Solitalea canadensis: Solca_3950
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Entry
Solca_3950 CDS
T02084
Name
(GenBank) efflux transporter, outer membrane factor lipoprotein, NodT family
KO
K18139
outer membrane protein, multidrug efflux system
Organism
scn
Solitalea canadensis
Pathway
scn01501
beta-Lactam resistance
scn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Solca_3950
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Solca_3950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scn02000
]
Solca_3950
01504 Antimicrobial resistance genes [BR:
scn01504
]
Solca_3950
Transporters [BR:
scn02000
]
Other transporters
Pores ion channels [TC:
1
]
Solca_3950
Antimicrobial resistance genes [BR:
scn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
Solca_3950
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
Solca_3950
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
Solca_3950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PAV1-137_bromodom-like
Motif
Other DBs
NCBI-ProteinID:
AFD08945
UniProt:
H8KM23
LinkDB
All DBs
Position
complement(4599922..4601346)
Genome browser
AA seq
474 aa
AA seq
DB search
MMKNKFQLGVALLALSASFNACRVSEKYARPDQKMPEQYRDYTSSADTSSSIGKLEWRTL
FKDEELVSLIDSAIHNNINLQLAVKNIESAERLLSQAKMGNIPELSAQIAASITRPSDNS
LNGISAGQFLGSKYVKDYQATLNLSWEADIWGKIRSQKESALATYLQSQEAAKAVQTQVV
AAVAQGYYNLLMLDEQLRIAKNNVELNDSTLFIIRLQRDAGQATTLAVQQAEAQRLNSAI
LIPQLEQSIAIQENALSFLTGEMPKVITRRQNLYRVDLPTEYNSGVPALLLSNRPDVKSS
ELALVSANARVGVTKAALYPSLTITATGGLNAFEASNWFNIPGSLFATAAGSVAQPIFMR
KQLRTQYELAKIDRDRFALDFRQSVLIAVGEVSDALVRIDKIQEQETIERTRVDTLKSAI
VNAKLLFNSGMADYLEVLIAQGSALQGELNLADIQRQRLALAVELYRSLGGGWK
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaataaatttcagttaggtgtagctcttttggccttatcggcaagctttaat
gcttgccgcgtaagcgaaaaatatgcgcgtcctgatcagaaaatgccggaacaataccgc
gattatacttcttcagctgataccagttcttccataggaaaattagaatggagaacgtta
tttaaagatgaagagttagtatcacttattgacagtgcaatacataataatatcaatctt
cagctggcggttaaaaacatagaaagtgcagagcgattattgagtcaggcgaagatggga
aacatcccggaattatcggcacaaattgcggcatcaatcactcgtccttctgataatagc
ttaaatggtatcagtgctggacaatttttaggctcaaaatatgtaaaagattatcaggca
accttgaacctttcatgggaagctgatatctggggaaaaatccgatcgcaaaaggagtct
gctttagctacctaccttcaaagccaggaagctgccaaagctgtacaaacgcaagtagtt
gcggccgttgcacaaggttattataacctgttgatgctagatgaacaactccgcattgcc
aaaaacaatgtggaactaaatgatagcacattgtttatcattcgtttacagcgagatgcc
ggacaggcaactacattggctgttcagcaggctgaggctcaaaggctgaattctgcaata
ttaattccgcaactggaacaaagcattgccattcaggaaaatgcgcttagcttcttaacc
ggtgagatgcccaaagtaattacacgtcgacaaaatctttaccgtgttgaccttccaacg
gaatataactcaggtgttccagcattattgctaagtaacagacccgacgtaaagtcaagt
gaacttgccctcgttagtgcaaatgcccgagttggtgttactaaggctgcgctttatccc
tcattgacgatcaccgctaccggaggattaaatgcatttgaggcaagcaattggttcaat
attccgggatcgttgtttgcaactgcagctggttctgtagctcaacctattttcatgcgt
aaacaattgagaactcaatatgagttggcaaaaattgatcgcgataggtttgcccttgat
ttccgtcaatcggtacttatagcggttggagaagtttctgatgctttagtaaggattgat
aaaatacaagagcaggaaaccatcgaaagaactagggtggatactctgaaatcggccatt
gtaaatgccaaactattgtttaacagtggaatggctgattatcttgaagtcttaattgca
cagggaagtgcattgcaaggtgaactaaacctggcggatattcaacgtcagcgtttagcg
ctagctgttgaattataccgttcattgggcggtggctggaaataa
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