Sphingobium cloacae: SCLO_1001530
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Entry
SCLO_1001530 CDS
T05301
Name
(GenBank) RND transporter
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sclo
Sphingobium cloacae
Pathway
sclo01501
beta-Lactam resistance
sclo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sclo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SCLO_1001530
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCLO_1001530
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sclo02000
]
SCLO_1001530
01504 Antimicrobial resistance genes [BR:
sclo01504
]
SCLO_1001530
Transporters [BR:
sclo02000
]
Other transporters
Pores ion channels [TC:
1
]
SCLO_1001530
Antimicrobial resistance genes [BR:
sclo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
SCLO_1001530
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
SCLO_1001530
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
SCLO_1001530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF1707
YtxC
DUF2126
Motif
Other DBs
NCBI-ProteinID:
BAV63193
UniProt:
A0A1E1EY62
LinkDB
All DBs
Position
SCLO_1:170851..172257
Genome browser
AA seq
468 aa
AA seq
DB search
MVGVTGCSFAPEHVRPPQPVPPTYEAANIAGTTIARIGWHDFFREAELQRLIGEALANNR
DIRIAATRVAEVRAAWRIEGSSLYPQLDAVGTGTRGRTLFNLPGAGATPVDVKQISAQLS
ASWEIDFWGRLRNLRDAARWQYLATEEARRAVASQLVAQVANGYLLEREYEERVALARHS
IETREEALRIMRRRYEVGSGSKLEMTQAQLLLGQANTTMQGLEQDRAVNRNALAVLIGRP
VEIASGTLSLTDVPERLTLPAGLPSDLLANRPDIVASEYQLRAASANIGAARAAFFPNIS
LTGAYGTMSDELDGLFSGGSEAWSFTPTIRLPLFNAGRLKGNLDVARARQERAVAQYEQT
VQSAFRDVSDALVRRQQLQLQIDTTQQMLDAQRERARLAQLRFDNGRSAYLEVLDAQRDL
FDAEQALVQLRRAELASIVVLYSALGGGFVADDAFDGNLSNRNGEQSQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggtgggtgtgaccggctgctcttttgcgcctgagcatgtccggccaccccagccggtg
ccgccgacctacgaggcggccaacatcgccgggaccacgatcgcgcgcatcggttggcac
gacttcttccgggaagccgagttgcagcggctgatcggcgaggcgctcgcgaacaatcgc
gatatccgcatcgcggcgacccgcgtcgccgaggtccgcgccgcctggcggatcgagggc
tcctcgctctatccgcagctcgatgcggtcggcacgggaacgcggggccggaccctgttc
aatctccccggcgcgggcgctacgcctgtcgatgtcaaacagatcagcgcgcagctctcg
gccagttgggagatcgacttctggggacggctgcgcaacctgcgcgatgccgcgcgctgg
cagtatctggcgaccgaggaagcgcgccgcgcggtcgcgagccagctcgtcgcgcaggtc
gccaacggctatcttctcgaacgggaatatgaggaacgggtcgcactcgcccggcactcg
atcgaaacgcgcgaggaagcgctgcgcatcatgcgccgccgctatgaggtgggatcggga
tcgaagctcgagatgacccaggcgcagctgctcctgggccaggccaatacgacgatgcag
gggctggagcaggaccgggccgtcaaccgcaatgctcttgcggtgctgatcgggcggcct
gtcgagatcgcgtccgggaccctgtctctgaccgacgtgcccgaacggctcacgctgcct
gccgggctgccctccgaccttctggccaaccgcccggatatcgtggcgtccgaatatcag
ctgcgcgccgccagcgccaatatcggcgcggcgcgggcggccttttttccgaacatcagc
ctgacgggcgcatacggcacgatgagcgatgagttggacgggctgttctccggcggcagc
gaggcgtggagcttcaccccgaccatccgccttccgcttttcaacgcgggacgcctgaag
ggcaatctcgacgtggccagggcccggcaggaacgggcggtcgcgcaatatgaacagacc
gtgcaatcggcgttccgcgacgtgtccgatgcccttgtccgccggcagcagttgcagctg
cagatcgacacgacacagcagatgctggacgcccagcgcgaacgcgcgcggctcgcccag
cttcgcttcgacaatggccgctcggcctatctggaggtgctggatgcccagcgcgacctg
ttcgacgccgaacaggccctggtccagcttcggcgggccgaactggccagcatcgtcgta
ctttattcggcgctgggcggaggatttgtcgcggacgacgccttcgacggcaacctatcg
aacagaaacggggaacagtcacaatga
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