Saccharophagus degradans: Sde_0366
Help
Entry
Sde_0366 CDS
T00335
Name
(GenBank) Type I secretion outer membrane protein, TolC
KO
K12340
outer membrane protein
Organism
sde
Saccharophagus degradans
Pathway
sde01501
beta-Lactam resistance
sde01503
Cationic antimicrobial peptide (CAMP) resistance
sde02020
Two-component system
sde03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sde00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Sde_0366
09132 Signal transduction
02020 Two-component system
Sde_0366
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Sde_0366
01503 Cationic antimicrobial peptide (CAMP) resistance
Sde_0366
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sde02000
]
Sde_0366
02044 Secretion system [BR:
sde02044
]
Sde_0366
01504 Antimicrobial resistance genes [BR:
sde01504
]
Sde_0366
Transporters [BR:
sde02000
]
Other transporters
Pores ion channels [TC:
1
]
Sde_0366
Secretion system [BR:
sde02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
Sde_0366
RTX toxin transporter
Sde_0366
Multiple protein transporter
Sde_0366
RaxAB-RaxC type I secretion system protein
Sde_0366
Antimicrobial resistance genes [BR:
sde01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
Sde_0366
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
Sde_0366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ABD79630
UniProt:
Q21NU9
LinkDB
All DBs
Position
complement(452979..454343)
Genome browser
AA seq
454 aa
AA seq
DB search
MNKSLQKIIALAAFGFAAAAQHSQAETLAEIYQQALENDHSFLAAKAALEAGQENKNIGR
AGLLPQISAEASWADSENTTTEYDINATPTETSTTQNSTTTGYSVSLSQTLFNLASWHTY
KQGKARAQIAEVNYAAAEQEVIVRVAQAYFDALAAVDNFDTAKSEEEALKHQLEQTKQRF
EVGLTAITEVHEAQAAFDSSTATRLAAEGRLGIAFEALEVITGRPYRSLNPMRADFPVTA
PEPADRNQWVEFALANNFDLKAASLNAEAAQQNAKARRADHAPTLTAGVSYSDKTTEIGS
GFETNPENQTLSLTLKVPIYAGGATHASRRQANAQAWESRELFNKAQRDIIQQARSNHLE
VMTGVATVKARKQAITSSESALRATQAGYEVGTRDLVDVLNAQRSLFRARRDYSDALYAY
VVNTLKLKQVAGTLSTADIDALSGWLDTAKEVQY
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtctttacaaaaaattatcgcgctcgcggcctttggatttgccgccgcagct
caacacagccaagcggaaacgctggccgagatataccagcaagcgctcgagaacgatcac
tcattcttggctgccaaagcggcgttagaagcgggccaagaaaacaaaaacattggtcgc
gcaggtttgttgccacaaataagtgccgaagcgagctgggcagatagcgaaaatacaaca
actgaatacgatataaatgctaccccaacagaaaccagcaccacacaaaacagcaccact
accggctatagcgtttcccttagccaaaccttattcaaccttgcaagctggcatacctat
aagcaaggtaaagctagggcgcaaattgctgaggttaactatgctgccgccgagcaagag
gtaatagtgcgggttgctcaagcttattttgatgcattggctgcggtagataatttcgat
acggctaaatctgaagaagaagcgcttaaacatcagttagagcaaaccaaacaacgcttt
gaagtgggcctaaccgccattaccgaagtgcacgaagcgcaagccgctttcgactcttca
accgcaacccgcctagctgctgaaggccgcttaggtattgcattcgaagccttagaagtt
attacgggtcgcccttaccggtcgctcaacccaatgcgtgcagacttccctgtaacggca
ccagaacctgccgatcgcaaccaatgggtagagtttgcattggcaaataactttgattta
aaagcagcgtcacttaatgccgaagccgcacagcaaaatgccaaggcgcgcagagcggat
cacgcaccaacgctaactgcaggcgtaagctattcggataaaaccaccgaaataggtagt
gggttcgaaacaaacccagaaaaccaaacccttagccttactttaaaagtgccaatttat
gccggtggcgccactcatgcttcacgtcgccaagccaatgctcaagcgtgggaatcgcgc
gagcttttcaacaaagcgcagcgagatattattcagcaagcacgctctaaccacttggaa
gtaatgaccggcgtggccactgtaaaagcgcgcaagcaggctattacctctagcgagagc
gccctgcgcgcaacgcaagctggctatgaggtaggcacacgcgatttagtcgacgtacta
aacgcacaacgcagcctattccgcgcccgccgcgactactccgacgcactctacgcttac
gtagttaacaccctcaaactaaaacaagtagcgggcacactttctactgcagatatagac
gcattgagtggctggttggatacggcaaaagaagtgcaatattaa
DBGET
integrated database retrieval system
