Sulfuricella denitrificans: SCD_n03082
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Entry
SCD_n03082 CDS
T02857
Name
(GenBank) RND family efflux pump outer membrane protein
KO
K12340
outer membrane protein
Organism
sdr
Sulfuricella denitrificans
Pathway
sdr01501
beta-Lactam resistance
sdr01503
Cationic antimicrobial peptide (CAMP) resistance
sdr02020
Two-component system
sdr03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
sdr00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
SCD_n03082
09132 Signal transduction
02020 Two-component system
SCD_n03082
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SCD_n03082
01503 Cationic antimicrobial peptide (CAMP) resistance
SCD_n03082
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sdr02000
]
SCD_n03082
02044 Secretion system [BR:
sdr02044
]
SCD_n03082
01504 Antimicrobial resistance genes [BR:
sdr01504
]
SCD_n03082
Transporters [BR:
sdr02000
]
Other transporters
Pores ion channels [TC:
1
]
SCD_n03082
Secretion system [BR:
sdr02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
SCD_n03082
RTX toxin transporter
SCD_n03082
Multiple protein transporter
SCD_n03082
RaxAB-RaxC type I secretion system protein
SCD_n03082
Antimicrobial resistance genes [BR:
sdr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump AcrEF-TolC [MD:
M00696
]
SCD_n03082
Multidrug resistance, efflux pump MdtEF-TolC [MD:
M00697
]
SCD_n03082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
DUF3117
ALIX_LYPXL_bnd
Motif
Other DBs
NCBI-ProteinID:
BAN36881
UniProt:
S6AKF1
LinkDB
All DBs
Position
pSCD:complement(46909..48207)
Genome browser
AA seq
432 aa
AA seq
DB search
MPVGQAMAAPEADAHAAVVSQPLKQLIAYALAHNPEVAATAFDGQAAAARTQTAQGALLP
RITIEGGYTRYGDDLRLTAARYNGELGVFGDNILAADLVLRLPLYTGGRLTAEMRAAELL
EASAGQRLARSRGELVYNVSSLYYGQLAQARLIDSLNFSAETLASQLERVNALIAARKAA
KVDALRTKVKLADIRQRLLREKNNLAVQRQALLNLMGEGADFTLAGPLDPPAGETRGIET
LAAAALEHRPDALAARAEFEAQTARVEAARAGHQPTVNLVGSVGNRIMNQPTQHPAGLQT
NDDVTRIGITFEMPLYEGGRTSARVDEENAKLGAQRERLVKLQLQIRLEVATAYANLASG
LERLASTGKVIDLAAESQRIEQEKYTLARGTVLDVLDAQSALLDAQANHIRALADANAAA
AQLALATGENLP
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcggccaagccatggctgcgcccgaagcggacgctcatgccgccgtcgttagc
cagcccctgaagcaattgattgcctacgcactcgcccataacccggaagtcgcggcaacg
gcgttcgacggtcaagctgcagcggcgcgcacccagaccgcgcagggcgcccttctgccc
cggatcaccattgagggcggctatacccgctacggcgacgatttgcgtctgaccgccgca
cgctacaacggcgaacttggcgtattcggcgacaatatcctggccgccgacctggtgctg
cgcttgccgctttacactggtgggcggctcactgccgaaatgcgtgcggcggaactgctc
gaagcttcggccgggcagcgtctggcgcgctccaggggcgagctggtctataacgtctcc
agcctttactacggtcaacttgcccaagcgcggctgatcgactcactcaacttttcagct
gaaacgctggcctcccaactcgaacgggtcaatgccctcatcgccgcgcgcaaggcagcg
aaagtggatgccttgcgcaccaaggtgaagcttgccgacatccgccagcggctgttgcgg
gagaagaacaacctggccgtacagcggcaggctttgctcaacctgatgggcgagggggcc
gactttaccttggcgggaccgctggatccacccgccggcgaaacccgtggcattgaaacg
cttgcagcggcggcgctggaacaccgcccggacgcgcttgccgctcgcgcggaattcgaa
gcccaaacggcgcgggtcgaggcggcgcgtgccggacaccagcctacggtcaatctggtc
ggcagcgtgggcaaccgcatcatgaatcagccgacgcagcacccggcggggcttcaaacc
aacgacgacgtgacccgcatcggcatcacctttgagatgccactttacgaaggcggtcgc
accagtgcgcgggtggatgaagaaaacgccaagctgggcgcccagcgcgaacgcctggtc
aagctccagttgcaaattcgcctggaagtggcaaccgcttacgccaacctggcctccggc
ctggagcggctcgccagcaccgggaaggtgatcgacctggctgcggagagccagcgcatc
gagcaggaaaaatacacccttgcccgcggtaccgtgctggatgtgctggatgctcaatcg
gcgctgctggacgcgcaggccaaccacatccgtgcactggcggacgccaatgccgccgcc
gctcaactggccctggccacaggagaaaatctgccatga
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