Solitalea canadensis: Solca_4485
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Entry
Solca_4485 CDS
T02084
Name
(GenBank) outer membrane protein
KO
K12340
outer membrane protein
Organism
scn
Solitalea canadensis
Pathway
scn01501
beta-Lactam resistance
scn01503
Cationic antimicrobial peptide (CAMP) resistance
scn02020
Two-component system
scn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scn00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Solca_4485
09132 Signal transduction
02020 Two-component system
Solca_4485
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Solca_4485
01503 Cationic antimicrobial peptide (CAMP) resistance
Solca_4485
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scn02000
]
Solca_4485
02044 Secretion system [BR:
scn02044
]
Solca_4485
01504 Antimicrobial resistance genes [BR:
scn01504
]
Solca_4485
Transporters [BR:
scn02000
]
Other transporters
Pores ion channels [TC:
1
]
Solca_4485
Secretion system [BR:
scn02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Solca_4485
RTX toxin transporter
Solca_4485
Multiple protein transporter
Solca_4485
RaxAB-RaxC type I secretion system protein
Solca_4485
Antimicrobial resistance genes [BR:
scn01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Solca_4485
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Solca_4485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PA2201_N
Ribophorin_II_2nd
Motif
Other DBs
NCBI-ProteinID:
AFD09475
UniProt:
H8KNE2
LinkDB
All DBs
Position
complement(5195872..5197191)
Genome browser
AA seq
439 aa
AA seq
DB search
MNKSVAARKFSLEAEKNSYLPGIDLLAGYQHLSKPLEINLQTVKDGIVEGSSQQSVNTAN
EVYKEITGNNLPQAVQDRIYSLSKNVISTIYPDYNPPLNKQDYFTASLGIRQPLYLGGKL
STARNIAQNEYDAGNINLELTQKGVDFALAVQYLRMMYVNSILQKENTIVDIFKQNRDRA
DELVKNELIPPYLRNWTNVALTQAQTRKNNIDLEKKNIQVEINRLMGSPLDSALTIADTL
RFSKANLAVEQSSFWAQNPSYKFIENKTNLAESTVKASRSLQLPNIFAIGNVNLYQKDLP
VTTPPWLVGVEMQWTLFSGFRNTKRVSATKQLVEEAKLAQENTRTGLQAQLTIVNNKLTA
LENDIASLDTARSQAAVTTTMVRERLNNEFSTVKDVNDAIIVQEEIEKAYYTAVLGYYVA
LAEYWNLMGTPQRITEFIK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatcagttgcagccagaaagttttcgctagaagctgaaaagaatagttattta
cccggcatagacttgctagcaggctatcaacatctctcaaagccgcttgagattaattta
caaactgtaaaagatggcattgttgaaggctcgtcccaacagagtgttaacactgccaat
gaagtttataaagaaataaccggaaataaccttccacaggcagtgcaggaccgcatttat
tctttgtcgaaaaatgttattagtactatttaccctgattataatcctccattaaataag
caagattactttactgcttccttgggtattcgtcagccactttacctcggaggcaaactg
tcaacagccagaaatattgctcaaaatgaatatgatgctggcaacatcaaccttgaatta
acgcaaaagggagttgattttgcccttgcagttcaatatttaagaatgatgtatgtcaac
tcgattttacagaaagaaaatacaattgttgacatcttcaaacagaacagggatagagcc
gatgaactagtaaaaaatgagttaatccctccttatctacggaattggaccaatgtagca
ttaacccaggctcaaacccggaaaaacaacattgatttggaaaagaaaaacatccaagtt
gaaattaacagattaatgggttctcctttagactctgctttaacgatagctgatacacta
cggttttcgaaagctaatttagcagtcgaacaaagctcattctgggcacaaaacccttcc
tataagtttatcgaaaacaaaaccaatcttgcagaaagcaccgtaaaagcaagtcgctct
ttacaattgcctaacatttttgctatcggaaacgtaaacttatatcaaaaggatttaccg
gtaaccactcctccttggcttgttggagtagaaatgcaatggacactattcagtggtttt
agaaacaccaaacgagtaagcgcgactaaacaattagtcgaggaagcgaaattagcacaa
gaaaatacacgaacaggtttacaagctcagttaaccatagttaacaataagctaacagca
ttagaaaacgatattgcctcattagatacagctcggtcacaagcagctgttacaaccact
atggttcgagaacgtctaaacaatgagttttcaacggttaaagatgtaaacgatgccata
atagtgcaggaagaaatagaaaaagcttattacacggcagtattaggctattatgttgct
ttagctgagtattggaatttaatgggaactccacagcgaataactgaattcattaaataa
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