Stenotrophomonas cyclobalanopsidis: AB1723_12075
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Entry
AB1723_12075 CDS
T10607
Symbol
smeF
Name
(GenBank) multidrug efflux RND transporter outer membrane subunit SmeF
KO
K18139
outer membrane protein, multidrug efflux system
Organism
scyc Stenotrophomonas cyclobalanopsidis
Pathway
scyc01501
beta-Lactam resistance
scyc02024
Quorum sensing
Module
scyc_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
scyc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AB1723_12075 (smeF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB1723_12075 (smeF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scyc02000
]
AB1723_12075 (smeF)
01504 Antimicrobial resistance genes [BR:
scyc01504
]
AB1723_12075 (smeF)
Transporters [BR:
scyc02000
]
Other transporters
Pores ion channels [TC:
1
]
AB1723_12075 (smeF)
Antimicrobial resistance genes [BR:
scyc01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
AB1723_12075 (smeF)
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
AB1723_12075 (smeF)
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
AB1723_12075 (smeF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF5421
Motif
Other DBs
NCBI-ProteinID:
XCZ89503
LinkDB
All DBs
Position
complement(2625593..2626990)
Genome browser
AA seq
465 aa
AA seq
DB search
MEVPMNKTPLLLALVASLGLAGCSSLAPKNTAVAPAIPSQWPANASQGEVTDVAALGWRD
FFTDERLQQVIGQALDNNRDLRVAVLNVEKARGQYRVQRADRVPGLAATGQMERQGTNAG
VTEQFTAGVGVADFELDLFGRVRNLSESALQQYFAVAANRRNAQLSLVAETATAWLTYGA
DAQQLKISEATLKTYEDSLRLAEARHERGGSSGLELSQTRTLVETARTDAARLRGQLAQD
RNALALLAGGQVDADLLPDSIEPQLLALAPPPAGLPSDVLLQRPDIMAAEHQLLAANANI
GAARAAFFPSITLTGSIGSGSGELSNLFDSGTRVWSFLPKITLPIFQGGKLRANLAVANA
DRDIALAQYEKAIQSGFRETSDALALNVSLDEQVSAQQRLVDAAETANRLSQARYDAGLD
SFVILLDARRTAYSAQQTRLQTELAQQTNRITLYKVLGGGWHERG
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggaggttccgatgaataagacccccttgctgctggcgctcgtcgccagcctgggcctg
gccggctgttccagcctcgcgccgaagaacaccgccgttgccccggccattccatcgcag
tggccggccaacgccagccagggcgaagtgaccgatgttgcggcactgggctggcgcgac
ttcttcaccgatgagcgcctgcagcaggtgatcggccaggcgctggacaacaaccgcgac
ctgcgcgtggcggtgttgaacgtggaaaaggcgcgcggccagtaccgcgtgcagcgcgcc
gaccgcgtgcccggcctggccgctaccggccagatggaacggcagggcaccaatgctggc
gtcaccgagcagttcaccgccggcgtcggcgtggccgatttcgagctggatctgtttggc
cgcgtgcgcaacctcagcgagtctgcgctgcagcagtacttcgccgtggcggccaaccgc
cgcaacgcgcagctgagcctggtggccgagaccgccaccgcatggctgacctacggtgcc
gacgcgcagcagctgaagatttccgaagccacgctgaagacctacgaggattcgctgcgc
ctggccgaggcccgccacgaacgcggcggcagctccgggctggagttgagccagacccgc
acgctggtcgaaaccgcgcgtaccgatgccgcccgcctgcgcgggcagctggcccaggac
cgcaacgcgctggccctgctggccggtggccaggtcgatgcggacctgctgccggacagc
atcgagccgcagctgctggccctggccccgccgccggctggcctgcccagcgacgtgctg
ctgcagcgcccggacatcatggccgccgaacaccagctgctggcggccaacgccaatatc
ggtgccgcgcgtgccgcgttcttccccagcatcaccctgaccggcagcatcggcagtggc
tcgggcgaactgtccaacctgttcgacagcggcacccgcgtgtggagcttcctgccgaag
atcaccttgccgatcttccagggcggcaagctgcgcgcgaacctggcggtggccaatgcg
gatcgcgatatcgccctggcgcagtatgaaaaggcgatccagagtggtttccgcgagacc
tccgacgcgctggcgctgaatgtcagcctggacgagcaggtgagtgcgcagcagcgcctg
gtggatgcggccgaaacggccaaccgcttgtcgcaggcgcgctacgacgccggcctggac
agcttcgtgatcctgctggacgcacgccgcaccgcttacagcgcgcagcagacgcgcctg
cagaccgagctggcccagcagaccaaccgcattaccctgtacaaggtgctgggcggcggc
tggcacgaacgcgggtaa
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