Shewanella dokdonensis: KHX94_03895
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Entry
KHX94_03895 CDS
T07469
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K22015
formate dehydrogenase (hydrogenase) / hydrogen-dependent carbon dioxide reductase [EC:
1.17.98.4
1.17.98.5
]
Organism
sdk
Shewanella dokdonensis
Pathway
sdk00680
Methane metabolism
sdk00720
Other carbon fixation pathways
sdk01100
Metabolic pathways
sdk01120
Microbial metabolism in diverse environments
sdk01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09100 Metabolism
09102 Energy metabolism
00720 Other carbon fixation pathways
KHX94_03895 (fdhF)
00680 Methane metabolism
KHX94_03895 (fdhF)
Enzymes [BR:
sdk01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.98 With other, known, physiological acceptors
1.17.98.4 formate dehydrogenase (hydrogenase)
KHX94_03895 (fdhF)
1.17.98.5 hydrogen-dependent carbon dioxide reductase
KHX94_03895 (fdhF)
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GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Motif
Other DBs
NCBI-ProteinID:
QVK23825
UniProt:
A0ABX8DHG7
LinkDB
All DBs
Position
complement(819773..821764)
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AA seq
663 aa
AA seq
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MREPMIRREKGGPFETVSWDEAIKYVAKRFAEIKAKHGARAIMTTGSSRGTGNETNYVMQ
KFARAVLGSNNVDCCARVCHGPSVAGLRETLGNGAMSVSIEDLEQAKCLLIFGYNSADSH
PIVARRIVKAKQNGAKIIVCDPRRIEAARIADQHLQLNNGCNVVMVNAFIYTLLEENLYD
KDYVAKYTEGFDSLWDVVKDYAPEKVEAITGVSAQDIRQAMRTYASSPASVICWGMGVTQ
FGQGTETVKSLSTLALLTGNLGRHGAGVAPVRGQNNVQGGCDMGVLPDLFPGYQKVIDPA
VRAKFAKAWGIDPESMDKDVGVRITQVPHLALEGKVKAYYIMGEDPLQTEADLSLVRKGL
EALDLLVVQDIFMTKTAEAADVILPATSWGEHGGVFTCADRGFQRFEKAIEPKYNVKRDW
DIISLIATEMGYPMHYDNNQQIWDELRELCPLYYGATYEKMGEFGHVQWPCPTLDHPGTP
VLYTDNKFATPSGKGQLFATQWRKPAELTDEEFPLVLCTVREVGHYSCRSMTGNCAALKT
LADEPGLVNINPADAQALGIKDQQLVWVASRRGKVISRANVSDRINRGAVYMTYQWWVGA
CNELTQDNLDPTSKTPETKYCAANVSAIEDQTWAENYAAQVYSEMKARLRHAVEDARPAA
ATA
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagccgatgatccgccgtgaaaaaggtggcccatttgagacagtatcttgggat
gaagccatcaaatacgtggccaaacgttttgccgaaatcaaggcaaaacacggtgcccgc
gccattatgactaccgggtcttcccgcggcacaggtaatgaaaccaattatgtaatgcaa
aagttcgcccgcgcggtgcttggcagcaataacgtcgactgctgtgcccgtgtgtgccac
ggcccatcagttgccgggttgcgtgaaaccttaggcaatggtgccatgagcgtttccatc
gaagatctggaacaggctaaatgtctgttgatctttggttacaacagcgccgattctcac
ccgattgtggcccgccgcattgtgaaggccaaacagaatggtgccaagatcatcgtgtgc
gatccacgccgcattgaagccgcccgtattgctgaccaacatctgcaactgaacaacggt
tgtaacgtggtgatggtcaacgcttttatctacaccttgctggaagaaaacctctacgac
aaagactatgtggccaaatacaccgaaggtttcgacagcttgtgggatgtagtcaaagac
tatgctcctgaaaaagttgaagccattaccggcgtcagcgcccaggatattcgccaagcg
atgcgtacctatgcttcctctcccgcatcggtaatttgttggggcatgggcgtgactcag
tttggtcagggcaccgaaaccgttaagagtctgtcaaccttagcattgctgactggcaac
cttggtcgccatggcgcgggtgtggctcccgttcgtggtcagaacaatgtgcaaggtggc
tgtgatatgggggtactgccagacttattccccggctaccagaaagttatcgatcccgct
gtccgtgctaaatttgctaaggcgtggggcatagatccagaatccatggataaagacgtt
ggcgttcgtatcacccaagtgccacatctagcgctagaaggcaaagtcaaagcctattac
atcatgggtgaagatccgttgcagaccgaagccgatttaagcctggtacgcaagggtctt
gaagcgctggatttgctggtggtacaggacattttcatgaccaaaaccgccgaagctgcg
gacgtgatcctgccggcaacttcctggggtgaacacggtggcgtatttacctgtgctgac
cgcggtttccaacgtttcgaaaaagccattgaacctaaatacaacgttaaacgtgactgg
gacatcatttcactgatcgccactgaaatgggttacccaatgcactacgacaacaaccag
cagatttgggatgaactgcgtgaattgtgcccactgtattacggcgcaacttacgaaaaa
atgggcgaatttggtcatgtacagtggccatgtccaacactggatcatccaggtacgcca
gtgctgtataccgacaataaatttgccacacctagcggtaaagggcagttgtttgccacc
caatggcgcaaacctgctgaactgaccgacgaagaatttccgctggtactgtgtaccgtt
cgtgaagtgggacactattcctgccgctctatgacaggtaactgtgccgccttgaaaacc
ttggcggatgaacctgggctggtcaacatcaatcctgccgatgctcaggcacttggcatc
aaagatcaacaactggtgtgggttgcttcacggcgcggcaaggtgatcagtcgcgctaat
gtcagcgaccgcatcaaccgtggtgccgtgtacatgacttatcagtggtgggttggcgcc
tgcaatgagttgacccaggataacctggaccccacctcaaaaacgccagaaaccaagtac
tgtgcagctaatgtcagtgctatcgaggatcagacctgggcagagaattatgcggcacag
gtctacagcgagatgaaagctcgcttacgccatgctgtggaggacgccaggccagcggcc
gctactgcataa
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