KEGG   PATHWAY: scir02010
Entry
scir02010                   Pathway                                
Name
ABC transporters - Streptomyces cinnabarinus
Description
The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).
Class
Environmental Information Processing; Membrane transport
Pathway map
scir02010  ABC transporters
scir02010

Other DBs
GO: 0043190 0043191 0043192
TC: 3.A.1
Organism
Streptomyces cinnabarinus [GN:scir]
Gene
STRCI_000201  [KO:K10227]
STRCI_000202  [KO:K10228]
STRCI_000203  [KO:K10229]
STRCI_000278  [KO:K10240]
STRCI_000279  [KO:K10241]
STRCI_000280  [KO:K10242]
STRCI_000335  [KO:K23187]
STRCI_000336  [KO:K23186]
STRCI_000338  [KO:K25286]
STRCI_000450  [KO:K15553]
STRCI_000451  [KO:K15555] [EC:7.6.2.14]
STRCI_000452  [KO:K15554]
STRCI_000801  [KO:K10117]
STRCI_000802  [KO:K10118]
STRCI_000803  [KO:K10119]
STRCI_000932  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
STRCI_000933  modB; molybdate ABC transporter permease subunit [KO:K02018]
STRCI_000934  [KO:K02017] [EC:7.3.2.5]
STRCI_000964  [KO:K25286]
STRCI_000967  [KO:K23186]
STRCI_000968  [KO:K23187]
STRCI_000969  [KO:K23188]
STRCI_000973  [KO:K23228]
STRCI_000974  [KO:K23227]
STRCI_000975  [KO:K10829] [EC:7.2.2.16]
STRCI_000994  [KO:K15555] [EC:7.6.2.14]
STRCI_001394  [KO:K10119]
STRCI_001395  [KO:K10118]
STRCI_001396  [KO:K10117]
STRCI_001619  [KO:K02073]
STRCI_001620  [KO:K02072]
STRCI_001621  [KO:K02071]
STRCI_001691  [KO:K02001 K02002]
STRCI_001692  [KO:K02000] [EC:7.6.2.9]
STRCI_001790  [KO:K10112] [EC:7.5.2.-]
STRCI_001852  [KO:K01996]
STRCI_001899  [KO:K23188]
STRCI_001900  [KO:K23187]
STRCI_001901  [KO:K23186]
STRCI_002040  [KO:K10227]
STRCI_002041  [KO:K10228]
STRCI_002042  [KO:K10229]
STRCI_002093  [KO:K10234]
STRCI_002094  [KO:K10233]
STRCI_002095  [KO:K10232]
STRCI_002097  [KO:K10236]
STRCI_002190  [KO:K01999]
STRCI_002191  [KO:K01997]
STRCI_002192  [KO:K01998]
STRCI_002193  [KO:K01995]
STRCI_002194  [KO:K01996]
STRCI_002453  [KO:K15772]
STRCI_002454  [KO:K15771]
STRCI_002455  [KO:K15770]
STRCI_002478  [KO:K18232]
STRCI_002479  [KO:K18233]
STRCI_002516  pstB; phosphate ABC transporter ATP-binding protein PstB [KO:K02036] [EC:7.3.2.1]
STRCI_002517  pstA; phosphate ABC transporter permease PstA [KO:K02038]
STRCI_002518  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
STRCI_002519  [KO:K02040]
STRCI_002563  [KO:K16785]
STRCI_002655  chvE; sugar ABC transporter substrate-binding protein [KO:K10546]
STRCI_002656  gguA; sugar ABC transporter ATP-binding protein [KO:K10548] [EC:7.5.2.-]
STRCI_002657  gguB; sugar ABC transporter permease [KO:K10547]
STRCI_002687  [KO:K15553]
