Salinivibrio costicola: HBA18_11650
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Entry
HBA18_11650 CDS
T06511
Symbol
tolC
Name
(GenBank) outer membrane channel protein TolC
KO
K12340
outer membrane protein
Organism
scot
Salinivibrio costicola
Pathway
scot01501
beta-Lactam resistance
scot01503
Cationic antimicrobial peptide (CAMP) resistance
scot02020
Two-component system
scot03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scot00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HBA18_11650 (tolC)
09132 Signal transduction
02020 Two-component system
HBA18_11650 (tolC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HBA18_11650 (tolC)
01503 Cationic antimicrobial peptide (CAMP) resistance
HBA18_11650 (tolC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scot02000
]
HBA18_11650 (tolC)
02044 Secretion system [BR:
scot02044
]
HBA18_11650 (tolC)
01504 Antimicrobial resistance genes [BR:
scot01504
]
HBA18_11650 (tolC)
Transporters [BR:
scot02000
]
Other transporters
Pores ion channels [TC:
1
]
HBA18_11650 (tolC)
Secretion system [BR:
scot02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
HBA18_11650 (tolC)
RTX toxin transporter
HBA18_11650 (tolC)
Multiple protein transporter
HBA18_11650 (tolC)
RaxAB-RaxC type I secretion system protein
HBA18_11650 (tolC)
Antimicrobial resistance genes [BR:
scot01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
HBA18_11650 (tolC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
HBA18_11650 (tolC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
SpGH101_helical
Mfa1
Motif
Other DBs
NCBI-ProteinID:
QIR06959
LinkDB
All DBs
Position
1:2488501..2489811
Genome browser
AA seq
436 aa
AA seq
DB search
MKKLLPLALGLALGSLSSVALADDLAQIYQQAKQSDPTLNQAAAERDAAFSAVDATRGTL
LPQIGLNAGYSITRNDSNDQRDNNTTSADISLSQQIFKRDSWINLDISEMQARQLDAVYA
AQQQGLMLRVAQAYFDVLRAMDKLEFVKAEKAAVGRQLEQTKQRFEVGLSAITDVHDAQA
QYDAVLADEILAQNALTNSYEGLREITGEAPRDLRVLDTARFSASKPQQQPTALVETAEE
KNLKLLASRIARDTAKEQIKLAESGHLPTLTFSAKYGMTDVDNQHTPGSVDSNEGTAGLT
FSLPLFTGGSTSANVEKAQYNYVAASESLEATFRSTVKDVRAFYNDINASIGALRAYEQT
VISARSALEATEAGFEVGTRTIVDVLDATRRLYDANRNLSNARYDYILSRLQLRQAVGTL
SEQDLLEINKGLIEKR
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaattgctccctttggctttaggcttggcactcggcagcctaagctccgtggct
ctagccgacgatctcgcccaaatttaccaacaagcgaagcaaagtgatcccacactcaat
caagccgccgctgaacgtgacgctgcgttttcagccgtggatgcaacgcgcggtacattg
ctaccacaaattgggttaaatgccggctattcgattacccgcaatgacagcaacgatcag
cgtgacaataacaccaccagcgcagacatcagtctaagccaacaaatttttaagcgtgat
agctggatcaacctcgatatcagcgaaatgcaagctcgtcagctagatgccgtttacgct
gcgcaacaacaaggcttgatgctgcgtgtcgcacaggcctactttgacgtactccgtgcc
atggacaagctggaatttgtcaaagcagagaaagcggcggttggccgtcagcttgagcaa
accaaacaacgtttcgaagtcgggctctccgcgattaccgacgtacacgatgcacaagcg
caatatgacgcagtactcgccgacgaaatcttggcccagaatgccctcaccaatagctat
gaaggcttgcgtgagatcactggcgaagcgccacgtgatttgcgcgtgttagataccgct
cgttttagcgcgagtaaacctcagcagcaaccaaccgcgttggttgaaactgccgaagag
aaaaacttgaagctgttggcaagccgtattgcccgtgatactgccaaagagcaaatcaag
ctagctgagtctggccatcttccgactttaacgtttagcgctaagtacggcatgacagat
gtcgataatcagcatactccaggctcagtcgattctaacgaagggactgccggactcacc
tttagtttgccgctgtttacgggcggaagcacctcagcgaatgttgagaaagcgcaatat
aactacgttgcagcctcggaaagcctggaagccacgttccgttcaaccgttaaggatgtt
cgcgccttctataacgacattaatgcttctatcggtgccttgcgtgcctatgaacaaacg
gtcatttctgcgcgttcagcccttgaagcgaccgaagctggctttgaagtgggcacacgt
accattgtggatgtccttgatgccacacgccgcctgtacgatgccaaccgtaacctgtcg
aatgcgcgttacgactacatcttaagccgccttcagttgcgtcaagccgtggggacactt
agcgagcaggacttgctagaaatcaacaaaggcttgattgaaaagcgctaa
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