Sphingobacterium daejeonense: NCTC13534_04195
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Entry
NCTC13534_04195 CDS
T06632
Name
(GenBank) type I secretion outer membrane protein, TolC family
KO
K12340
outer membrane protein
Organism
sdj
Sphingobacterium daejeonense
Pathway
sdj01501
beta-Lactam resistance
sdj01503
Cationic antimicrobial peptide (CAMP) resistance
sdj02020
Two-component system
sdj03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sdj00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
NCTC13534_04195
09132 Signal transduction
02020 Two-component system
NCTC13534_04195
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NCTC13534_04195
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC13534_04195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdj02000
]
NCTC13534_04195
02044 Secretion system [BR:
sdj02044
]
NCTC13534_04195
01504 Antimicrobial resistance genes [BR:
sdj01504
]
NCTC13534_04195
Transporters [BR:
sdj02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC13534_04195
Secretion system [BR:
sdj02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
NCTC13534_04195
RTX toxin transporter
NCTC13534_04195
Multiple protein transporter
NCTC13534_04195
RaxAB-RaxC type I secretion system protein
NCTC13534_04195
Antimicrobial resistance genes [BR:
sdj01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
NCTC13534_04195
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
NCTC13534_04195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
VTQ03113
LinkDB
All DBs
Position
1:complement(3478929..3480083)
Genome browser
AA seq
384 aa
AA seq
DB search
MKIIKTITVVCALIFGFNGLTIGQEHALDRYVKQGLDSNLVLIQKDLSMKKAMNGLEVAK
SMYLPQITFDLTYSHADGGRSIDLPIGDMLNPVYATLNQLTQSNNFPQISNEQINFLPKN
YYDAKIRTSVPIINTDIKHNKVVREKMVELTKVETETYKRELVKDIKIAYFNYLSAVQSK
EIYENALTLAKEGKRVNEKLLEAGKGLPAYVIRAEAEIAQHESKIAEAEQQIKNAKYYFN
SLLNRAGDAEIVYESGKERANELEGSDMSVNIDGREEIKSLEGNKAIQESMVEMSKQAFV
PKLSAFLDLGSQAEGLKINSNSQYYMVGAQLSFPIFQGNRNRLKIQENQIAVAEAQNKID
QAKQQLALSAEVAKNELVAMQKKL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataataaaaacaataactgtagtttgtgcccttatatttggatttaatggatta
accattggacaagagcatgctttggatcggtatgtcaaacaaggtttggacagtaacttg
gttttaattcagaaggatctttcaatgaaaaaggccatgaatgggctagaggttgccaag
agcatgtacctgcctcagattacatttgacttgacttattcacatgctgatggtggtcgt
tcgatcgacttgccgatcggcgatatgctgaatcctgtatatgccacattgaaccagttg
acacagagcaataatttcccacagatcagtaacgaacagatcaacttcttgccaaagaat
tattatgatgctaaaatcagaacttccgttccgattatcaacacggatataaaacataat
aaagttgttcgggagaaaatggttgagttgacaaaggttgaaaccgaaacatataagagg
gagcttgtcaaagatatcaagattgcatatttcaattatttgagtgctgttcaatctaaa
gagatttatgaaaatgcgttgactttggccaaggagggcaaaagggttaatgaaaagcta
ttggaggctgggaaagggttgccagcctatgtaatccgtgctgaggcggaaatagctcaa
catgaatcaaaaattgccgaggcggagcaacagatcaaaaatgcgaaatactatttcaat
tcattgttgaatcgtgctggtgatgctgagattgtgtatgaatcgggcaaggaaagggct
aatgagttggaaggttcggacatgtcggtaaatattgatgggcgggaggaaataaaatca
ttggagggaaataaagctattcaggaatctatggttgagatgagcaaacaggcgtttgtc
cctaagttaagtgcttttttggatcttggttcgcaagctgaggggttgaagatcaatagt
aattctcaatattatatggtcggcgcacaattgagtttcccaatttttcaagggaacagg
aaccggttgaaaatccaagaaaaccagattgcagttgctgaagctcagaacaagatagat
caagcgaagcaacagttggcgttatcagcggaggttgcgaagaatgagctagtagcaatg
caaaaaaaactatga
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