STRCI_002688  [KO:K15555] [EC:7.6.2.14]
STRCI_002689  [KO:K15554]
STRCI_002727  [KO:K18887]
STRCI_002728  [KO:K18888]
STRCI_002775  [KO:K09815]
STRCI_002776  [KO:K09817] [EC:7.2.2.20]
STRCI_002777  [KO:K09816]
STRCI_002921  [KO:K03523]
STRCI_002929  [KO:K10112] [EC:7.5.2.-]
STRCI_002931  [KO:K10112] [EC:7.5.2.-]
STRCI_003028  [KO:K15580]
STRCI_003089  [KO:K10441] [EC:7.5.2.7]
STRCI_003090  [KO:K10439 K10440]
STRCI_003092  rbsD; D-ribose pyranase [KO:K06726] [EC:5.4.99.62]
STRCI_003144  [KO:K25287]
STRCI_003163  [KO:K10240]
STRCI_003164  [KO:K10241]
STRCI_003165  [KO:K10242]
STRCI_003209  [KO:K11081]
STRCI_003210  [KO:K11082]
STRCI_003211  [KO:K11083]
STRCI_003212  [KO:K11084]
STRCI_003278  [KO:K05846]
STRCI_003279  [KO:K05847] [EC:7.6.2.9]
STRCI_003280  [KO:K05846]
STRCI_003281  [KO:K05845]
STRCI_003295  [KO:K17331]
STRCI_003296  [KO:K17330]
STRCI_003297  [KO:K17329]
STRCI_003327  ftsX; permease-like cell division protein FtsX [KO:K09811]
STRCI_003328  ftsE; cell division ATP-binding protein FtsE [KO:K09812]
STRCI_003335  [KO:K10232]
STRCI_003346  [KO:K09692]
STRCI_003347  [KO:K09693] [EC:7.5.2.4]
STRCI_003526  [KO:K02007]
STRCI_003527  cbiQ; cobalt ECF transporter T component CbiQ [KO:K02008]
STRCI_003528  [KO:K02006]
STRCI_003683  [KO:K01999]
STRCI_003801  ugpC; sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC [KO:K10112] [EC:7.5.2.-]
STRCI_003886  pstS; phosphate ABC transporter substrate-binding protein PstS [KO:K02040]
STRCI_003887  pstC; phosphate ABC transporter permease subunit PstC [KO:K02037]
STRCI_003888  pstA; phosphate ABC transporter permease PstA [KO:K02038]
STRCI_003889  pstB; phosphate ABC transporter ATP-binding protein PstB [KO:K02036] [EC:7.3.2.1]
STRCI_004099  cydD; thiol reductant ABC exporter subunit CydD [KO:K16014]
STRCI_004368  [KO:K10543]
STRCI_004416  [KO:K02040]
STRCI_004888  [KO:K18232]
STRCI_004889  [KO:K18233]
STRCI_004989  [KO:K02000] [EC:7.6.2.9]
STRCI_004990  [KO:K02001]
STRCI_004991  [KO:K02002]
STRCI_005060  [KO:K07335]
STRCI_005061  [KO:K07335]
STRCI_005062  [KO:K23537]
STRCI_005063  [KO:K23535]
STRCI_005064  [KO:K23536]
STRCI_005302  [KO:K15580]
STRCI_005303  [KO:K15581]
STRCI_005304  [KO:K15582]
STRCI_005305  [KO:K15583]
STRCI_005306  [KO:K10823]
STRCI_005426  [KO:K17329]
STRCI_005427  [KO:K17330]
STRCI_005428  [KO:K17331]
STRCI_005851  [KO:K02064]
STRCI_005852  [KO:K02063]
STRCI_005853  [KO:K02062] [EC:7.6.2.15]
STRCI_005862  [KO:K11069]
STRCI_005870  [KO:K11069]
STRCI_005871  [KO:K11072] [EC:7.6.2.11]
STRCI_005872  [KO:K11071]
STRCI_005873  [KO:K11070]
STRCI_005883  [KO:K17318]
STRCI_005884  [KO:K17319]
STRCI_005885  [KO:K17320]
