Salicibibacter cibi: HUG20_01185
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Entry
HUG20_01185 CDS
T07369
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
scib
Salicibibacter cibi
Pathway
scib01501
beta-Lactam resistance
scib01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
scib00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HUG20_01185
01503 Cationic antimicrobial peptide (CAMP) resistance
HUG20_01185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scib02000
]
HUG20_01185
01504 Antimicrobial resistance genes [BR:
scib01504
]
HUG20_01185
Transporters [BR:
scib02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
HUG20_01185
Antimicrobial resistance genes [BR:
scib01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HUG20_01185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF_C
MMPL
FhaA_N
Motif
Other DBs
NCBI-ProteinID:
QQK78653
UniProt:
A0A7T6Z869
LinkDB
All DBs
Position
227502..230780
Genome browser
AA seq
1092 aa
AA seq
DB search
MKISNFSIKRPKFTIVIMLLFLIVGAVSLTRLPLQLFPDVEAPVAAVATSYEGAGPEEVL
NDVTEELEGELAATSGLQDMTSQSAEGSSIIILEFSQDTSIDDVETDIVSTITQAELPDD
AGQPSFIEFDPSMLPSMQLAVSANGDEVSDFQDDALDMQQELSRVDGVADVDEAGSITEL
YEVELNQDDLNDANMQQSDVVDMIQGNDIAVPGGIVEDEDRNITTRVLSELTDQEDLEEL
VISQDPETGDDITLDDVASISFSTEDEDAITRANQEAAMQFSVMQESDANATQLEQEFND
ELAALLQEDAYEDLSVVTLYSEGEFIQEAVDNVVVMLVTGGILAMLVLFAFLRNLKTPFI
IGLSMPFSIIVTFALFFFTDISLNMLTLGGLALGIGMLVDNSIVVIENIYRHLSMRKSPK
QAAYEGTREVGTAITASTLTTIAVFLPVVFITGMVGDLFAPLAIAVSFSLLASLGVALTV
VPMIASRVLSMPSENTEEERQRTSRLVNFVEKGTKWALRRRFVVVTITLILFAIGILGLT
TAGMEFMPDADEGSFMVEVEHDFGTQLEQTEETVAEIEEEIDDHPEIDNYLSTIGSSAMD
EGLSEESHIAEVMINLVPVNDRNMDTMEFSEMVESDLDNIDTDAEIDVSVMSQAAMGDPN
TFVFSVNDPDRERLEETADDLVDELEDESGINQVDTSLEETAPELQVLIDEDDAREEGLV
PAQIAESVNEQTTGVTATTIQSNGNDLYEVNVRAEDELTESVENFESLTIQNEDGDNISL
SDVADIEEDEEPATIERADMIPSVEFDVVYGSGYNLGDITPLVEDVVADYELDDEAEYVV
GGDQEMLDDAIGSMVLAFVLGIIFIYLVMVAQFESFKYPFVIMFTVPFFVIGVMLALTVT
QTPVSIVAMIGILVLTGIVINNAIVLVDYANQKKAQGMRAYDAIVTAVQDRVRPILITAI
TTILGVVPLSLGIGEGAEIQQPMAIVVIGGLISSTFLTLFVIPVIYSFVDPDIRSMNKKY
MTPEGDVVYARDLPPKGDGNEIEETGEDGKEQGEDVTESSKEQSSDEREKDLSNDDVMDA
LEEILRRRKRDK
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatatccaatttttctatcaagagaccaaaatttacgattgtcattatgctctta
tttttaattgtgggcgctgtttccttgacacggctgccgcttcagctttttccggatgta
gaggctccggtggccgcagtagctacaagttatgaaggggcgggcccggaagaggtcctt
aatgatgtgaccgaagagctggaaggggagctggcggcaacgtccggtttgcaggatatg
acgtcccaatcggctgaagggtcttccatcattattctggaatttagccaggacacatcg
attgatgatgttgaaacggatattgtctcgacgattacacaggcggagcttccggatgat
gccgggcaaccgtcgttcatagaatttgacccttccatgctcccgagcatgcagctcgcc
gtctcggcaaacggggatgaggtcagtgacttccaagatgatgctttagacatgcaacaa
gagttatctcgagtagatggtgttgcggacgtagatgaagccggatccatcactgaactc
tatgaagtagagctcaatcaagatgatttaaatgacgccaatatgcagcaaagtgatgtt
