Staphylococcus condimenti: A4G25_05050
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Entry
A4G25_05050 CDS
T04648
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
scv
Staphylococcus condimenti
Brite
KEGG Orthology (KO) [BR:
scv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scv03400
]
A4G25_05050
Enzymes [BR:
scv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A4G25_05050
DNA repair and recombination proteins [BR:
scv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
A4G25_05050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AMY05338
UniProt:
A0A143PB73
LinkDB
All DBs
Position
complement(996268..999756)
Genome browser
AA seq
1162 aa
AA seq
DB search
MNKGGEVVSQLNAYIGRAGTGKSHAMLNEIKTKMKQDPLGDPIIIIAPTQSTFQLEQDFV
KDPELNGSLRTEVLHFERLSHRIFQEIGGLTEEYASKGALEMMIFDILQAHRSELNLYQS
QTKYYGFSAKLSEQIQDFKKYAVSPEQLEQFISENQLQTRTQDKLHDIALVYRYLEERLA
ENFVSSEDTLYKFIEKMSESKWLKRAEIYIDGFHNFSTLEYQIIEKLAQCAKSVSVLLTT
NGDKDPFSLFRKTSSTLTHIEEIAQRQNITFNLRRFTKQQRFENHDLSHLEHSFNEVFFE
KAAAKGNINILETSNVREEVNTIARDIIRKAREENIRFQDVAVLYRDENYAHLMESVFPE
FDIPFNIDTKKSMTHHPVMEMIRSLLEVIESKWSFEPLMRLFKTQVLTKKFRDNRYLTDI
LENYVLERGIYGQRWLDDKYFKIEQFNQMGLKRQPMTEETEADYQRVIDLKNYVIDKILR
FEKALAEADTAETYAAAFYEAFEQFNLPSQLMTERDELDLAGEHQQAEELDQVWNGFIQT
LDDLATVFGNREMTQKRFLELFDVGLEQLEFVMIPQTLDQVSIGSMDLAKVDNKKHIYML
GMNDGTMPQAISNSGLISDDEKKYFQEETQLELSPTADVLQMDEAFVCYIAMTRATTHVT
LSYSLMGLNNDDKEVSPFINNIQELFTNLDILNVQYAAQHNPLTVMEHPHQTKIALFEEL
QSWLNHELTADTWLEAYQAMMHNERLNRGLQYLTSALTFDNKTVQLNQPLSKALYGDKIN
ASVSRFEGYQQCPFKHYTSHGLRLNERTKYKLENFDLGDIFHSVLKYIADKIHGDFRNLT
DASIRKLTQEALENILPEVQYNLLNSSAYYRYMSVRIGAIVQSTLTALKYQGTFSKFRPQ
AFEKSFRKNPKSNEQLAAESLYTSQGIPINIRGQIDRIDTFNSKDRSFVNIIDYKSSEYS
GTLDLTKVYYGLQMQMMTYMDVVLQNKDRLDLAEATEPGGLLYFHVHEPRVNFANWAEMD
EDKRQEELLKSFKLNGLINSDPEVLDAEDTRLEPKFKSDIVPIDIGAKGNLNKSSKVADS
QTIYKFIEHNKNNFIQIASDIMDGHTEVAPMKYKQKLPCEYCNYRSVCHVDGMIDSKKYR
TVDESINPIDLLNQESDEEDNE
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaagggggagaagtcgtgagtcaattaaatgcatatattggacgagcaggcacg
ggtaaatcgcatgctatgcttaatgaaatcaaaacaaaaatgaaacaggatccacttggg
gatcccatcattatcattgcaccaacacaaagtaccttccaacttgagcaagactttgtg
aaggacccggaacttaatggaagtttacggacagaagtgctgcactttgagcggttaagt
catcgtattttccaagaaattggcggtttgactgaagaatatgcttctaaaggtgcgctt
gaaatgatgatttttgatattttacaagcacaccgttctgaactgaatttataccaatca
caaacaaaatattatggattcagcgctaagttaagtgagcaaattcaagattttaaaaag
tatgctgtttctcccgaacaactcgaacaatttatttctgaaaatcaattgcaaacaaga
actcaagataaattacatgacattgctttagtttatcgatacttagaagaacgtttagct
gaaaattttgtttcatctgaagatacactttataagtttatagaaaaaatgagtgaatca
aagtggttgaaaagagcagagatttacattgatggattccataacttttcaacgcttgaa
tatcaaattatagaaaaattagcgcaatgtgcaaaatcagtcagtgttttactcacaaca
aatggagataaagatccattcagtttgttcagaaaaacttcttctacacttacacatata
gaagaaattgcacaaagacaaaatatcactttcaatttacgcagatttacaaaacaacaa