STRCI_005959  [KO:K10439]
STRCI_005963  [KO:K10007]
STRCI_005964  [KO:K10006]
STRCI_005965  [KO:K10005]
STRCI_005966  [KO:K10008] [EC:7.4.2.1]
STRCI_006174  ngcE; N-acetylglucosamine/diacetylchitobiose ABC transporter substrate-binding protein [KO:K10200]
STRCI_006175  [KO:K10201]
STRCI_006176  [KO:K10202]
STRCI_006178  [KO:K10543]
STRCI_006179  [KO:K10545] [EC:7.5.2.10]
STRCI_006180  [KO:K10544]
STRCI_006190  [KO:K10117]
STRCI_006191  [KO:K10118]
STRCI_006192  [KO:K10119]
STRCI_006290  [KO:K05847] [EC:7.6.2.9]
STRCI_006291  [KO:K05846]
STRCI_006292  [KO:K05846]
STRCI_006297  [KO:K05845]
STRCI_006353  [KO:K15554]
STRCI_006354  [KO:K15555] [EC:7.6.2.14]
STRCI_006355  [KO:K15553]
STRCI_006555  [KO:K10008] [EC:7.4.2.1]
STRCI_006687  [KO:K10441] [EC:7.5.2.7]
STRCI_006688  [KO:K10440]
STRCI_006689  [KO:K10439]
STRCI_006848  [KO:K10441] [EC:7.5.2.7]
STRCI_006849  [KO:K10439]
STRCI_006850  [KO:K10440]
STRCI_006879  [KO:K09692]
STRCI_006880  [KO:K09693] [EC:7.5.2.4]
STRCI_006974  [KO:K10562] [EC:7.5.2.-]
STRCI_006975  [KO:K10440]
STRCI_006976  [KO:K10439]
STRCI_007063  [KO:K17244]
STRCI_007064  [KO:K17245]
STRCI_007065  [KO:K17246]
STRCI_007071  [KO:K10439]
STRCI_007180  [KO:K07335]
STRCI_007322  [KO:K10562] [EC:7.5.2.-]
STRCI_007323  [KO:K10560]
STRCI_007324  [KO:K10561]
STRCI_007325  rhaS; rhamnose ABC transporter substrate-binding protein [KO:K10559]
STRCI_007526  [KO:K01996]
STRCI_007527  [KO:K01995]
STRCI_007528  [KO:K01997]
STRCI_007529  [KO:K01998]
STRCI_007582  [KO:K02012]
STRCI_007583  [KO:K02011]
STRCI_007584  [KO:K02010] [EC:7.2.2.7]
STRCI_007704  [KO:K02006]
STRCI_007705  cbiQ; cobalt ECF transporter T component CbiQ [KO:K02008]
STRCI_007706  [KO:K02009]
STRCI_007707  [KO:K02007]
STRCI_007765  [KO:K23508]
STRCI_007766  [KO:K10820] [EC:7.5.2.9]
STRCI_007767  [KO:K23509]
STRCI_007768  [KO:K23509]
STRCI_007822  modA; molybdate ABC transporter substrate-binding protein [KO:K02020]
STRCI_007881  [KO:K17329]
STRCI_007882  [KO:K17330]
STRCI_007883  [KO:K17331]
STRCI_008077  [KO:K11069]
STRCI_008078  [KO:K11071]
STRCI_008079  [KO:K11070]
STRCI_008080  [KO:K11072] [EC:7.6.2.11]
STRCI_008119  [KO:K01999]
STRCI_008423  [KO:K17324]
STRCI_008424  [KO:K17325]
STRCI_008520  [KO:K18230]
Compound
C00009  Orthophosphate
C00025  L-Glutamate
C00031  D-Glucose
C00032  Heme
C00034  Manganese
C00037  Glycine
C00038  Zinc cation
C00041  L-Alanine
C00047  L-Lysine
C00049  L-Aspartate
C00051  Glutathione
C00059  Sulfate
C00062  L-Arginine
C00064  L-Glutamine
C00065  L-Serine
C00070  Copper
C00077  L-Ornithine
C00079  L-Phenylalanine
C00086  Urea
C00088  Nitrite
C00089  Sucrose
C00093  sn-Glycerol 3-phosphate
