Staphylococcus condimenti: A4G25_01025
Help
Entry
A4G25_01025 CDS
T04648
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
scv
Staphylococcus condimenti
Pathway
scv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
scv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A4G25_01025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scv03400
]
A4G25_01025
Enzymes [BR:
scv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
A4G25_01025
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
A4G25_01025
DNA repair and recombination proteins [BR:
scv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
A4G25_01025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
DZR
Zn_ribbon_Nudix
Zn_ribbon_6
Zn_ribbon_TFIIB
DZR_2
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AMY04575
UniProt:
A0A143P7T3
LinkDB
All DBs
Position
188708..189580
Genome browser
AA seq
290 aa
AA seq
DB search
MPELPEVEHVKRGIEPLVLNQRIDEVEFSDAVINGKEIGKDTIIKQIDLPMFKLYSEGYK
ITQVERRSKYILFHIETENDKRVLVSHLGMSGGFFVVDTLEDIIVPNYKKHWHVNFKLSN
GKQLIYSDIRRFGEIKNVADLSAHSSFSEMAPEPFNEEALAYFQHQLNKKIYQNKPIKQV
ILDHKVIAGCGNIYACEALFNAKINPERSVNSLNADEQQRVFDEVVKVLRLGIENGGTSI
SSYRHADGKTGEMQNYLNVYKKKVCPACGGPIQTKVIAGRNTHYCPQCQK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgccggaattaccagaagttgaacatgtaaaacgcggcattgaaccgttagtattaaat
caacgtattgatgaagttgaattctcagatgctgtcatcaacgggaaagaaattggaaaa
gatacgattattaaacaaatagatttaccaatgtttaaattatattcagaaggctataaa
attacacaggttgaacgaagaagtaaatatatactttttcatattgaaactgaaaatgac
aaaagagtgctagtaagtcatttagggatgtcaggtggtttctttgttgttgatacatta
gaagatattattgtcccaaactacaaaaaacattggcatgtcaattttaaattaagtaat
ggtaaacagcttatatattcagatatacgacgttttggtgaaattaagaatgtagcagat
ttatctgcgcattcttctttttccgaaatggcaccagaaccgtttaatgaagaagctctt
gcgtattttcaacatcagttaaataaaaaaatatatcaaaataaaccgattaaacaggtg
attttagatcacaaagttattgcaggatgcggaaatatatatgcttgtgaagctttgttt
aatgcaaaaatcaatcctgaacgtagtgtgaattcactaaatgcggatgaacaacaacgt
gtatttgatgaagtagtgaaagtattacgtttaggtattgaaaatggcggtacaagcatt
tcctcttatcgtcacgctgatggtaaaacaggagaaatgcagaattatttaaatgtatat
aaaaagaaagtttgcccagcttgcggcggaccgattcaaacaaaagtcattgcgggcaga
aacacacactattgtccacaatgccaaaaatag
DBGET
integrated database retrieval system
