Shewanella decolorationis: D0436_04830
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Entry
D0436_04830 CDS
T09167
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sdeo
Shewanella decolorationis
Pathway
sdeo01501
beta-Lactam resistance
sdeo02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdeo00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
D0436_04830
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
D0436_04830
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdeo02000
]
D0436_04830
01504 Antimicrobial resistance genes [BR:
sdeo01504
]
D0436_04830
Transporters [BR:
sdeo02000
]
Other transporters
Pores ion channels [TC:
1
]
D0436_04830
Antimicrobial resistance genes [BR:
sdeo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
D0436_04830
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
D0436_04830
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
D0436_04830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QDZ89849
LinkDB
All DBs
Position
912934..914367
Genome browser
AA seq
477 aa
AA seq
DB search
MNNRVLTHQNELSRRVGSTLKLSVIAIGIALLSGCGALMRSDFEPPALQVPEQWQHTQVN
GQVSLDPWWQKFNQPELNQLISQVLSSNNDLTLATLTLQKARLQAGLARDDLYPQLSSNN
TASVNKPLEGGSSSKAFQANLSVSYEVDLWGKVSANIDQAQWTALASQEDRESTAQSLVA
TTASLYWQIGYLHQRIELSNKSIEHSRQTLALTQRQYASGAVTELNVLESQRSLAGQEAS
HSQLLQQLVEAENALAILLNRAPGQVAVEIKQLPDSAVPEIAVGIPADLVGRRPDVKAAL
YQLRLSLASKDATYASYFPSLSLTGSVGESTSELKELLRNPVGSLGAGLVLPFLQWNQMQ
INNDIADIDYQTAIVNYRKTLYSAFEDVDNAISAKQQYAYQGEKLEQQFSAAAQAEAIYE
SQYRHGAIGIQNWIDAQENRRSAEAALLENRYNQLTAQATLYQALGGSDIAPPIADN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaataatcgagttttaacgcatcaaaatgaattaagccgccgtgtcggttcaacgctt
aagctcagcgtgattgccatcggcattgcgttgctgtcaggctgtggtgcgctgatgcgc
tccgactttgagccgcctgctttacaggtgccagagcagtggcagcacacccaagtaaat
ggtcaagtcagcctagacccttggtggcagaagtttaatcaacccgaattgaatcagctg
attagccaagtgctcagcagcaataatgacctgaccctcgccactttaaccttgcaaaag
gcgcgtttacaggcggggctagcgcgggatgatttgtatccgcagctcagctccaataat
acggcctcagtgaataaaccgctggagggcggcagttcgagcaaggcatttcaggcgaac
ctgtcggtaagctatgaggtggatttgtggggtaaagtgtcggccaatatcgaccaagct
caatggacggcgctggcaagtcaagaagatagggagagcacggcgcagagtctcgtcgcg
acgacggcgtcgctctattggcaaattggctatttgcatcagcggattgaactgagcaat
aagagtattgaacacagtcggcaaacgctggcgctaacccagcgccaatatgcctcgggt
gccgtgacagagctgaatgtgctcgaatcccaacgcagtttagcggggcaagaggcctcc
cacagccaactgctgcaacagttggttgaagcagaaaatgcgctggcgatcttactcaat
cgcgccccggggcaagtggcggttgagattaagcaattgccggacagtgcggtgcctgag
attgctgtcggtattcccgccgacttggtcggccgtcgccccgatgtgaaggcggcccta
tatcaattgcgcttgtcgctggccagtaaggatgcgacctacgccagttacttcccaagc
ttgagtttgaccggcagcgtgggggagtcgacctcagagctaaaagagctattgcgcaat
cccgtggggagtttaggcgcgggcttagtgctgccttttttgcaatggaatcaaatgcaa
attaacaatgatattgccgatatcgactaccaaacggcgattgtgaattaccgtaaaacc
ctctacagcgccttcgaggatgtagataacgccatttcggccaagcagcaatacgcctac
caaggtgagaagcttgagcagcaatttagcgccgccgcccaggccgaagccatttatgag
agccaatatcgccatggcgctatcggcattcaaaattggattgatgcacaggaaaatcgc
cgaagcgccgaggccgcattgctggagaatcgctataaccaattaacggctcaagcgacg
ctctaccaagccctcggtggaagcgatatcgcgccaccgatagcggataactaa
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