Salicibibacter cibarius: HUG15_14950
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Entry
HUG15_14950 CDS
T07370
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
scia
Salicibibacter cibarius
Pathway
scia00300
Lysine biosynthesis
scia00550
Peptidoglycan biosynthesis
scia01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scia00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
HUG15_14950
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HUG15_14950
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scia01011
]
HUG15_14950
Enzymes [BR:
scia01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
HUG15_14950
Peptidoglycan biosynthesis and degradation proteins [BR:
scia01011
]
Precursor biosynthesis
Amino acid ligase
HUG15_14950
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
VID27
Motif
Other DBs
NCBI-ProteinID:
QQK76734
UniProt:
A0A7T6Z4F0
LinkDB
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Position
complement(2950948..2952420)
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AA seq
490 aa
AA seq
DB search
MDLQECLAGLLAYTKTKAENPIITSVEMDSRFAQAGTLFVAIRGFTVDGHRYAREAVKKG
AVAVVAEEDVDVDVPTVIVSDSKRALAQIANRFYDSPTHDLNIIGVTGTNGKTTTTHLLN
QILQDDKRKSGLIGTLYTQYNDEVFEAKNTTPESLVLQRTFSEMKEKGVTDVTMEVSSHA
LSLGRVRGTTFNIAVFTNLSVDHLDYHETMDDYKQAKGLLFSQLGNAYDQDLKVAIVNND
DPYARYMMDVTAAPVLTYGLRDGVDVRARDLHARPTGTFFTLVIGDESIELNLKMIGRFS
VYNALAAAAAAYASGVSLPVIKQSLETAKPVPGRFEPIEEGQDFAVIVDYAHTPDSLDNI
LETVRELTEQDVYVIVGCGGDRDRTKRPEMARIAAAYADEAIFTTDNPRSEDPRTILRDM
EAGAEGQPFRTIVDRKEAIRYTVDKAKKKDVIVIAGKGHEPYQEVDGTFHTFDDRIEAKE
AIIARREREK
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atggatttgcaggaatgcttggcgggcttgctcgcatataccaaaacgaaagctgaaaac
ccgataattacttccgtagagatggattctcgctttgcacaagcaggcacattatttgta
gccattcgcggatttacggtcgatggccaccggtatgcgcgagaagctgttaaaaagggg
gccgtcgcggttgttgccgaggaagatgtggacgtcgatgttccaaccgttattgtatcc
gacagcaaacgggccctcgcgcaaatcgccaaccgtttttacgatagtcctacccatgac
ctaaacatcataggtgtcaccggaacgaacgggaaaacgacaaccacgcatctattgaat
caaattttacaagatgacaagcggaaatcaggcttgatcggcaccctttatacccaatat
aatgacgaagtcttcgaagccaaaaatacgaccccggaatcattggtgttgcaacgaacc
ttttcggaaatgaaggaaaagggcgtaaccgatgtgacgatggaagtctcttcgcacgca
ttatccctcggcagagtgcgcggaacgacgtttaatatcgctgtgttcaccaatttgagt
gttgatcatctggattatcatgaaacgatggacgattataagcaggccaagggactcttg
ttttcacaacttggcaacgcttatgatcaggatttgaaagtggcgattgtcaataatgac
gatccttacgcccgctacatgatggatgtaaccgcagcgccggttctcacgtacggcttg
cgggacggggtcgatgttcgtgcccgtgatttgcatgcgcgtccgacgggaacatttttt
acactcgtaataggcgatgaatcgattgaattaaacttaaaaatgatcgggcgtttcagc
gtatataatgccttggctgccgcggcggcagcgtatgcgtccggggtttccttgcccgtg
attaagcaaagcctagaaactgccaaaccggttccgggtcggtttgagccgattgaagaa
gggcaggatttcgcggtaatcgtcgattacgcccatacgcctgacagtttggataacata
ttggaaacggtccgagagcttacagaacaagacgtctacgtaatcgtcggttgcggcggg
gaccgggaccgtacgaagcgcccggaaatggcaaggatcgctgccgcctatgcggatgaa
gcgattttcacgacggataatccacgcagtgaagacccacgcaccattcttcgggatatg
gaagcaggggcggaaggccaacctttccggacgatcgtggatcgtaaagaagccattcgt
tacaccgttgataaagcaaaaaagaaagatgtcatcgttattgccggcaaagggcatgag
ccttatcaggaggttgacggaacctttcacacgttcgatgatcgcattgaggcaaaagag
gcgatcatcgctcggcgggaacgtgaaaaatag
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