Shewanella dokdonensis: KHX94_08400
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Entry
KHX94_08400 CDS
T07469
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
sdk
Shewanella dokdonensis
Pathway
sdk01501
beta-Lactam resistance
sdk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sdk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KHX94_08400
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
KHX94_08400
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdk02000
]
KHX94_08400
01504 Antimicrobial resistance genes [BR:
sdk01504
]
KHX94_08400
Transporters [BR:
sdk02000
]
Other transporters
Pores ion channels [TC:
1
]
KHX94_08400
Antimicrobial resistance genes [BR:
sdk01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
KHX94_08400
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
KHX94_08400
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
KHX94_08400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Alanine_zipper
Motif
Other DBs
NCBI-ProteinID:
QVK24469
LinkDB
All DBs
Position
1747652..1749052
Genome browser
AA seq
466 aa
AA seq
DB search
MATLPVAHVTDKTLAPPMVTEQWWTAFNDPQLDQLITKMENLSPTLQQAIDRIHIATAKV
GVVGADAKPHLAANGSLGVEHWPEDTHYGAGLNGDTTWNNTAGLAFDYDIDLFKKQDDRE
QQAWAQLQFSRISAQAAQLQLIANIVRSYIGLALAYDQREVQRQRFAQQQEIINLTKQQF
DYGLGSRYDLQQAQAQLPIINSVIRALDEQIALDKNQLVTLVGLPLAESNNIQRPTLMLA
TTLQLPQALPLSLVGNRPDINATRWQIVTEAKGVDLAKANFYPNINLRAGLSQVMTVGDM
TQLVSAENRSYSAGPVISLPIFDGGARRAQLGIASARYDEVVHRYNATLQQALREVSDLL
IQQNSAQDQAVFADDAVARATQVYQTAETAFKQGFRDYLHVLDAQTRLFEQQLTKATVHA
RLLTIEANLAVSLGGGMHYIAPKTEQLQPARLTIQTTDEATACCEK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcaacattacctgtcgcccatgtaacggataagactctggcgccaccaatggtgact
gaacagtggtggacagcattcaatgatccacaactggatcagttgattaccaagatggaa
aatcttagcccaacgttacagcaagccatagatcgcatccatattgccaccgccaaggtg
ggagttgttggtgctgacgccaagccacatcttgctgccaacggcagtctaggcgttgaa
cattggcctgaagacacccactacggtgcgggtttaaatggtgataccacatggaacaat
accgctgggcttgcttttgattacgatatagacctatttaaaaaacaggatgaccgcgag
caacaagcgtgggcgcaactgcaatttagccgcatctccgcccaagccgcgcaattgcaa
ctcatcgctaatattgtacgaagctatattggtctggcgctggcctatgatcagcgagaa
gtgcagcgccaacgtttcgcgcagcagcaagagattattaatttaaccaaacaacaattt
gattatggcttaggctcacgttacgacctgcaacaggctcaagcacagctccccatcatc
aacagtgtaatccgcgccctagatgagcagattgctcttgataaaaaccagctggtgacc
ttggtaggtttaccgctagcagagagtaacaacatacaacgcccaacgttgatgctcgcc
acaacactccaattaccacaggcgttacctttgtcactcgtgggtaatcgcccagatatt
aatgcaacccgctggcaaattgtgaccgaagctaaaggcgttgacttagcgaaagccaat
ttttatcccaatatcaatctgcgagccggcttgagtcaggtgatgacggtaggtgatatg
actcaactcgttagcgccgaaaaccgcagttactctgctggccccgtgatttcactgccc
atttttgatggtggtgcccgccgcgcacaattaggcattgccagcgcacgttatgatgaa
gtcgtgcacagatataacgccacgctacaacaagcgttgcgagaggtatcagacctgctg
atccagcaaaactcggcgcaagatcaagccgtatttgccgatgatgctgttgcacgcgcc
acacaggtttaccaaacagcagaaaccgccttcaagcagggctttcgggattatctacat
gtcttggatgcgcaaacccgcctatttgaacaacagctcaccaaggcaacagttcatgct
cggttactcaccattgaagccaatttggcagtgtcactgggcggcggcatgcactatatc
gcgcccaaaacagaacaactgcaacccgccagattaaccattcagaccactgatgaggca
acagcatgttgcgagaaatag
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