C00095  D-Fructose
C00098  Oligopeptide
C00107  Dipeptide
C00114  Choline
C00116  Glycerol
C00120  Biotin
C00121  D-Ribose
C00123  L-Leucine
C00134  Putrescine
C00135  L-Histidine
C00137  myo-Inositol
C00140  N-Acetyl-D-glucosamine
C00148  L-Proline
C00151  L-Amino acid
C00159  D-Mannose
C00175  Cobalt ion
C00181  D-Xylose
C00183  L-Valine
C00185  Cellobiose
C00188  L-Threonine
C00208  Maltose
C00212  Adenosine
C00243  Lactose
C00244  Nitrate
C00245  Taurine
C00255  Riboflavin
C00259  L-Arabinose
C00288  HCO3-
C00291  Nickel
C00294  Inosine
C00299  Uridine
C00315  Spermidine
C00320  Thiosulfate
C00330  Deoxyguanosine
C00333  D-Galacturonate
C00338  Lipopolysaccharide
C00378  Thiamine
C00379  Xylitol
C00387  Guanosine
C00392  Mannitol
C00407  L-Isoleucine
C00430  5-Aminolevulinate
C00470  Pectate
C00475  Cytidine
C00487  Carnitine
C00491  L-Cystine
C00492  Raffinose
C00503  Erythritol
C00526  Deoxyuridine
C00559  Deoxyadenosine
C00719  Betaine
C00794  D-Sorbitol
C00855  D-Methionine
C00865  Phospholipid
C00881  Deoxycytidine
C00919  Choline sulfate
C00973  Cyclomaltodextrin
C01083  alpha,alpha-Trehalose
C01153  Orthophosphoric monoester
C01157  Hydroxyproline
C01177  Inositol 1-phosphate
C01181  4-Trimethylammoniobutanoate
C01279  4-Amino-5-hydroxymethyl-2-methylpyrimidine
C01330  Sodium cation
C01417  Cyanate
C01487  D-Allose
C01606  Phthalate
C01630  Xylobiose
C01667  Bacitracin
C01674  Chitobiose
C01682  Nopaline
C01684  D-Rhamnose
C01762  Xanthosine
C01834  Lipoprotein
C01835  Maltotriose
C01935  Maltodextrin
C01946  Oleandomycin
C02160  Isomaltotriose
C02273  Digalacturonate
C03557  2-Aminoethylphosphonate
C03611  Galactose oligosaccharide
C03619  Methyl beta-D-galactoside
C04114  (E)-4-(Trimethylammonio)but-2-enoate
C04137  Octopine
C05349  Ciprofloxacin
C05402  Melibiose
C05512  Deoxyinosine
C05776  Vitamin B12
C06227  Fe(III)hydroxamate
C06229  Fe(III)dicitrate
C06230  Fe-enterobactin
C06232  Molybdate
C06687  Norfloxacin
C06705  Capsular polysaccharide
C06706  Lipo-oligosaccharide
C06707  Teichoic acid
C06767  Hemine
C07662  Sparfloxacin
C07663  Moxifloxacin
C11612  Polymyxin B
C13768  Colistin sulfate
C14818  Fe2+
C14819  Fe3+
C15521  Alkanesulfonate
C15719  Coelichelin
C16421  AI-2
C16692  Mannopine
C19609  Nickel(2+)
C19872  N-Formyl-4-amino-5-aminomethyl-2-methylpyrimidine
C20570  alpha-1,5-L-Arabinobiose
C20571  alpha-1,5-L-Arabinotriose
C20572  alpha-1,5-L-Arabinotetraose
C20573  Aldotetraouronic acid
C20679  Tungstate
C21066  D-Galactofuranose
C22040  S-Methyl-L-cysteine
G00457  Maltotetraose
Reference
PMID:9799792
  Authors
Tomii K, Kanehisa M.
