Staphylococcus condimenti: A4G25_02865
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Entry
A4G25_02865 CDS
T04648
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
scv
Staphylococcus condimenti
Pathway
scv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
scv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A4G25_02865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
scv03019
]
A4G25_02865
03016 Transfer RNA biogenesis [BR:
scv03016
]
A4G25_02865
Enzymes [BR:
scv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A4G25_02865
Messenger RNA biogenesis [BR:
scv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A4G25_02865
Transfer RNA biogenesis [BR:
scv03016
]
Prokaryotic type
tRNA degradation factors
A4G25_02865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_2
SPATA25
KH_2
Motif
Other DBs
NCBI-ProteinID:
AMY04925
UniProt:
A0A143P8S1
LinkDB
All DBs
Position
complement(570097..572202)
Genome browser
AA seq
701 aa
AA seq
DB search
MSQEKKVFKTEWANRPLSIETGQMAKQANGAVLVRYGDTVVLSTATASKEPRDGDFFPLM
VNYEEKMYAAGKIPGGFKKREGRPADEATLTARLIDRPIRPLFPKGYRHDVQIINMVLSA
DPDCSPEMAAMIGSSMALSVSDIPFQGPIAGVNVGYIDGEYVINPTVEQKEVSRLDLEVA
GHRDAVNMVEAGASEITEKEMLDAIFFGHEEIKRLVDFQQEIIDYLQPEKTEFIPKERNA
EVEDKVTTLTEEKGLKDAIQTFDKKEREENIDAIRDEIIAEFEDEENPDNDEVIAEVNSI
LNDLVKEEVRRQIADEKVRPDGRKPNEIRPLDSEVGLLPRAHGSGLFTRGQTQALSVLTL
GAMSEYQLIDGLGTEEEKRFMHHYNFPNFSVGETGPVRAPGRREIGHGALGERALRYIIP
DTKDFPYTVRIVSEVLESNGSSSQASICGSTLALMDAGVPIKAPVAGIAMGLVTRDDNYT
ILTDIQGMEDALGDMDFKVAGTEKGITAIQMDIKIDGLTREIIEEALEQARVGRLTILNH
MLETIDQPRPELSAYAPKVETMTIKPEKIRDVIGPGGKKINEIIDETGVKLDIEQDGTIF
IGAVDQDMINRAREIIEDITREAEVGQVYNAKVRRIEKYGAFVELFPGKDALLHISQIAN
QRINKVEDVLKLGDTIEVKVTEIDDKGRVNASHRALLNKED
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaaaagaaagtgtttaagactgaatgggctaaccgaccattgtcgatagaa
acaggacagatggcgaaacaagcaaatggcgcggtgctcgtacgttatggtgacacagtt
gtgttatctacagcgactgcatcaaaagaaccacgtgacggcgacttcttcccattaatg
gtgaactatgaagaaaaaatgtatgctgcaggtaaaattcctggaggctttaaaaaacgt
gaaggccgtccagctgatgaagcaacattaactgcacgtttaatcgatagaccaatacgt
ccgttattccctaaaggttatagacatgacgttcaaataattaatatggtattgagtgct
gatcctgattgctcacctgaaatggctgcgatgatcggttcatctatggcattgagtgtt
tctgatattccattccaaggtccgattgcaggtgttaatgtcggatatattgatggagaa
tacgtgattaacccgacagtggaacaaaaagaagtttctcgtttggatttagaagttgca
ggtcatagagatgctgtaaacatggttgaagcaggcgcaagtgaaatcactgaaaaagag
atgctagacgctatctttttcggtcacgaagaaatcaagagattagttgacttccaacaa
gaaatcattgattatcttcaacctgaaaaaactgaattcattcctaaagagcgcaatgct
gaagtagaagacaaagttactactttaacagaagaaaaaggattgaaagatgctatccaa
acattcgataagaaagaacgtgaagaaaacatagatgcaatccgtgatgaaattattgct
gaatttgaagatgaagaaaatccagacaatgatgaagtaatcgcagaagtcaactcaatc
ttaaatgatttagtgaaagaagaagtacgccgtcaaatcgcagatgaaaaagttcgtcca
gatggtcgtaaaccgaatgaaatccgtccgcttgattctgaagtaggtctattacctcgt
gctcatggctcaggattattcacacgtggtcaaacacaagctctttctgtattgacatta
ggtgctatgagtgaatatcaattgattgatggtttaggaacagaagaagaaaaacgtttc
atgcatcattataatttccctaatttctcagttggtgaaactggaccagtacgtgctcca
gggcgtcgtgaaattggtcatggtgctttaggtgaacgtgcattacgttacattatccct
gatactaaagacttcccatatacagtgcgtattgtaagtgaagttttagaatctaatggt
tcttcatctcaagcatcaatttgcggttctacacttgcattaatggatgccggtgtacca
attaaagcacctgtagccggtattgcaatgggacttgttacacgtgatgataactataca
attttgacagatatccaaggtatggaagatgctttaggcgacatggactttaaagtagca
ggtactgaaaaaggtatcacagcaatccaaatggatattaaaattgatggtttaacacgc
gaaattattgaagaagctttagaacaagcacgtgtaggacgcttaacaatcttgaatcat
atgcttgaaacaattgatcaaccgcgtcctgaattgagtgcttatgcacctaaagttgaa
acaatgacaatcaaacctgaaaaaatcagagatgttattggacctggcggtaagaaaatc
aatgaaatcattgatgaaactggtgttaaattggatatcgaacaagacggtacaatcttt
atcggtgctgtagaccaagatatgattaatcgcgcacgtgaaatcattgaagatattaca
cgtgaagctgaagtaggacaagtttataatgcaaaagttagacgtattgaaaaatatggt
gcttttgtagaacttttcccaggcaaagatgctttattgcacatttctcaaattgcaaat
caacgtattaataaagttgaagatgtattgaaattgggagatacaattgaagtcaaagtc
actgaaatcgatgacaaaggcagagtgaatgcttcacaccgtgccttattgaataaagaa
gattaa
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