Staphylococcus condimenti: A4G25_11575
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Entry
A4G25_11575 CDS
T04648
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
scv
Staphylococcus condimenti
Pathway
scv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
scv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A4G25_11575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scv03021
]
A4G25_11575
03400 DNA repair and recombination proteins [BR:
scv03400
]
A4G25_11575
Enzymes [BR:
scv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A4G25_11575
Transcription machinery [BR:
scv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A4G25_11575
DNA repair and recombination proteins [BR:
scv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A4G25_11575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
DUF961
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AMY06538
UniProt:
A0A143PEN5
LinkDB
All DBs
Position
2421532..2422476
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPRIETIEISEDAKFGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVKYIEIEG
VLHEFSAIDNVVEDVSTIIMNIKKLALKIYSEEDKTLEIDVKDEGEVTAADITHDSDVEI
LNPELKIATVSKGGHLKIRLVANKGRGYALAEQNNTSDLPIGVIPVDSLYSPVERVNYTV
ENTRVGQSSDFDKLTLDVWTDGSITPQESVSLAAKILTEHLNIFVGLTDEAKNAEIMIEK
EEDQKEKVLEMSIEELDLSVRSYNCLKRAGINTVQELADKSEADMMKVRNLGRKSLEEVK
YKLEDLGLGLRKED
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatagaaattgaaaaacctagaattgagacaattgaaattagtgaagatgctaaattc
ggtaagtttgttgttgaaccactagaacgtggctatggcactacgctaggaaactcctta
cgtcgtatcctactatcttcattgccaggtgcagctgttaagtacatcgagatcgaaggc
gttctccatgaattctcagcaattgataacgtagtagaagacgtatctacaatcattatg
aatattaagaaacttgctcttaaaatttattctgaagaagataaaacgttagaaatcgat
gttaaagatgaaggcgaagttacagcagcagacattactcacgatagtgatgttgagatt
ttaaacccagagcttaaaattgcgactgtatctaaaggtggacatttaaaaatccgtcta
gttgctaataagggtagaggttacgcattagctgaacaaaataatactagtgatttacca
attggtgttattccagttgactcattatactcaccagtagaaagagttaactatacagtt
gaaaacactcgtgtaggtcaaagtagtgattttgataagttaacattagatgtatggact
gatggttctatcactccacaagaatcagtttcattagcagcaaaaattttaactgaacac
ttgaacatctttgttggattaactgatgaagcaaaaaatgctgaaatcatgattgaaaaa
gaagaagatcaaaaagaaaaagtacttgaaatgtctattgaagaattagacttatcagta
cgttcttataactgcttaaaacgtgcaggaatcaatactgttcaagaattggctgacaaa
tctgaagcagatatgatgaaagtacgtaatttaggtcgtaaatctttagaagaagtaaaa
tataaactcgaagatctaggcttaggtctaagaaaagaagattga
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