctaagttcacctaccag
gccaaactgggcggacgctggttccctccagtgtgcgcgtccaacaagaagcagggaaaa
caggaagcagcagatgctgctctacgagttctgattggagaggctgagagggcagcccgc
actggggagcttatcccagctgagcttccagtgagtggcagcactttgcatgaccagata
gcaatgttgagtcaccagcgtttcaacgccctgaccacacgtatccagcacagccttctg
ggacgcaagattctggccaccatcgtcatgaggaggggggagggcctggggactgttgtc
agcctgggaactggaaatcgctgtgttaaaggggaggagctgagccttaaaggggagaca
gttaatgattgccacgctgaaatcatctccagaaggggatttgttcggtttctgtacagt
gagctgctcaagcactatgatgacacagatgatagtatatttgagccagcggagaaaaac
aaactgcgaatcaaacctgacatcacctttcacctctatatcagcacggcaccttgtggg
gatggcgctctgtttgacaagtcatgcagtgagtcaggggatgaagttgagggtcatcag
cctctgtttgagaatgctaagcagggcaagctccgcaccaaagtggagaatggcgagggc
accatcccagtggagtcaagtgctattgtgcccacctgggacggcatccagcacggtgag
aggctgcgaaccatgagttgcagtgataagatcctgcgctggaacgtgttgggtctgcag
ggggcgctcctcacgcatttcctgcatcccatctacctgaagtccatcacgcttggctat
ctgtacagccacgggcacctgacacgtgctgtttgctgtcggctggcaagagacagtgac
gcgttcacccaaagtctccctcctcccttcatgctaaaccacccagaggtgggcagggtg
agtgtgtacgactccacacgtcacacaggcaagaccaaggagtccagtgtgaactggagc
tttccagaccagcacagtgtagaggtgctggacgggaccaaaggcaaactggatgggaac
aagctaggtgtgtccagagtgtccaagtccaacctattcggcctgttccactctttgtgc
cagcggtgcggccgcactgacctcctctccctgccctcctactcccacgccaagatgtca
gcaatgtccttccagctagccaagcagcagttcttccgagctctcggcgtccacggttac
ggcgcctggatcggcaagcctctggaagagaagacctttgaggcaggggagggaaccagg
agcaatggagcaagtgtccctgtggcatacggcagcagtagaaacggaggagcaatggag
tacaagcaagaggaggcatag
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integrated database retrieval system