  Title
A comparative analysis of ABC transporters in complete microbial genomes.
  Journal
Genome Res 8:1048-59 (1998)
DOI:10.1101/gr.8.10.1048
Reference
  Authors
Sperandeo P, Lau FK, Carpentieri A, De Castro C, Molinaro A, Deho G, Silhavy TJ, Polissi A
  Title
Functional analysis of the protein machinery required for transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
J Bacteriol 190:4460-9 (2008)
DOI:10.1128/JB.00270-08
Reference
  Authors
Ruiz N, Gronenberg LS, Kahne D, Silhavy TJ
  Title
Identification of two inner-membrane proteins required for the transport of lipopolysaccharide to the outer membrane of Escherichia coli.
  Journal
Proc Natl Acad Sci U S A 105:5537-42 (2008)
DOI:10.1073/pnas.0801196105
Reference
  Authors
Omata T, Price GD, Badger MR, Okamura M, Gohta S, Ogawa T
  Title
Identification of an ATP-binding cassette transporter involved in bicarbonate uptake in the cyanobacterium Synechococcus sp. strain PCC 7942.
  Journal
Proc Natl Acad Sci U S A 96:13571-6 (1999)
DOI:10.1073/pnas.96.23.13571
Reference
  Authors
Quintero MJ, Montesinos ML, Herrero A, Flores E
  Title
Identification of genes encoding amino acid permeases by inactivation of selected ORFs from the Synechocystis genomic sequence.
  Journal
Genome Res 11:2034-40 (2001)
DOI:10.1101/gr.196301
Reference
  Authors
Picossi S, Montesinos ML, Pernil R, Lichtle C, Herrero A, Flores E
  Title
ABC-type neutral amino acid permease N-I is required for optimal diazotrophic growth and is repressed in the heterocysts of Anabaena sp. strain PCC 7120.
  Journal
Mol Microbiol 57:1582-92 (2005)
DOI:10.1111/j.1365-2958.2005.04791.x
Reference
  Authors
Valladares A, Montesinos ML, Herrero A, Flores E.
  Title
An ABC-type, high-affinity urea permease identified in cyanobacteria.
  Journal
Mol Microbiol 43:703-15 (2002)
DOI:10.1046/j.1365-2958.2002.02778.x
Reference
  Authors
Richard-Fogal CL, Frawley ER, Kranz RG
  Title
Topology and function of CcmD in cytochrome c maturation.
  Journal
J Bacteriol 190:3489-93 (2008)
DOI:10.1128/JB.00146-08
Reference
  Authors
Suzuki H, Koyanagi T, Izuka S, Onishi A, Kumagai H
  Title
The yliA, -B, -C, and -D genes of Escherichia coli K-12 encode a novel glutathione importer with an ATP-binding cassette.
  Journal
J Bacteriol 187:5861-7 (2005)
DOI:10.1128/JB.187.17.5861-5867.2005
Reference
  Authors
Novikova M, Metlitskaya A, Datsenko K, Kazakov T, Kazakov A, Wanner B, Severinov K
  Title
The Escherichia coli Yej transporter is required for the uptake of translation inhibitor microcin C.
  Journal
J Bacteriol 189:8361-5 (2007)
DOI:10.1128/JB.01028-07
Reference
  Authors
Tikhonova EB, Devroy VK, Lau SY, Zgurskaya HI
  Title
Reconstitution of the Escherichia coli macrolide transporter: the periplasmic membrane fusion protein MacA stimulates the ATPase activity of MacB.
  Journal
Mol Microbiol 63:895-910 (2007)
DOI:10.1111/j.1365-2958.2006.05549.x
Reference
  Authors
Yamanaka H, Kobayashi H, Takahashi E, Okamoto K
  Title
MacAB is involved in the secretion of Escherichia coli heat-stable enterotoxin II.
  Journal
J Bacteriol 190:7693-8 (2008)
DOI:10.1128/JB.00853-08
KO pathway
ko02010   

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