Sphingobacterium daejeonense: NCTC13534_00837
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Entry
NCTC13534_00837 CDS
T06632
Symbol
czcC
Name
(GenBank) Cation efflux system protein CzcC
KO
K12340
outer membrane protein
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj01501
beta-Lactam resistance
sdj01503
Cationic antimicrobial peptide (CAMP) resistance
sdj02020
Two-component system
sdj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC13534_00837 (czcC)
09132 Signal transduction
02020 Two-component system
NCTC13534_00837 (czcC)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC13534_00837 (czcC)
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC13534_00837 (czcC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdj02000
]
NCTC13534_00837 (czcC)
02044 Secretion system [BR:
sdj02044
]
NCTC13534_00837 (czcC)
01504 Antimicrobial resistance genes [BR:
sdj01504
]
NCTC13534_00837 (czcC)
Transporters [BR:
sdj02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC13534_00837 (czcC)
Secretion system [BR:
sdj02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NCTC13534_00837 (czcC)
RTX toxin transporter
NCTC13534_00837 (czcC)
Multiple protein transporter
NCTC13534_00837 (czcC)
RaxAB-RaxC type I secretion system protein
NCTC13534_00837 (czcC)
Antimicrobial resistance genes [BR:
sdj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NCTC13534_00837 (czcC)
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NCTC13534_00837 (czcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
VTP90575
LinkDB
All DBs
Position
1:715222..716529
Genome browser
AA seq
435 aa
AA seq
DB search
MKRDLLFVIIFVCCLVSTAKGQGDSLSLADCVKQAIQNNPTLRRDELVVDRSDLAFKQAK
YDRLPTLNANISHDISQGRTINPTTNQYIDQNNSSGRQSLGLNVPIFNGFYIIHNIRMKS
NALDAGKLEYEGYVNDLKLDVITAYVKVLTAKDMLTQTEGQLSVTKEQLHRNEVLNREGA
ANPGDLYDIKGQYSSDLNAVELTRQSLNNARVELAGLMNVDVQSLGELEQIDIPSEISIK
SSEELFQESLTALPQFKAMDYRIKEMEEGIKVAKSNYWPSLSLSGGMSSNYSKEGGAIFN
QIKNNLSKGVGLTLSIPIFNQFKNRTQVRLAEVNLNEVNFTKDIMRNELRMKTAQAVFDL
DITQKNVVNLRDQELSYAESFRIATVHFEAGNSNSVIYLTAKNKLDATRSQLIIKQYEWL
MQKYMNDYYSGSLDL
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagatttactatttgtaatcatatttgtttgttgtttagttagcacggcaaaa
ggacagggagattccttgtccttagccgattgcgttaaacaagcaatccaaaacaaccct
actttgaggcgagatgaattagtcgtcgaccgatctgaccttgcttttaaacaagcgaaa
tacgaccgtttaccaacattgaatgccaatatcagtcatgatatctcgcagggtaggacc
atcaatccgacaaccaatcaatatatagatcagaacaatagctcagggcgtcaatccctg
ggcttaaatgttccgattttcaatggtttttatatcatccataacatccgaatgaaatcg
aacgctttggacgcaggtaaattggaatatgaaggttatgtaaatgacttgaaattggat
gtaattacagcatacgtcaaggttctgacagcaaaagacatgttgacccaaaccgagggt
caattatcggtgactaaggaacagctgcacagaaatgaagttttaaatcgtgaaggtgca
gcaaatcctggtgatctatatgatattaaaggccaatatagcagtgacctgaatgctgta
gaactgacaagacaaagtttgaacaatgcaagggttgagttagctggcctgatgaacgtg
gatgttcaaagtttgggtgagcttgaacagattgatataccttcggaaatatctataaaa
tcatcggaagaattgtttcaagaatctttgacagcattgccacaatttaaagcgatggat
tatagaatcaaagagatggaagagggaattaaggttgccaaatctaattattggccaagt
ctatccttgagtggtgggatgagttccaattacagtaaggaaggtggagcgatttttaat
caaatcaaaaacaatttgagcaaaggtgttggtttaactttgagcattccaatcttcaat
caattcaagaatcgcactcaggttcggttagctgaagttaatttaaatgaggttaatttc
accaaagatattatgaggaatgaattgcggatgaaaactgctcaagctgttttcgattta
gatatcacacagaaaaatgtggtcaatctgcgtgatcaggagttaagttatgcagaatca
tttcggattgctacggtacattttgaggcaggaaacagcaactctgtaatctatttaact
gctaagaataaattggatgccacccgtagtcaattaatcataaagcaatacgagtggttg
atgcaaaaatatatgaatgattattattcgggatctttagatttatag
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