KEGG   Staphylococcus condimenti: A4G25_01315
Entry
A4G25_01315       CDS       T04648                                 
Name
(GenBank) RecD/TraA family helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
scv  Staphylococcus condimenti
Pathway
scv03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:scv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    A4G25_01315
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:scv03400]
    A4G25_01315
Enzymes [BR:scv01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     A4G25_01315
DNA repair and recombination proteins [BR:scv03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A4G25_01315
SSDB
Motif
Pfam: AAA_30 AAA_19 HHH_RecD2 OB_YrrC SH3_13 UvrD_C_2 Viral_helicase1 AAA_11 AAA_22 HHH_5 Rad17 AAA_14 AAA Mg_chelatase nSTAND3 PIF1 T4_y05I_C TsaE T2SSE DUF815 ABC_tran HHH_3 AAA_16 AAA_17 AAA_29 NPHP3_N AAA_28 AAA_18 Zeta_toxin UvrD-helicase RsgA_GTPase NTPase_1 SLFN-g3_helicase AAA_12 NACHT UvrD_C
Other DBs
NCBI-ProteinID: AMY04630
UniProt: A0A143P8G5
LinkDB
Position
250747..253167
AA seq 806 aa
MSNPTLFDYSMVKGTVEAILFQNKENFYTVLKVDPIETNEEFDSMPTVVGFFPEIAEGDV
YTFKGQAVTHPRYGKQLKAETFEKELPQTKDAIVSYLSSDLFKGIGKKTAENIVDTLGEN
AINKILDDEQVLAEVPHLSKKKQKQIAEQIYSNQEVEKIMIRLHDLGFGPKLSMNIYQVY
QVETLTEIEKNPYQLVYDVKGVGFNKADTLAKNLGIEYNDPERLKAGLLYTIEEECIKQG
HTYLPKDYVIEASQDTLSQVHSESIDAQLLEEMIVQLTEEEKLVEADETLSVPSLYYSEV
KSVQNLYRIEAHQTKLETIEQSDLQIHIGEIEDVNNVNYAASQKEALETAINSKVMLLTG
GPGTGKTTVIKGIVELYAEIHGLSLDYDDYNEDDYPVALAAPTGRAAKRLQESTGLEAMT
IHRLIGWSQETKPEDVLENEINAKLIIIDEMSMVDTWLFHQFLNAVPIDAQVILVGDEDQ
LPSVGPGQVFKDLIDSKVVPRVNLTEVYRQQDGSSIIELAHKMKLGQPIDITQRFHDRSF
IPCSADQIPDVVNKVVTSAVKKGYDMSDIQVLAPMYRGSAGIKRLNKVLQDILNPKQEDT
REIEFGDVVFRKGDKVLQLVNRPSDNIFNGDIGVIQGIFWAKENELNKDVLVVDFDGNEI
TFTKQDMMELTHAYCTSIHKAQGSEFPIVIMPVVKQYYRMLQRPIIYTGLTRAKQSLVFL
GDSQAFDIGMQTYGQVRMTRMAQLLRDYFGTEMSETTNETENDIDTNEIIAEQNSKVIAL
SEETIFEIDPMIGMGNVTPYSFANDK
NT seq 2421 nt   +upstreamnt  +downstreamnt
ttgagcaaccctacattatttgattattcaatggtcaaaggtacagttgaagctattctt
tttcaaaataaagaaaacttttacactgtattaaaagtagatccaatcgagacaaatgaa
gaatttgatagtatgccgaccgttgtagggttctttcctgaaattgcggaaggagatgtt
tatacttttaaaggtcaagctgtcactcaccctcgatatggcaagcaattaaaagctgag
acctttgaaaaagaactgccgcaaactaaagatgcgattgtaagttatctctcaagtgat
ttatttaaaggcatcgggaaaaaaacagcagaaaatatcgtcgacacacttggtgaaaat
gcgattaataaaattcttgatgatgaacaagtattggcagaagtaccgcatctgtctaag
aaaaagcaaaaacaaattgcagaacaaatttacagtaatcaagaagttgaaaaaatcatg
attcgtctgcatgatttaggtttcggtcctaaattatcgatgaatatttaccaagtttac
caagttgaaacactcactgaaattgagaagaatccgtatcagcttgtctatgatgttaaa
ggggtcggttttaataaagctgatactttagctaagaatcttggtattgaatacaatgat
cctgaacgattaaaagcaggattattatatacaattgaggaagaatgtattaaacaagga
catacgtatttgccgaaagattatgtgattgaagcttcacaagatactttatctcaagtg
catagcgaatccattgatgcccaattgttggaagagatgattgtacagctgactgaagaa
gaaaagttggtagaagcagatgaaacactttctgtaccaagtttatattattcagaagtt
aaaagtgtacaaaatttatatcgcattgaagcacatcaaacaaaactagagacaattgaa
caatcagacctgcagatacacattggagaaattgaagatgtcaataatgtaaattatgct
gcatctcaaaaagaagcacttgaaactgctataaattctaaagtcatgctgttaacaggc
gggcctggtacaggtaaaacaactgtgattaaaggtattgtagaattatatgctgaaatc
catggtctgtctcttgattatgatgattataacgaagatgattatcctgtcgctttagca
gcaccaacaggccgagctgctaaaagattgcaagaatctacgggattagaagctatgacg
atacatcgattaatcggttggagccaagaaacaaaaccagaagacgttcttgaaaatgaa
atcaacgctaagctgattattatcgacgaaatgtctatggtcgacacatggctgttccac
caatttttaaatgccgttccaattgatgcgcaagtcatcttagtaggagatgaagatcaa
ttaccttcagtaggtccagggcaagtatttaaagatttaattgattctaaagtagtgccg
cgtgtgaatctaactgaagtttatcgccaacaagacggttctagtattattgaattagca
cataaaatgaaactgggacagccaattgatattacacaacgatttcatgatcgcagtttt
ataccatgcagtgccgatcaaataccggatgtagttaataaagtggtaacctcagctgtg
aaaaaaggttatgatatgagtgatattcaagtacttgcaccgatgtacagaggcagtgct
ggtattaagcgtctgaataaagtacttcaagacattttaaatcctaaacaagaagataca
cgtgaaatcgaattcggagatgttgtttttcgaaaaggcgataaagtactgcaattagtt
aatcgaccaagcgataatatttttaacggagatattggcgtcattcaaggtatcttttgg
gcaaaagaaaatgaattgaataaagatgtgttagtcgttgattttgatggaaatgaaatt
acatttaccaaacaagatatgatggaacttacgcatgcttattgtacttccattcataaa
gcgcaaggttcagagtttccaattgtgataatgccggtagtcaaacaatattaccgcatg
ctgcaaagaccgattatttatacaggattaacgcgagctaaacaatctttagtttttcta
ggcgacagtcaagcctttgatattggtatgcaaacctatggtcaagtgcggatgacacgt
atggcacagctattgcgcgattatttcggtacagaaatgagcgaaacaacaaatgaaaca
gaaaatgatatagatacaaacgagataattgcagaacaaaattcaaaagtcattgcgtta
tcagaagaaacaatatttgaaattgacccgatgattggaatgggtaatgtcacaccttat
agtttcgcgaatgataaataa

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