Sphingomonas donggukensis: M9980_05575
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Entry
M9980_05575 CDS
T08944
Name
(GenBank) TolC family outer membrane protein
KO
K12340
outer membrane protein
Organism
sdon
Sphingomonas donggukensis
Pathway
sdon01501
beta-Lactam resistance
sdon01503
Cationic antimicrobial peptide (CAMP) resistance
sdon02020
Two-component system
sdon03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sdon00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
M9980_05575
09132 Signal transduction
02020 Two-component system
M9980_05575
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
M9980_05575
01503 Cationic antimicrobial peptide (CAMP) resistance
M9980_05575
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdon02000
]
M9980_05575
02044 Secretion system [BR:
sdon02044
]
M9980_05575
01504 Antimicrobial resistance genes [BR:
sdon01504
]
M9980_05575
Transporters [BR:
sdon02000
]
Other transporters
Pores ion channels [TC:
1
]
M9980_05575
Secretion system [BR:
sdon02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
M9980_05575
RTX toxin transporter
M9980_05575
Multiple protein transporter
M9980_05575
RaxAB-RaxC type I secretion system protein
M9980_05575
Antimicrobial resistance genes [BR:
sdon01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
M9980_05575
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
M9980_05575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
URW76680
LinkDB
All DBs
Position
complement(1145793..1147343)
Genome browser
AA seq
516 aa
AA seq
DB search
MRRILLSTAASAILCLAGATPATAQTTTLRDALVEAYKTNPTITAQRATQRANDENVPIA
RAAGLPGVTSGGGYSENLYDTAGGAGPLRSATARVDLSVPVYTGGAVRGSVRAAETRVEA
GRATLRGTEADVFTQVVAAYNDVIRDEAIVRLNQLNVRVLQTNLQAARDRFEVGDLTRTD
VAQSEARYSLAEGQLRSAEATLVGSRETYVRVVGSPPGALSPPPTLPNLPTDPQSAVQVA
MANNPDLDAASKQRDATRYDIAVAKSQRLPRVSVSVGSAYQNYLGSVGNQAALAGFRNDS
LGLTGGVNLSLPLFQGGRPAAQVRQAEARRSAAIEQVTDTERFVIARTRSAYANWQSSLQ
VIRSSEIAVDANKLSLEGVRAENSVGTRTILDILNAEQELLNSQVTLVSARRNAYVAGFA
LLAAMGKAEARDLNLDGGPLYDPVVNYDRVRRRISDFGSDGEPAPVATRTSDTAAQTPAV
TVDPALADPALQRPAATMPAQRPVDTRPSNPAGVRR
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgcattcttctatcgaccgcggcgagcgcgatcctgtgtctggccggcgcgacg
cccgcgaccgcccagaccacgacgctgcgcgacgcgctggtcgaggcgtacaagaccaac
ccgacgatcaccgcccagcgcgcgacccagcgcgcgaacgacgagaatgtgccgatcgcc
cgcgccgcgggcctgccgggcgtcacctcgggcggcggctatagcgagaatctctatgac
accgccggcggcgcggggccgttgcgatcggcgacggcgcgggtcgacctgagcgtgccg
gtctataccggcggcgcggtgcgcgggtcggtgcgggcggcggagacgcgcgtcgaggcc
ggtcgcgcgacgttgcgcggtaccgaggcggacgtgttcacgcaggtcgtcgccgcctac
aacgacgtcatccgcgatgaggcgatcgtgcgcctcaatcagctgaacgtccgcgtgctc
cagaccaatctgcaagccgcgcgcgaccggttcgaagtcggcgacctgacccgcaccgat
gtcgcccagtcggaggcgcgctattcgctggccgaggggcagctgcgcagtgccgaggcg
acgctggtcggcagccgcgaaacctatgtgcgggtcgtcggttcgcccccgggcgcgctg
tcgcccccgccgacgctccccaatttgccgaccgatccgcagagcgcggtgcaggtggcg
atggcgaacaatcccgatctggatgcggccagcaagcagcgcgacgccacccgctacgac
atcgccgtggcgaaatcgcagcgcctgccgcgcgtcagcgtcagcgtcgggtcggcgtat
cagaactacctcggctcggtgggtaaccaggccgcgctcgccggtttccgcaacgattcg
ctgggcttgaccggtggcgtgaatctgtcgctgccgctgttccaaggcgggcgcccggcg
gcgcaggtgcgccaggccgaggcgcggcgatcggcggcgatcgagcaggtgaccgacacc
gaacgcttcgtgatcgcgcgcacccgctctgcctacgccaactggcagtcgtcgctgcag
gtgatccgatcgagcgagatcgcggtcgacgcgaacaagctgagcctggagggcgtccgc
gccgagaacagcgtcggcacgcgcacgatcctcgacatcctgaacgccgagcaggaattg
ctgaactcgcaggtcacgctcgtcagcgcgcggcgcaacgcctatgtcgcgggcttcgcg
ctgctggcggcgatgggcaaggccgaggcgcgcgacctgaacctcgatggcgggccgctc
tacgatccggtcgtcaactacgaccgcgttcgccgtcgcatcagcgatttcggcagcgat
ggagagccggcaccggtggcaacccgcaccagcgacaccgcggcgcagacgccggcggtg
acggtcgatccggcgctcgccgatcccgcgctccagcgccccgcggcgacgatgccggca
cagcgcccggttgacacgcgcccctccaatcccgcaggtgttcgccgttaa
DBGET
integrated database retrieval system