gttgacatgatccagggaaatgacattgccgttcccggtggcattgttgaggatgaagat
cgtaatatcactacgcgtgtattaagtgagctgacggatcaggaagatctggaagagctc
gtgatttcccaggacccggaaaccggagacgacatcacgcttgatgacgttgccagcatt
tctttctcaacggaagatgaggatgccattacccgggcgaaccaggaagccgccatgcag
ttcagtgtcatgcaagagtctgatgcgaatgcgactcaattagagcaagaattcaacgat
gaactggcggcgttgctgcaagaggacgcttatgaagatttatcggtcgttacgctttac
agtgaaggggaatttattcaagaggccgtggacaatgtcgttgtcatgttagtgactggc
ggtatccttgcgatgttggttctttttgccttcttacgtaatttaaaaacaccatttatt
atagggctctccatgccattttccattattgtcacctttgccctctttttctttaccgat
atcagtttgaatatgttgacgctcggggggcttgcgctcggtatcggaatgttggtcgat
aattccattgttgtgatcgaaaacatatatcggcacctatcaatgcgaaaatcgccgaaa
caagcagcttatgaaggaacaagagaagtaggaacagccatcacagcttcaacgctgacg
acgatcgctgtcttcctccccgttgtgtttataacgggaatggtcggagacttatttgca
cctttggctatagctgtttcgtttagcctattggcttcattgggtgttgcgcttaccgtc
gtaccgatgattgccagtcgagtattaagcatgccatcggaaaacacagaagaagagcga
caaagaacatcccgtctcgtcaactttgtggagaaggggacgaaatgggcgcttagacga
cgattcgttgtcgttacgatcacattgattctgtttgccattggaatattggggcttaca
accgccgggatggaatttatgcctgatgccgatgaaggctcatttatggttgaagttgaa
catgactttgggacacaactggaacaaacggaagaaactgttgccgaaatcgaagaagaa
attgacgatcatcccgagattgataattacttgagcacgatcggatccagtgccatggat
gaaggcttaagtgaagaaagccatattgccgaggtcatgattaatttggtgccggtgaac
gatcgaaatatggatacaatggaattctcggaaatggttgaaagtgatcttgataatatt
gatacagatgccgaaatagacgttagtgtgatgtctcaggcagcgatgggagatccaaat
acttttgtcttctcagtcaacgatcctgatcgtgaacgcctggaggaaacagcagatgac
ttggtagatgaattggaagatgaatccgggattaatcaggtagataccagtttggaagag
acagccccggaactgcaggtgctcattgatgaagatgatgccagagaagaaggccttgtt
ccggctcaaattgccgagagcgtcaatgagcaaaccacgggcgtaacagcaacgaccatc
caatcgaatgggaacgacctgtacgaagtcaatgttcgagccgaggacgaactaacggaa
agcgtggagaattttgaatcgctcacgattcaaaatgaagatggcgacaacatctcctta
tcagatgtggctgatattgaagaagatgaagagcctgcgaccatcgaacgtgccgatatg
attccttcggttgaatttgatgttgtctatggaagtggatataatctaggggatataacc
ccgcttgtcgaggacgttgtggcagattatgagctggatgacgaagccgagtacgttgtt
ggcggagatcaggaaatgctggatgatgcgataggcagcatggtacttgcctttgtactc
gggatcatctttatataccttgtcatggtggcccaattcgagtcctttaagtacccattt
gtgatcatgtttacggttccgttctttgtcattggcgttatgctggcattgacggttaca
caaacccccgtcagcatcgtcgccatgatagggattcttgtccttaccggaattgtcatt
aacaatgccatcgtgctcgtcgattatgccaatcagaaaaaagcgcagggcatgagggca
tatgatgcaatagtgacggccgttcaagatcgggtccgtccgatattaatcacggccatt
acgacgattttaggggttgtaccgctttctctcggtatcggtgaaggtgcggaaattcaa
caacccatggcgattgttgtgatcggcggtttaatcagcagtaccttcttaacgctcttt
gtcatcccggttatctacagctttgtggatcctgatattcgaagcatgaacaagaagtat
atgacacctgaaggagacgttgtctacgcaagagatttacctccaaagggggatgggaac
gagatagaagaaacaggcgaagacggaaaagaacaaggagaagacgttaccgaatcatcg
aaagaacaatccagcgatgaacgagaaaaagatctatccaatgatgatgttatggatgca
ttagaggaaattcttcgccgcagaaaacgagataaataa
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