agatttgaaaatcatgatttaagtcatttagaacattcgtttaatgaagtgttctttgaa
aaagctgcagcaaaaggcaatattaatattttagaaacttcgaatgtacgtgaagaagtc
aatacgattgcaagagacatcattcgaaaagcaagagaagaaaatattcgttttcaagat
gttgctgtactttatcgtgatgaaaattatgcacatctaatggaaagtgtattcccagaa
tttgatattccttttaacatcgatacgaagaaatctatgacacatcatcctgtcatggaa
atgatccgttctttattagaagtgattgaatcaaaatggagtttcgagcctttaatgcgt
ttatttaaaacacaagtattaactaaaaagtttagagataaccgttatctaacagatatt
ttagagaattatgtacttgagcgcggtatctatggacaacgctggttagacgataaatat
tttaaaattgaacaattcaatcaaatgggcttaaaacgtcaacctatgacggaagaaaca
gaagcagattatcaacgtgtgattgatctgaaaaattatgtcatagataaaattttacgt
tttgaaaaagcattggctgaagcggatactgctgaaacttatgcagcagcattttatgag
gcttttgagcaattcaacctgccgagtcagttaatgacagagcgtgatgaactggattta
gcaggagaacatcaacaagctgaagagctagatcaagtatggaatggctttattcaaaca
ttagacgacttagctactgttttcggcaatagagagatgacacaaaaacgattccttgaa
ttgtttgatgtgggattagaacaattagaatttgtgatgattcctcaaacattggaccaa
gtcagcattggtagtatggacttggctaaagttgataataagaaacatatctacatgtta
ggtatgaatgatggtactatgccgcaagcaatttcaaattctggtttgattagcgatgat
gaaaagaaatatttccaagaagaaacacagcttgaattaagccctacagctgatgtgctg
cagatggatgaagcgtttgtgtgttatattgcgatgacacgtgctacaacacatgtcaca
ttatcttatagtttgatgggtttgaataatgatgacaaagaagtcagtccgtttatcaat
aacattcaagaactttttacaaatctagatatattaaatgtacaatatgctgcccaacat
aatccgcttacagtgatggaacatccgcatcaaactaaaattgcactttttgaagaattg
caaagttggcttaaccatgaattaactgctgatacgtggttagaagcgtaccaagcaatg
atgcacaatgaacgtttaaacagaggattgcagtatttaacatctgcattaacgtttgat
aataaaactgttcaattaaatcaaccactctctaaagccttgtatggagataaaattaac
gccagtgtgtctcgatttgaaggataccagcaatgtccgttcaaacattacacttcacat
ggtttgcgtttaaatgaacgtacaaaatataaattagaaaacttcgacttaggcgacata
ttccactctgtattgaaatatattgcagataagattcatggtgattttcgtaatttaaca
gatgcttctatccgtaaacttacacaagaagcactggaaaatattttgccggaagttcaa
tataacttattgaactcatctgcttattatcgttatatgtctgtacgtattggtgcaatt
gtacaatcgacattaacagcgttgaaatatcaaggtactttctctaaattcagaccgcaa
gcttttgaaaaatcatttagaaaaaatccgaaatctaacgaacagcttgcagcagagtca
ctttatacttcacaagggattccgattaatatccgtggtcaaattgaccgtattgatacc
tttaatagtaaagaccgcagtttcgtaaatattatcgattataaatcatcagaatatagc
ggtactttagatttaacgaaagtttattacgggctgcagatgcagatgatgacttatatg
gatgtcgtactgcaaaataaagatcgtttggacttagcagaagcgactgaaccaggtgga
ttgttatattttcatgtacatgaacctcgtgtgaattttgccaactgggcagaaatggat
gaagacaagcgtcaagaagagttattgaagtcatttaaattaaatggtttgattaatagc
gaccctgaagtgttagatgctgaagatacgagattggaacctaaattcaaatcagatatt
gtgcctatagacattggtgcaaaaggtaatttgaataagagcagtaaagttgccgattct
caaactatatataaatttattgaacataataagaacaactttattcaaattgcttcggat
attatggatggtcatactgaagtagcacctatgaaatataaacagaaactgccttgtgaa
tattgtaattatcgttctgtttgtcatgtcgatggtatgattgatagtaaaaaatacaga
acagtagatgaaagtatcaatccaattgatttattaaatcaagaaagtgatgaggaggat
aacgaatga
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