KEGG   Staphylococcus condimenti: A4G25_04145
Entry
A4G25_04145       CDS       T04648                                 
Name
(GenBank) ribonuclease J
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
scv  Staphylococcus condimenti
Pathway
scv03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:scv00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A4G25_04145
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:scv03019]
    A4G25_04145
Messenger RNA biogenesis [BR:scv03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     A4G25_04145
SSDB
Motif
Pfam: RNase_J_b_CASP RNase_J_C Lactamase_B Lactamase_B_2 RMMBL Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: AMY05167
UniProt: A0A143P9L1
LinkDB
Position
817702..819654
AA seq 650 aa
MKQLKNNEVGVYALGGLGEVGKNTYAVEYKDEIVLIDAGIKFPDDNLLGIDYVIPDYSYL
VQNKDKIVGLFITHGHEDHIGGVPFLLKELNIPIYGGPLALGLIRNKLEEHHLLRTAELH
EINEDTEIDSKYFNISFYLTTHSIPEAYGVIVDTPEGKIVHTGDFKFDFTPVGTPANIAK
MAKIGEEGVLCLLSDSTNALVPNFTLSEREVGQNVDKIFRKCTGRIIFATFASNIYRVQQ
AVEAAVKYNRKIVVFGRSMENNIKIGMELGYIKAPPETFIEPNKINSVPKHELLILCTGS
QGEPMAALSRIANGTHKQIKIIPEDTVVFSSSPIPGNTKSINRTINALYRAGADVIHSKI
SNIHTSGHGSQGDQQLMLRLIRPKFFMPIHGEYRMLKAHSQTGVQCGVEEDNVFIFDNGD
VLALTRDSARKAGRIPSGDVLVDGSGIGDIGNVVIRDRKLLSEEGLVIVVVSIDFNTNTL
LSGPDIISRGFVYMRESGHLIYDAQRKIKTDVIGKLNQNKDIQWHQIKSSIIETLQPYLY
EKTARKPMILPVIMKVNEDGEQITKPSKPKSNSKPKKNNKKGNGSNPKNESKNNQGGRPP
KRNNNGRNDQSKNNKPANKKESSSKSGSNSTQKPHPKPKNKPDSKKENKE
NT seq 1953 nt   +upstreamnt  +downstreamnt
atgaagcaactaaaaaataatgaagtcggcgtatacgcacttggcggacttggagaagtc
ggcaagaatacgtatgctgtcgaatataaagatgaaattgtccttattgatgcagggata
aaattccctgatgacaatttattagggattgactatgtcatccctgattattcttatctt
gtacaaaacaaagataagattgtcgggcttttcatcacacatggacatgaagaccatatc
ggcggtgtgcccttcttattaaaagaacttaatataccgatatatggcggtcctttagca
cttggacttatccgcaacaaattagaagaacatcatttgctaagaactgctgagttgcat
gaaatcaatgaagatacagaaattgattctaaatatttcaatatctcattttatctgact
actcacagtattccggaagcttacggtgtgattgtggatactccagaaggtaaaattgtg
catacaggtgatttcaaatttgatttcactcctgtcggcacacctgcgaatattgcaaaa
atggccaaaatcggtgaagaaggcgttttatgtcttctttctgattctaccaatgcttta
gtcccgaatttcactttaagtgaacgcgaagttggacaaaatgttgacaaaattttccgt
aaatgtacaggcagaattatttttgctacattcgcttctaacatttaccgcgtacaacaa
gctgttgaagcggctgttaaatataatcggaaaattgttgtttttggtcgttctatggaa
aataacattaaaatcgggatggaacttggttacattaaagcaccacctgaaacatttatt
gaacctaataaaatcaattcagtaccaaaacatgaattgttaattttatgtactggttct
caaggtgagccaatggctgcactttctagaattgcaaatggtacacacaaacaaattaaa
attattcctgaggatactgttgtattcagttcttcacctatcccaggcaacacaaaaagt
attaaccgtacaatcaatgcattgtaccgagctggtgcagatgttattcatagtaagatt
tctaatatccacacatcaggtcacggttctcaaggtgatcagcaactgatgcttcgtttg
attcgtccgaagttctttatgccgattcatggtgagtatcgtatgttgaaagcacattct
caaactggtgtgcaatgcggtgttgaagaagataatgtgtttatctttgataatggtgat
gtgttggcattaacaagagattctgcacgtaaagcaggacgtattccgtctggagatgtg
ctggtagatggaagcggtattggagacatcggtaatgttgttatccgtgaccgtaaattg
ttatctgaagaaggtttagtgattgttgtagtaagtatcgacttcaatacaaacactcta
ctttcaggtcctgatattatttctcgtggttttgtatacatgcgtgaatcaggtcattta
atttatgatgcacaacgtaaaattaaaacagatgtcatcggtaaattaaaccaaaacaaa
gatatacaatggcatcaaatcaagtcatctattatagaaacattgcaaccttatctttat
gaaaaaacagcacgtaaacccatgattttaccggtaattatgaaagtaaatgaagatggc
gagcaaattactaaaccatctaaaccgaaatcaaattctaaacctaagaaaaacaacaaa
aaaggtaatggttcgaacccaaaaaatgaatcaaaaaataatcaaggcggtcgtccacct
aaacgcaataataacggacgtaacgatcaatctaaaaacaataaacccgctaataaaaaa
gaatcaagttctaagtcaggttcaaacagtacacaaaaaccacatccaaaacctaaaaat
aaacctgattctaaaaaagaaaacaaagaatag

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