Staphylococcus condimenti: A4G25_02880
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Entry
A4G25_02880 CDS
T04648
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
scv
Staphylococcus condimenti
Brite
KEGG Orthology (KO) [BR:
scv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scv03016
]
A4G25_02880 (truB)
Enzymes [BR:
scv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
A4G25_02880 (truB)
Transfer RNA biogenesis [BR:
scv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A4G25_02880 (truB)
Prokaryotic type
A4G25_02880 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AMY04928
UniProt:
A0AB37H3Z2
LinkDB
All DBs
Position
complement(573751..574674)
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AA seq
307 aa
AA seq
DB search
MFNMEGILPVFKERGLTSHDVVFKLRKILHTKKVGHTGTLDPEVDGVLPVCIGNATKVSD
YIMDMGKAYEAEVTIGYSTTTEDQTGEVLEKRNVEQDQLSTQEIDAAIQSFKGEIEQIPP
MYSSVKVNGRKLYEYARNNETVERPKRKVKIYEIERTSEPEFHDGICSFNILIRCGKGTY
IRTLATDIGNVLNYPAHMSLLTRIESGGFQIKDSLKLDEVDHLFKQESLQERLFPIEYGL
KGLPHIRISNPEMKKRILNGQKFYKNDFTEAIEGVTVLVDSDTDKALALYIPHSEKPNEI
KPKKVFN
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
gtgtttaatatggagggtattttacctgtttttaaagaacgtggtcttacaagtcacgat
gtcgtctttaaactacgcaaaattttacatactaaaaaagttggccatacaggtacatta
gatccagaagtggatggtgtattacctgtatgtatcgggaatgcgactaaagtaagtgat
tatattatggatatgggaaaagcctatgaggctgaagttacgattggttacagtacaaca
actgaagatcaaactggtgaagtgttagagaaacggaatgtagaacaagaccaattatca
actcaagaaatagatgcagcaattcaatcatttaaaggtgaaattgaacagattccacct
atgtattcctcagtaaaagtaaacgggcgcaagttatatgaatatgctcgcaataacgag
acggttgaaagaccaaaacgtaaagtgaaaatttatgaaattgaacgaacatcagaacct
gaatttcatgatggtatatgcagttttaacatcttgattcgatgcggtaaaggtacgtat
atccgtacactagcaacagatatcggaaacgtattgaattatccggcacacatgtcactg
cttactcgtattgagagcggcggattccaaataaaagatagtttgaaattagatgaggtt
gatcatctttttaagcaagaatcattacaggaacgcttatttcctatagaatatggattg
aagggattacctcatattcgtattagtaacccagagatgaaaaaacgcattttaaatggg
cagaagttttataaaaatgattttacagaagcgattgaaggtgtgacggtattagttgat
agtgatactgacaaagcattagcattgtatataccgcattctgaaaaaccaaatgaaatc
aagccgaagaaagtttttaattaa
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